RNA–Protein interactions for RNA: ENST00000601032.5

LTBP4-229, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 1 (best)

Gene LTBP4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-229ENST00000601032 ERICH3Q5RHP9 1530 aa25.48■■□□□ 1.67
LTBP4-229ENST00000601032 EIF4G3O43432 1585 aaKnown RBP25.44■■□□□ 1.66
LTBP4-229ENST00000601032 ABCA5Q8WWZ7 1642 aa25.42■■□□□ 1.66
LTBP4-229ENST00000601032 GAPVD1Q14C86 1478 aa25.38■■□□□ 1.65
LTBP4-229ENST00000601032 IGF1RP08069 1367 aa25.37■■□□□ 1.65
LTBP4-229ENST00000601032 VPS8Q8N3P4 1428 aa25.36■■□□□ 1.65
LTBP4-229ENST00000601032 PBRM1Q86U86 1689 aa25.31■■□□□ 1.64
LTBP4-229ENST00000601032 ARAP1Q96P48 1450 aa25.3■■□□□ 1.64
LTBP4-229ENST00000601032 APLP2Q06481 763 aa25.27■■□□□ 1.64
LTBP4-229ENST00000601032 ANP32EQ9BTT0 268 aa25.27■■□□□ 1.64
LTBP4-229ENST00000601032 GRIN2BQ13224 1484 aa25.27■■□□□ 1.64
LTBP4-229ENST00000601032 SNAPC4Q5SXM2 1469 aa25.22■■□□□ 1.63
LTBP4-229ENST00000601032 CARMIL1Q5VZK9 1371 aa25.21■■□□□ 1.63
LTBP4-229ENST00000601032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.18■■□□□ 1.62
LTBP4-229ENST00000601032 ARHGAP35Q9NRY4 1499 aa25.16■■□□□ 1.62
LTBP4-229ENST00000601032 MAGI1Q96QZ7 1491 aaPredicted RBP25.13■■□□□ 1.61
LTBP4-229ENST00000601032 ADAMTS12P58397 1594 aa25.13■■□□□ 1.61
LTBP4-229ENST00000601032 CUL7Q14999 1698 aa25.1■■□□□ 1.61
LTBP4-229ENST00000601032 FBLN2P98095 1184 aa25.08■■□□□ 1.61
LTBP4-229ENST00000601032 FHAD1B1AJZ9 1412 aa25.07■■□□□ 1.6
LTBP4-229ENST00000601032 SYNJ2O15056 1496 aa25.05■■□□□ 1.6
LTBP4-229ENST00000601032 CHD1O14646 1710 aa25.03■■□□□ 1.6
LTBP4-229ENST00000601032 CHMP7Q8WUX9 453 aaPredicted RBP25.03■■□□□ 1.6
LTBP4-229ENST00000601032 KANK4Q5T7N3 995 aaPredicted RBP25.02■■□□□ 1.6
LTBP4-229ENST00000601032 CCER1Q8TC90 406 aaPredicted RBP25■■□□□ 1.59
LTBP4-229ENST00000601032 GRIN2AQ12879 1464 aa24.98■■□□□ 1.59
LTBP4-229ENST00000601032 HNRNPUL2Q1KMD3 747 aaKnown RBP24.94■■□□□ 1.58
LTBP4-229ENST00000601032 DIEXFQ68CQ4 756 aaKnown RBP24.93■■□□□ 1.58
LTBP4-229ENST00000601032 CLSPNQ9HAW4 1339 aa24.88■■□□□ 1.57
LTBP4-229ENST00000601032 P3H3Q8IVL6 736 aa24.88■■□□□ 1.57
LTBP4-229ENST00000601032 CEP170Q5SW79 1584 aa24.87■■□□□ 1.57
LTBP4-229ENST00000601032 CTTNBP2Q8WZ74 1663 aa24.85■■□□□ 1.57
LTBP4-229ENST00000601032 NUP160Q12769 1436 aa24.83■■□□□ 1.56
LTBP4-229ENST00000601032 FHOD3Q2V2M9 1422 aa24.8■■□□□ 1.56
LTBP4-229ENST00000601032 OSCARQ8IYS5 282 aa24.78■■□□□ 1.56
LTBP4-229ENST00000601032 PCF11O94913 1555 aaKnown RBP24.77■■□□□ 1.56
LTBP4-229ENST00000601032 TIAM1Q13009 1591 aa24.76■■□□□ 1.55
LTBP4-229ENST00000601032 CLASP1Q7Z460 1538 aa24.72■■□□□ 1.55
LTBP4-229ENST00000601032 KIAA0586Q9BVV6 1533 aa24.72■■□□□ 1.55
LTBP4-229ENST00000601032 EFCAB5A4FU69 1503 aa24.7■■□□□ 1.54
LTBP4-229ENST00000601032 RRBP1Q9P2E9 1410 aaKnown RBP24.7■■□□□ 1.54
LTBP4-229ENST00000601032 IQGAP2Q13576 1575 aa24.68■■□□□ 1.54
LTBP4-229ENST00000601032 MAP3K1Q13233 1512 aa24.68■■□□□ 1.54
LTBP4-229ENST00000601032 LRRC9Q6ZRR7 1453 aa24.65■■□□□ 1.54
LTBP4-229ENST00000601032 CFAP43Q8NDM7 1665 aa24.65■■□□□ 1.54
LTBP4-229ENST00000601032 SAMD9Q5K651 1589 aa24.63■■□□□ 1.53
LTBP4-229ENST00000601032 ATP1B4Q9UN42 357 aaPredicted RBP24.62■■□□□ 1.53
LTBP4-229ENST00000601032 JPH4Q96JJ6 628 aa24.61■■□□□ 1.53
LTBP4-229ENST00000601032 CCNB3Q8WWL7 1395 aa24.59■■□□□ 1.53
LTBP4-229ENST00000601032 CASKIN1Q8WXD9 1431 aa24.59■■□□□ 1.53
LTBP4-229ENST00000601032 FYCO1Q9BQS8 1478 aa24.58■■□□□ 1.53
LTBP4-229ENST00000601032 SHROOM2Q13796 1616 aa24.58■■□□□ 1.52
LTBP4-229ENST00000601032 PHLDB1Q86UU1 1377 aa24.57■■□□□ 1.52
LTBP4-229ENST00000601032 ERCC6L2Q5T890 1561 aa24.55■■□□□ 1.52
LTBP4-229ENST00000601032 UGGT2Q9NYU1 1516 aa24.54■■□□□ 1.52
LTBP4-229ENST00000601032 LRRIQ1Q96JM4 1722 aa24.54■■□□□ 1.52
LTBP4-229ENST00000601032 TSHZ2Q9NRE2 1034 aa24.53■■□□□ 1.52
LTBP4-229ENST00000601032 PRG4Q92954 1404 aaPredicted RBP24.53■■□□□ 1.52
LTBP4-229ENST00000601032 DISP1Q96F81 1524 aa24.51■■□□□ 1.51
LTBP4-229ENST00000601032 FMN1Q68DA7 1419 aa24.5■■□□□ 1.51
LTBP4-229ENST00000601032 ITGAEP38570 1179 aa24.5■■□□□ 1.51
LTBP4-229ENST00000601032 KIAA0556O60303 1618 aa24.45■■□□□ 1.51
LTBP4-229ENST00000601032 DHX57Q6P158 1386 aaKnown RBP24.44■■□□□ 1.5
LTBP4-229ENST00000601032 ARHGEF11O15085 1522 aa24.42■■□□□ 1.5
LTBP4-229ENST00000601032 CARMIL2Q6F5E8 1435 aa24.4■■□□□ 1.5
LTBP4-229ENST00000601032 RIMBP3CA6NJZ7 1639 aa24.36■■□□□ 1.49
LTBP4-229ENST00000601032 RIMBP3BA6NNM3 1639 aa24.36■■□□□ 1.49
LTBP4-229ENST00000601032 RIMBP3Q9UFD9 1639 aa24.36■■□□□ 1.49
LTBP4-229ENST00000601032 FAM50AQ14320 339 aaKnown RBP24.35■■□□□ 1.49
LTBP4-229ENST00000601032 SUPT16HQ9Y5B9 1047 aaKnown RBP24.33■■□□□ 1.49
LTBP4-229ENST00000601032 ZNF316A6NFI3 1004 aaPredicted RBP24.32■■□□□ 1.48
LTBP4-229ENST00000601032 MAGI3Q5TCQ9 1506 aa24.32■■□□□ 1.48
LTBP4-229ENST00000601032 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
LTBP4-229ENST00000601032 MTUS2Q5JR59 1369 aa24.29■■□□□ 1.48
LTBP4-229ENST00000601032 RAB3GAP2Q9H2M9 1393 aa24.29■■□□□ 1.48
LTBP4-229ENST00000601032 PTPRGP23470 1445 aa24.27■■□□□ 1.48
LTBP4-229ENST00000601032 MYT1LQ9UL68 1186 aa24.26■■□□□ 1.47
LTBP4-229ENST00000601032 YTHDC1Q96MU7 727 aaKnown RBP24.25■■□□□ 1.47
LTBP4-229ENST00000601032 NCOA2Q15596 1464 aa24.24■■□□□ 1.47
LTBP4-229ENST00000601032 FGD6Q6ZV73 1430 aa24.24■■□□□ 1.47
LTBP4-229ENST00000601032 PLB1Q6P1J6 1458 aa24.22■■□□□ 1.47
LTBP4-229ENST00000601032 HECW1Q76N89 1606 aa24.22■■□□□ 1.47
LTBP4-229ENST00000601032 CDK13Q14004 1512 aaKnown RBP24.22■■□□□ 1.47
LTBP4-229ENST00000601032 ARID3CA6NKF2 412 aa24.22■■□□□ 1.47
LTBP4-229ENST00000601032 SETD5Q9C0A6 1442 aa24.21■■□□□ 1.47
LTBP4-229ENST00000601032 EHBP1L1Q8N3D4 1523 aa24.2■■□□□ 1.47
LTBP4-229ENST00000601032 CYB5RLQ6IPT4 315 aa24.2■■□□□ 1.47
LTBP4-229ENST00000601032 EPRSP07814 1512 aaKnown RBP24.2■■□□□ 1.46
LTBP4-229ENST00000601032 SUPT6HQ7KZ85 1726 aaKnown RBP24.19■■□□□ 1.46
LTBP4-229ENST00000601032 CCDC18Q5T9S5 1454 aa24.17■■□□□ 1.46
LTBP4-229ENST00000601032 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.17■■□□□ 1.46
LTBP4-229ENST00000601032 PTPRKQ15262 1439 aa24.16■■□□□ 1.46
LTBP4-229ENST00000601032 MAPKBP1O60336 1514 aa24.16■■□□□ 1.46
LTBP4-229ENST00000601032 MYOM3Q5VTT5 1437 aa24.14■■□□□ 1.45
LTBP4-229ENST00000601032 ABCA8O94911 1581 aa24.14■■□□□ 1.45
LTBP4-229ENST00000601032 RAPGEF6Q8TEU7 1601 aa24.12■■□□□ 1.45
LTBP4-229ENST00000601032 UACAQ9BZF9 1416 aa24.12■■□□□ 1.45
LTBP4-229ENST00000601032 ADCY10Q96PN6 1610 aa24.1■■□□□ 1.45
LTBP4-229ENST00000601032 NUP153P49790 1475 aaKnown RBP24.08■■□□□ 1.45
LTBP4-229ENST00000601032 MIER1Q8N108 512 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms