RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 VPS8Q8N3P4 1428 aa18.03■□□□□ 0.48
SMAD4-205ENST00000588745 GRIN2AQ12879 1464 aa18.03■□□□□ 0.48
SMAD4-205ENST00000588745 RANGAP1P46060 587 aaPredicted RBP18.03■□□□□ 0.48
SMAD4-205ENST00000588745 EFCAB5A4FU69 1503 aa18.02■□□□□ 0.47
SMAD4-205ENST00000588745 IQGAP2Q13576 1575 aa17.97■□□□□ 0.47
SMAD4-205ENST00000588745 SAMD9Q5K651 1589 aa17.96■□□□□ 0.47
SMAD4-205ENST00000588745 CEP170Q5SW79 1584 aa17.93■□□□□ 0.46
SMAD4-205ENST00000588745 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
SMAD4-205ENST00000588745 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
SMAD4-205ENST00000588745 NUP160Q12769 1436 aa17.9■□□□□ 0.46
SMAD4-205ENST00000588745 CHD1O14646 1710 aa17.89■□□□□ 0.45
SMAD4-205ENST00000588745 UGGT2Q9NYU1 1516 aa17.88■□□□□ 0.45
SMAD4-205ENST00000588745 FHOD3Q2V2M9 1422 aa17.87■□□□□ 0.45
SMAD4-205ENST00000588745 FBLN2P98095 1184 aa17.85■□□□□ 0.45
SMAD4-205ENST00000588745 PCF11O94913 1555 aaKnown RBP17.83■□□□□ 0.44
SMAD4-205ENST00000588745 KIAA0556O60303 1618 aa17.81■□□□□ 0.44
SMAD4-205ENST00000588745 FMN1Q68DA7 1419 aa17.8■□□□□ 0.44
SMAD4-205ENST00000588745 P3H3Q8IVL6 736 aa17.79■□□□□ 0.44
SMAD4-205ENST00000588745 FYCO1Q9BQS8 1478 aa17.79■□□□□ 0.44
SMAD4-205ENST00000588745 DISP1Q96F81 1524 aa17.78■□□□□ 0.44
SMAD4-205ENST00000588745 APLP2Q06481 763 aa17.77■□□□□ 0.43
SMAD4-205ENST00000588745 TRIM26Q12899 539 aaPredicted RBP17.77■□□□□ 0.43
SMAD4-205ENST00000588745 PPARGC1BQ86YN6 1023 aaKnown RBP17.77■□□□□ 0.43
SMAD4-205ENST00000588745 CASKIN1Q8WXD9 1431 aa17.75■□□□□ 0.43
SMAD4-205ENST00000588745 CFAP43Q8NDM7 1665 aa17.75■□□□□ 0.43
SMAD4-205ENST00000588745 MAP3K1Q13233 1512 aa17.75■□□□□ 0.43
SMAD4-205ENST00000588745 TIAM1Q13009 1591 aa17.74■□□□□ 0.43
SMAD4-205ENST00000588745 PCGF6Q9BYE7 350 aa17.71■□□□□ 0.43
SMAD4-205ENST00000588745 SHROOM2Q13796 1616 aa17.7■□□□□ 0.42
SMAD4-205ENST00000588745 CLASP1Q7Z460 1538 aa17.68■□□□□ 0.42
SMAD4-205ENST00000588745 CARMIL2Q6F5E8 1435 aa17.68■□□□□ 0.42
SMAD4-205ENST00000588745 HECW1Q76N89 1606 aa17.68■□□□□ 0.42
SMAD4-205ENST00000588745 TTBK1Q5TCY1 1321 aaPredicted RBP17.67■□□□□ 0.42
SMAD4-205ENST00000588745 JPH4Q96JJ6 628 aa17.66■□□□□ 0.42
SMAD4-205ENST00000588745 LRRIQ1Q96JM4 1722 aa17.66■□□□□ 0.42
SMAD4-205ENST00000588745 LRRC9Q6ZRR7 1453 aa17.62■□□□□ 0.41
SMAD4-205ENST00000588745 RAPGEF6Q8TEU7 1601 aa17.61■□□□□ 0.41
SMAD4-205ENST00000588745 PRG4Q92954 1404 aaPredicted RBP17.61■□□□□ 0.41
SMAD4-205ENST00000588745 CCDC18Q5T9S5 1454 aa17.61■□□□□ 0.41
SMAD4-205ENST00000588745 KANK4Q5T7N3 995 aaPredicted RBP17.61■□□□□ 0.41
SMAD4-205ENST00000588745 ATP1B4Q9UN42 357 aaPredicted RBP17.59■□□□□ 0.41
SMAD4-205ENST00000588745 EPRSP07814 1512 aaKnown RBP17.56■□□□□ 0.4
SMAD4-205ENST00000588745 NUP153P49790 1475 aaKnown RBP17.55■□□□□ 0.4
SMAD4-205ENST00000588745 ABCA8O94911 1581 aa17.54■□□□□ 0.4
SMAD4-205ENST00000588745 EHBP1L1Q8N3D4 1523 aa17.54■□□□□ 0.4
SMAD4-205ENST00000588745 ERCC6L2Q5T890 1561 aa17.53■□□□□ 0.4
SMAD4-205ENST00000588745 PLB1Q6P1J6 1458 aa17.52■□□□□ 0.4
SMAD4-205ENST00000588745 CDK13Q14004 1512 aaKnown RBP17.52■□□□□ 0.4
SMAD4-205ENST00000588745 MAGI3Q5TCQ9 1506 aa17.49■□□□□ 0.39
SMAD4-205ENST00000588745 PTPRGP23470 1445 aa17.49■□□□□ 0.39
SMAD4-205ENST00000588745 MTUS2Q5JR59 1369 aa17.49■□□□□ 0.39
SMAD4-205ENST00000588745 RRBP1Q9P2E9 1410 aaKnown RBP17.48■□□□□ 0.39
SMAD4-205ENST00000588745 SUPT6HQ7KZ85 1726 aaKnown RBP17.47■□□□□ 0.39
SMAD4-205ENST00000588745 PHLDB1Q86UU1 1377 aa17.44■□□□□ 0.38
SMAD4-205ENST00000588745 OSCARQ8IYS5 282 aa17.42■□□□□ 0.38
SMAD4-205ENST00000588745 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
SMAD4-205ENST00000588745 NCOA2Q15596 1464 aa17.42■□□□□ 0.38
SMAD4-205ENST00000588745 UACAQ9BZF9 1416 aa17.41■□□□□ 0.38
SMAD4-205ENST00000588745 ABCC2Q92887 1545 aa17.4■□□□□ 0.38
SMAD4-205ENST00000588745 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
SMAD4-205ENST00000588745 ARID3CA6NKF2 412 aa17.4■□□□□ 0.38
SMAD4-205ENST00000588745 ATP10BO94823 1461 aa17.37■□□□□ 0.37
SMAD4-205ENST00000588745 ADCY10Q96PN6 1610 aa17.37■□□□□ 0.37
SMAD4-205ENST00000588745 CDK11AQ9UQ88 783 aaPredicted RBP17.36■□□□□ 0.37
SMAD4-205ENST00000588745 TROQ12816 1431 aaPredicted RBP17.36■□□□□ 0.37
SMAD4-205ENST00000588745 UHRF1BP1LA0JNW5 1464 aa17.35■□□□□ 0.37
SMAD4-205ENST00000588745 MYOM3Q5VTT5 1437 aa17.35■□□□□ 0.37
SMAD4-205ENST00000588745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.34■□□□□ 0.37
SMAD4-205ENST00000588745 HNRNPUL2Q1KMD3 747 aaKnown RBP17.34■□□□□ 0.37
SMAD4-205ENST00000588745 FGD6Q6ZV73 1430 aa17.34■□□□□ 0.37
SMAD4-205ENST00000588745 KIF14Q15058 1648 aa17.3■□□□□ 0.36
SMAD4-205ENST00000588745 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.3■□□□□ 0.36
SMAD4-205ENST00000588745 ZCCHC11Q5TAX3 1644 aaKnown RBP17.29■□□□□ 0.36
SMAD4-205ENST00000588745 KDM5BQ9UGL1 1544 aa17.28■□□□□ 0.36
SMAD4-205ENST00000588745 PTPN23Q9H3S7 1636 aa17.28■□□□□ 0.36
SMAD4-205ENST00000588745 ITSN2Q9NZM3 1697 aa17.27■□□□□ 0.36
SMAD4-205ENST00000588745 TCOF1Q13428 1488 aaKnown RBP17.26■□□□□ 0.35
SMAD4-205ENST00000588745 MIA2Q96PC5 1412 aa17.26■□□□□ 0.35
SMAD4-205ENST00000588745 PLEKHD1A6NEE1 506 aa17.25■□□□□ 0.35
SMAD4-205ENST00000588745 FAM50AQ14320 339 aaKnown RBP17.23■□□□□ 0.35
SMAD4-205ENST00000588745 ABCC10Q5T3U5 1492 aa17.23■□□□□ 0.35
SMAD4-205ENST00000588745 CDC42BPAQ5VT25 1732 aa17.2■□□□□ 0.34
SMAD4-205ENST00000588745 GPATCH8Q9UKJ3 1502 aaKnown RBP17.19■□□□□ 0.34
SMAD4-205ENST00000588745 HRCP23327 699 aa17.16■□□□□ 0.34
SMAD4-205ENST00000588745 RIMBP3CA6NJZ7 1639 aa17.16■□□□□ 0.34
SMAD4-205ENST00000588745 RIMBP3BA6NNM3 1639 aa17.16■□□□□ 0.34
SMAD4-205ENST00000588745 PREX2Q70Z35 1606 aa17.16■□□□□ 0.34
SMAD4-205ENST00000588745 RIMBP3Q9UFD9 1639 aa17.16■□□□□ 0.34
SMAD4-205ENST00000588745 ITGAEP38570 1179 aa17.15■□□□□ 0.34
SMAD4-205ENST00000588745 TTC37Q6PGP7 1564 aa17.15■□□□□ 0.34
SMAD4-205ENST00000588745 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.14■□□□□ 0.33
SMAD4-205ENST00000588745 CAMSAP2Q08AD1 1489 aa17.14■□□□□ 0.33
SMAD4-205ENST00000588745 WDR7Q9Y4E6 1490 aa17.12■□□□□ 0.33
SMAD4-205ENST00000588745 DNMT1P26358 1616 aaKnown RBP17.12■□□□□ 0.33
SMAD4-205ENST00000588745 MYO5CQ9NQX4 1742 aa17.11■□□□□ 0.33
SMAD4-205ENST00000588745 PTPRKQ15262 1439 aa17.11■□□□□ 0.33
SMAD4-205ENST00000588745 CDC42BPBQ9Y5S2 1711 aa17.1■□□□□ 0.33
SMAD4-205ENST00000588745 CFDP1Q9UEE9 299 aaPredicted RBP17.1■□□□□ 0.33
SMAD4-205ENST00000588745 DAPK1P53355 1430 aa17.07■□□□□ 0.32
SMAD4-205ENST00000588745 CROCC2H7BZ55 1655 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms