RNA–Protein interactions for RNA: ENST00000601032.5

LTBP4-229, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 1 (best)

Gene LTBP4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-229ENST00000601032 NISCHQ9Y2I1 1504 aa35.94■■■■□ 3.34
LTBP4-229ENST00000601032 CCDC180Q9P1Z9 1646 aa31.62■■■□□ 2.65
LTBP4-229ENST00000601032 ABCC9O60706 1549 aa30.57■■■□□ 2.48
LTBP4-229ENST00000601032 ZCCHC6Q5VYS8 1495 aaKnown RBP30.14■■■□□ 2.42
LTBP4-229ENST00000601032 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
LTBP4-229ENST00000601032 DCAF8L2P0C7V8 631 aa29.93■■■□□ 2.38
LTBP4-229ENST00000601032 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
LTBP4-229ENST00000601032 NACADO15069 1562 aa29.6■■■□□ 2.33
LTBP4-229ENST00000601032 MYO15BQ96JP2 1530 aa29.55■■■□□ 2.32
LTBP4-229ENST00000601032 RB1CC1Q8TDY2 1594 aa29.51■■■□□ 2.31
LTBP4-229ENST00000601032 PELP1Q8IZL8 1130 aaKnown RBP29.13■■■□□ 2.25
LTBP4-229ENST00000601032 SCRIBQ14160 1630 aa29.06■■■□□ 2.24
LTBP4-229ENST00000601032 SUPT5HO00267 1087 aaKnown RBP29.01■■■□□ 2.24
LTBP4-229ENST00000601032 UNC13AQ9UPW8 1703 aa28.98■■■□□ 2.23
LTBP4-229ENST00000601032 PABPN1Q86U42 306 aaKnown RBP eCLIP28.71■■■□□ 2.19
LTBP4-229ENST00000601032 BICRAQ9NZM4 1560 aa28.7■■■□□ 2.19
LTBP4-229ENST00000601032 MYT1Q01538 1121 aa28.53■■■□□ 2.16
LTBP4-229ENST00000601032 RSF1Q96T23 1441 aaPredicted RBP28.04■■■□□ 2.08
LTBP4-229ENST00000601032 CECR2Q9BXF3 1484 aa28.04■■■□□ 2.08
LTBP4-229ENST00000601032 CHIC1Q5VXU3 224 aa28.01■■■□□ 2.07
LTBP4-229ENST00000601032 HRCP23327 699 aa28■■■□□ 2.07
LTBP4-229ENST00000601032 EIF4G1Q04637 1599 aaKnown RBP27.87■■■□□ 2.05
LTBP4-229ENST00000601032 MROH2BQ7Z745 1585 aa27.78■■■□□ 2.04
LTBP4-229ENST00000601032 BAZ1AQ9NRL2 1556 aaPredicted RBP27.78■■■□□ 2.04
LTBP4-229ENST00000601032 SMARCA4P51532 1647 aa27.78■■■□□ 2.04
LTBP4-229ENST00000601032 CC2D2AQ9P2K1 1620 aa27.64■■■□□ 2.02
LTBP4-229ENST00000601032 DNAJC5BQ9UF47 199 aa27.63■■■□□ 2.01
LTBP4-229ENST00000601032 WIZO95785 1651 aa27.62■■■□□ 2.01
LTBP4-229ENST00000601032 ATAD2BQ9ULI0 1458 aa27.48■■□□□ 1.99
LTBP4-229ENST00000601032 PEG3Q9GZU2 1588 aa27.44■■□□□ 1.98
LTBP4-229ENST00000601032 SMARCA2P51531 1590 aa27.41■■□□□ 1.98
LTBP4-229ENST00000601032 NCAPD3P42695 1498 aa27.33■■□□□ 1.97
LTBP4-229ENST00000601032 BAZ1BQ9UIG0 1483 aaKnown RBP27.28■■□□□ 1.96
LTBP4-229ENST00000601032 TTBK1Q5TCY1 1321 aaPredicted RBP27.25■■□□□ 1.95
LTBP4-229ENST00000601032 HMGXB3Q12766 1538 aa27.24■■□□□ 1.95
LTBP4-229ENST00000601032 TOP2AP11388 1531 aaKnown RBP27.16■■□□□ 1.94
LTBP4-229ENST00000601032 LOC105371045A0A1W2PR82 267 aa27.13■■□□□ 1.93
LTBP4-229ENST00000601032 TRIM41Q8WV44 630 aa27.06■■□□□ 1.92
LTBP4-229ENST00000601032 CCDC88BA6NC98 1476 aa27.02■■□□□ 1.92
LTBP4-229ENST00000601032 SCAF1Q9H7N4 1312 aaKnown RBP26.88■■□□□ 1.89
LTBP4-229ENST00000601032 FAM9AQ8IZU1 332 aaPredicted RBP26.83■■□□□ 1.89
LTBP4-229ENST00000601032 PPARGC1BQ86YN6 1023 aaKnown RBP26.82■■□□□ 1.88
LTBP4-229ENST00000601032 ABCC8Q09428 1581 aa26.74■■□□□ 1.87
LTBP4-229ENST00000601032 NESP48681 1621 aa26.66■■□□□ 1.86
LTBP4-229ENST00000601032 EHMT2Q96KQ7 1210 aa26.6■■□□□ 1.85
LTBP4-229ENST00000601032 CADPSQ9ULU8 1353 aa26.59■■□□□ 1.85
LTBP4-229ENST00000601032 CFTRP13569 1480 aa26.56■■□□□ 1.84
LTBP4-229ENST00000601032 LAMC3Q9Y6N6 1575 aa26.51■■□□□ 1.83
LTBP4-229ENST00000601032 PCGF6Q9BYE7 350 aa26.5■■□□□ 1.83
LTBP4-229ENST00000601032 PRDM2Q13029 1718 aa26.38■■□□□ 1.81
LTBP4-229ENST00000601032 SOGA1O94964 1423 aa26.35■■□□□ 1.81
LTBP4-229ENST00000601032 KIF21AQ7Z4S6 1674 aa26.32■■□□□ 1.8
LTBP4-229ENST00000601032 FANCD2Q9BXW9 1451 aa26.31■■□□□ 1.8
LTBP4-229ENST00000601032 WRNQ14191 1432 aaPredicted RBP eCLIP26.31■■□□□ 1.8
LTBP4-229ENST00000601032 PDS5BQ9NTI5 1447 aa26.31■■□□□ 1.8
LTBP4-229ENST00000601032 SYNJ1O43426 1573 aa26.3■■□□□ 1.8
LTBP4-229ENST00000601032 RUSC2Q8N2Y8 1516 aa26.3■■□□□ 1.8
LTBP4-229ENST00000601032 ERCC6Q03468 1493 aa26.24■■□□□ 1.79
LTBP4-229ENST00000601032 ZEB1P37275 1124 aaPredicted RBP26.21■■□□□ 1.79
LTBP4-229ENST00000601032 CEP164Q9UPV0 1460 aa26.2■■□□□ 1.78
LTBP4-229ENST00000601032 ACIN1Q9UKV3 1341 aaKnown RBP26.08■■□□□ 1.77
LTBP4-229ENST00000601032 CSRNP3Q8WYN3 585 aa26.07■■□□□ 1.76
LTBP4-229ENST00000601032 TRIM26Q12899 539 aaPredicted RBP26.06■■□□□ 1.76
LTBP4-229ENST00000601032 URB2Q14146 1524 aaKnown RBP26.05■■□□□ 1.76
LTBP4-229ENST00000601032 EEA1Q15075 1411 aa26.05■■□□□ 1.76
LTBP4-229ENST00000601032 THOC2Q8NI27 1593 aaKnown RBP26.05■■□□□ 1.76
LTBP4-229ENST00000601032 MRC2Q9UBG0 1479 aa26.03■■□□□ 1.76
LTBP4-229ENST00000601032 CUX1P39880 1505 aa26.01■■□□□ 1.75
LTBP4-229ENST00000601032 TOP2BQ02880 1626 aa26.01■■□□□ 1.75
LTBP4-229ENST00000601032 TOPBP1Q92547 1522 aa25.96■■□□□ 1.75
LTBP4-229ENST00000601032 BIVM-ERCC5R4GMW8 1640 aa25.96■■□□□ 1.75
LTBP4-229ENST00000601032 WDR62O43379 1518 aa25.94■■□□□ 1.74
LTBP4-229ENST00000601032 DNMBPQ6XZF7 1577 aa25.94■■□□□ 1.74
LTBP4-229ENST00000601032 TNIKQ9UKE5 1360 aa25.91■■□□□ 1.74
LTBP4-229ENST00000601032 CEP162Q5TB80 1403 aa25.91■■□□□ 1.74
LTBP4-229ENST00000601032 GOLGA3Q08378 1498 aa25.87■■□□□ 1.73
LTBP4-229ENST00000601032 CENPBP07199 599 aaPredicted RBP25.86■■□□□ 1.73
LTBP4-229ENST00000601032 UBTFP17480 764 aaKnown RBP25.85■■□□□ 1.73
LTBP4-229ENST00000601032 BCL11AQ9H165 835 aa25.85■■□□□ 1.73
LTBP4-229ENST00000601032 FGD5Q6ZNL6 1462 aa25.82■■□□□ 1.72
LTBP4-229ENST00000601032 KIF21BO75037 1637 aa25.82■■□□□ 1.72
LTBP4-229ENST00000601032 POLA1P09884 1462 aaPredicted RBP25.8■■□□□ 1.72
LTBP4-229ENST00000601032 CUX2O14529 1486 aa25.75■■□□□ 1.71
LTBP4-229ENST00000601032 RAPGEF2Q9Y4G8 1499 aa25.74■■□□□ 1.71
LTBP4-229ENST00000601032 RAD54L2Q9Y4B4 1467 aa25.73■■□□□ 1.71
LTBP4-229ENST00000601032 NEUROD1Q13562 356 aa25.73■■□□□ 1.71
LTBP4-229ENST00000601032 GTF3C3Q9Y5Q9 886 aa25.71■■□□□ 1.71
LTBP4-229ENST00000601032 PRKCSHP14314 528 aaPredicted RBP25.68■■□□□ 1.7
LTBP4-229ENST00000601032 TARBP1Q13395 1621 aaKnown RBP25.64■■□□□ 1.7
LTBP4-229ENST00000601032 IFT140Q96RY7 1462 aa25.6■■□□□ 1.69
LTBP4-229ENST00000601032 ERICH6Q7L0X2 663 aa25.58■■□□□ 1.69
LTBP4-229ENST00000601032 PRXQ9BXM0 1461 aa25.57■■□□□ 1.68
LTBP4-229ENST00000601032 ZNF608Q9ULD9 1512 aaPredicted RBP25.57■■□□□ 1.68
LTBP4-229ENST00000601032 WDR97A6NE52 1622 aa25.56■■□□□ 1.68
LTBP4-229ENST00000601032 ABCA10Q8WWZ4 1543 aa25.55■■□□□ 1.68
LTBP4-229ENST00000601032 CLIP1P30622 1438 aa25.54■■□□□ 1.68
LTBP4-229ENST00000601032 TDRD9Q8NDG6 1382 aaKnown RBP25.53■■□□□ 1.68
LTBP4-229ENST00000601032 KIF27Q86VH2 1401 aa25.53■■□□□ 1.68
LTBP4-229ENST00000601032 RANGAP1P46060 587 aaPredicted RBP25.49■■□□□ 1.67
LTBP4-229ENST00000601032 AQRO60306 1485 aaKnown RBP eCLIP25.49■■□□□ 1.675e-7■■■□□ 15.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms