RNA–Protein interactions for RNA: ENST00000588731.6

SUGP1-209, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 1 (best)

Gene SUGP1, Length 2,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-209ENST00000588731 SYNJ2O15056 1496 aa24.92■■□□□ 1.58
SUGP1-209ENST00000588731 GRIN2AQ12879 1464 aa24.92■■□□□ 1.58
SUGP1-209ENST00000588731 ARAP1Q96P48 1450 aa24.92■■□□□ 1.58
SUGP1-209ENST00000588731 CTTNBP2Q8WZ74 1663 aa24.9■■□□□ 1.58
SUGP1-209ENST00000588731 PPARGC1BQ86YN6 1023 aaKnown RBP24.89■■□□□ 1.58
SUGP1-209ENST00000588731 P3H3Q8IVL6 736 aa24.89■■□□□ 1.57
SUGP1-209ENST00000588731 VPS8Q8N3P4 1428 aa24.85■■□□□ 1.57
SUGP1-209ENST00000588731 CEP170Q5SW79 1584 aa24.77■■□□□ 1.56
SUGP1-209ENST00000588731 KIAA0586Q9BVV6 1533 aa24.77■■□□□ 1.56
SUGP1-209ENST00000588731 IQGAP2Q13576 1575 aa24.76■■□□□ 1.55
SUGP1-209ENST00000588731 FHOD3Q2V2M9 1422 aa24.76■■□□□ 1.55
SUGP1-209ENST00000588731 NUP160Q12769 1436 aa24.75■■□□□ 1.55
SUGP1-209ENST00000588731 TTBK1Q5TCY1 1321 aaPredicted RBP24.7■■□□□ 1.55
SUGP1-209ENST00000588731 EFCAB5A4FU69 1503 aa24.7■■□□□ 1.55
SUGP1-209ENST00000588731 SAMD9Q5K651 1589 aa24.69■■□□□ 1.54
SUGP1-209ENST00000588731 CHD1O14646 1710 aa24.68■■□□□ 1.54
SUGP1-209ENST00000588731 JPH4Q96JJ6 628 aa24.65■■□□□ 1.54
SUGP1-209ENST00000588731 UGGT2Q9NYU1 1516 aa24.65■■□□□ 1.54
SUGP1-209ENST00000588731 PCGF6Q9BYE7 350 aa24.63■■□□□ 1.53
SUGP1-209ENST00000588731 DISP1Q96F81 1524 aa24.6■■□□□ 1.53
SUGP1-209ENST00000588731 APLP2Q06481 763 aa24.6■■□□□ 1.53
SUGP1-209ENST00000588731 TRIM26Q12899 539 aaPredicted RBP24.56■■□□□ 1.52
SUGP1-209ENST00000588731 ATP1B4Q9UN42 357 aaPredicted RBP24.56■■□□□ 1.52
SUGP1-209ENST00000588731 KANK4Q5T7N3 995 aaPredicted RBP24.55■■□□□ 1.52
SUGP1-209ENST00000588731 FMN1Q68DA7 1419 aa24.55■■□□□ 1.52
SUGP1-209ENST00000588731 PCF11O94913 1555 aaKnown RBP24.52■■□□□ 1.52
SUGP1-209ENST00000588731 KIAA0556O60303 1618 aa24.51■■□□□ 1.51
SUGP1-209ENST00000588731 CASKIN1Q8WXD9 1431 aa24.5■■□□□ 1.51
SUGP1-209ENST00000588731 PRG4Q92954 1404 aaPredicted RBP24.46■■□□□ 1.51
SUGP1-209ENST00000588731 FYCO1Q9BQS8 1478 aa24.45■■□□□ 1.5
SUGP1-209ENST00000588731 CARMIL2Q6F5E8 1435 aa24.44■■□□□ 1.5
SUGP1-209ENST00000588731 CLASP1Q7Z460 1538 aa24.4■■□□□ 1.5
SUGP1-209ENST00000588731 TIAM1Q13009 1591 aa24.39■■□□□ 1.49
SUGP1-209ENST00000588731 ARID3CA6NKF2 412 aa24.38■■□□□ 1.49
SUGP1-209ENST00000588731 SHROOM2Q13796 1616 aa24.37■■□□□ 1.49
SUGP1-209ENST00000588731 MAP3K1Q13233 1512 aa24.36■■□□□ 1.49
SUGP1-209ENST00000588731 ERCC6L2Q5T890 1561 aa24.35■■□□□ 1.49
SUGP1-209ENST00000588731 OSCARQ8IYS5 282 aa24.35■■□□□ 1.49
SUGP1-209ENST00000588731 LRRIQ1Q96JM4 1722 aa24.34■■□□□ 1.49
SUGP1-209ENST00000588731 PLB1Q6P1J6 1458 aa24.33■■□□□ 1.49
SUGP1-209ENST00000588731 LRRC9Q6ZRR7 1453 aa24.32■■□□□ 1.48
SUGP1-209ENST00000588731 PTPRGP23470 1445 aa24.29■■□□□ 1.48
SUGP1-209ENST00000588731 CFAP43Q8NDM7 1665 aa24.28■■□□□ 1.48
SUGP1-209ENST00000588731 NUP153P49790 1475 aaKnown RBP24.27■■□□□ 1.48
SUGP1-209ENST00000588731 EPRSP07814 1512 aaKnown RBP24.27■■□□□ 1.48
SUGP1-209ENST00000588731 CDK13Q14004 1512 aaKnown RBP24.25■■□□□ 1.47
SUGP1-209ENST00000588731 HECW1Q76N89 1606 aa24.25■■□□□ 1.47
SUGP1-209ENST00000588731 RAPGEF6Q8TEU7 1601 aa24.24■■□□□ 1.47
SUGP1-209ENST00000588731 MTUS2Q5JR59 1369 aa24.21■■□□□ 1.47
SUGP1-209ENST00000588731 CCDC18Q5T9S5 1454 aa24.2■■□□□ 1.46
SUGP1-209ENST00000588731 MAGI3Q5TCQ9 1506 aa24.2■■□□□ 1.46
SUGP1-209ENST00000588731 ABCA8O94911 1581 aa24.18■■□□□ 1.46
SUGP1-209ENST00000588731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.18■■□□□ 1.46
SUGP1-209ENST00000588731 HNRNPUL2Q1KMD3 747 aaKnown RBP24.18■■□□□ 1.46
SUGP1-209ENST00000588731 PHLDB1Q86UU1 1377 aa24.17■■□□□ 1.46
SUGP1-209ENST00000588731 UACAQ9BZF9 1416 aa24.11■■□□□ 1.45
SUGP1-209ENST00000588731 ATP10BO94823 1461 aa24.1■■□□□ 1.45
SUGP1-209ENST00000588731 RRBP1Q9P2E9 1410 aaKnown RBP24.08■■□□□ 1.45
SUGP1-209ENST00000588731 NCOA2Q15596 1464 aa24.06■■□□□ 1.44
SUGP1-209ENST00000588731 EHBP1L1Q8N3D4 1523 aa24.06■■□□□ 1.44
SUGP1-209ENST00000588731 CDK11AQ9UQ88 783 aaPredicted RBP24.05■■□□□ 1.44
SUGP1-209ENST00000588731 CCNB3Q8WWL7 1395 aa24.05■■□□□ 1.44
SUGP1-209ENST00000588731 ABCC2Q92887 1545 aa24■■□□□ 1.43
SUGP1-209ENST00000588731 SUPT6HQ7KZ85 1726 aaKnown RBP23.99■■□□□ 1.43
SUGP1-209ENST00000588731 PLEKHD1A6NEE1 506 aa23.99■■□□□ 1.43
SUGP1-209ENST00000588731 ARHGEF11O15085 1522 aa23.99■■□□□ 1.43
SUGP1-209ENST00000588731 TROQ12816 1431 aaPredicted RBP23.97■■□□□ 1.43
SUGP1-209ENST00000588731 FAM50AQ14320 339 aaKnown RBP23.96■■□□□ 1.43
SUGP1-209ENST00000588731 ITGAEP38570 1179 aa23.95■■□□□ 1.42
SUGP1-209ENST00000588731 FGD6Q6ZV73 1430 aa23.94■■□□□ 1.42
SUGP1-209ENST00000588731 MYOM3Q5VTT5 1437 aa23.93■■□□□ 1.42
SUGP1-209ENST00000588731 UHRF1BP1LA0JNW5 1464 aa23.93■■□□□ 1.42
SUGP1-209ENST00000588731 KIF14Q15058 1648 aa23.89■■□□□ 1.42
SUGP1-209ENST00000588731 ADCY10Q96PN6 1610 aa23.89■■□□□ 1.42
SUGP1-209ENST00000588731 KDM5BQ9UGL1 1544 aa23.88■■□□□ 1.41
SUGP1-209ENST00000588731 ZCCHC11Q5TAX3 1644 aaKnown RBP23.84■■□□□ 1.41
SUGP1-209ENST00000588731 KCNH8Q96L42 1107 aa23.82■■□□□ 1.4
SUGP1-209ENST00000588731 ZNF644Q9H582 1327 aaPredicted RBP23.81■■□□□ 1.4
SUGP1-209ENST00000588731 CYB5RLQ6IPT4 315 aa23.81■■□□□ 1.4
SUGP1-209ENST00000588731 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.81■■□□□ 1.42e-9■■□□□ 11.5
SUGP1-209ENST00000588731 GPATCH8Q9UKJ3 1502 aaKnown RBP23.8■■□□□ 1.4
SUGP1-209ENST00000588731 ABCC10Q5T3U5 1492 aa23.8■■□□□ 1.4
SUGP1-209ENST00000588731 PTPN23Q9H3S7 1636 aa23.78■■□□□ 1.4
SUGP1-209ENST00000588731 MIA2Q96PC5 1412 aa23.78■■□□□ 1.4
SUGP1-209ENST00000588731 CFDP1Q9UEE9 299 aaPredicted RBP23.77■■□□□ 1.4
SUGP1-209ENST00000588731 RIMBP3CA6NJZ7 1639 aa23.75■■□□□ 1.39
SUGP1-209ENST00000588731 RIMBP3BA6NNM3 1639 aa23.75■■□□□ 1.39
SUGP1-209ENST00000588731 RIMBP3Q9UFD9 1639 aa23.75■■□□□ 1.39
SUGP1-209ENST00000588731 PTPRKQ15262 1439 aa23.75■■□□□ 1.39
SUGP1-209ENST00000588731 TCOF1Q13428 1488 aaKnown RBP23.73■■□□□ 1.39
SUGP1-209ENST00000588731 ZNF777Q9ULD5 760 aaPredicted RBP23.72■■□□□ 1.39
SUGP1-209ENST00000588731 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.7■■□□□ 1.38
SUGP1-209ENST00000588731 CDC42BPAQ5VT25 1732 aa23.69■■□□□ 1.38
SUGP1-209ENST00000588731 NPM1P06748 294 aaKnown RBP eCLIP23.69■■□□□ 1.38
SUGP1-209ENST00000588731 HRCP23327 699 aa23.69■■□□□ 1.38
SUGP1-209ENST00000588731 TTC37Q6PGP7 1564 aa23.67■■□□□ 1.38
SUGP1-209ENST00000588731 ASXL2Q76L83 1435 aa23.67■■□□□ 1.38
SUGP1-209ENST00000588731 WDR7Q9Y4E6 1490 aa23.66■■□□□ 1.38
SUGP1-209ENST00000588731 CHIC2Q9UKJ5 165 aa23.66■■□□□ 1.38
SUGP1-209ENST00000588731 CCER1Q8TC90 406 aaPredicted RBP23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms