RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 CHMP7Q8WUX9 453 aaPredicted RBP9.77□□□□□ -0.85
RNU4ATAC-201ENST00000580972 MAGI1Q96QZ7 1491 aaPredicted RBP9.76□□□□□ -0.85
RNU4ATAC-201ENST00000580972 PBRM1Q86U86 1689 aa9.76□□□□□ -0.85
RNU4ATAC-201ENST00000580972 TTBK1Q5TCY1 1321 aaPredicted RBP9.76□□□□□ -0.85
RNU4ATAC-201ENST00000580972 SYNJ2O15056 1496 aa9.75□□□□□ -0.85
RNU4ATAC-201ENST00000580972 GRIN2AQ12879 1464 aa9.75□□□□□ -0.85
RNU4ATAC-201ENST00000580972 FHOD3Q2V2M9 1422 aa9.74□□□□□ -0.85
RNU4ATAC-201ENST00000580972 VPS8Q8N3P4 1428 aa9.72□□□□□ -0.85
RNU4ATAC-201ENST00000580972 NUP160Q12769 1436 aa9.7□□□□□ -0.86
RNU4ATAC-201ENST00000580972 CEP170Q5SW79 1584 aa9.7□□□□□ -0.86
RNU4ATAC-201ENST00000580972 KIAA0586Q9BVV6 1533 aa9.68□□□□□ -0.86
RNU4ATAC-201ENST00000580972 IQGAP2Q13576 1575 aa9.65□□□□□ -0.86
RNU4ATAC-201ENST00000580972 KANK4Q5T7N3 995 aaPredicted RBP9.64□□□□□ -0.87
RNU4ATAC-201ENST00000580972 JPH4Q96JJ6 628 aa9.64□□□□□ -0.87
RNU4ATAC-201ENST00000580972 ATP1B4Q9UN42 357 aaPredicted RBP9.64□□□□□ -0.87
RNU4ATAC-201ENST00000580972 DISP1Q96F81 1524 aa9.64□□□□□ -0.87
RNU4ATAC-201ENST00000580972 UGGT2Q9NYU1 1516 aa9.63□□□□□ -0.87
RNU4ATAC-201ENST00000580972 ARID3CA6NKF2 412 aa9.63□□□□□ -0.87
RNU4ATAC-201ENST00000580972 EFCAB5A4FU69 1503 aa9.62□□□□□ -0.87
RNU4ATAC-201ENST00000580972 PCGF6Q9BYE7 350 aa9.62□□□□□ -0.87
RNU4ATAC-201ENST00000580972 SAMD9Q5K651 1589 aa9.62□□□□□ -0.87
RNU4ATAC-201ENST00000580972 PRG4Q92954 1404 aaPredicted RBP9.6□□□□□ -0.87
RNU4ATAC-201ENST00000580972 CTTNBP2Q8WZ74 1663 aa9.6□□□□□ -0.87
RNU4ATAC-201ENST00000580972 PCF11O94913 1555 aaKnown RBP9.59□□□□□ -0.87
RNU4ATAC-201ENST00000580972 CASKIN1Q8WXD9 1431 aa9.58□□□□□ -0.88
RNU4ATAC-201ENST00000580972 APLP2Q06481 763 aa9.58□□□□□ -0.88
RNU4ATAC-201ENST00000580972 ERCC6L2Q5T890 1561 aa9.58□□□□□ -0.88
RNU4ATAC-201ENST00000580972 KIAA0556O60303 1618 aa9.57□□□□□ -0.88
RNU4ATAC-201ENST00000580972 FMN1Q68DA7 1419 aa9.56□□□□□ -0.88
RNU4ATAC-201ENST00000580972 CHD1O14646 1710 aa9.56□□□□□ -0.88
RNU4ATAC-201ENST00000580972 TRIM26Q12899 539 aaPredicted RBP9.56□□□□□ -0.88
RNU4ATAC-201ENST00000580972 CLASP1Q7Z460 1538 aa9.56□□□□□ -0.88
RNU4ATAC-201ENST00000580972 PLB1Q6P1J6 1458 aa9.54□□□□□ -0.88
RNU4ATAC-201ENST00000580972 FYCO1Q9BQS8 1478 aa9.54□□□□□ -0.88
RNU4ATAC-201ENST00000580972 CARMIL2Q6F5E8 1435 aa9.54□□□□□ -0.88
RNU4ATAC-201ENST00000580972 CDK13Q14004 1512 aaKnown RBP9.52□□□□□ -0.88
RNU4ATAC-201ENST00000580972 PTPRGP23470 1445 aa9.52□□□□□ -0.89
RNU4ATAC-201ENST00000580972 OSCARQ8IYS5 282 aa9.52□□□□□ -0.89
RNU4ATAC-201ENST00000580972 TIAM1Q13009 1591 aa9.51□□□□□ -0.89
RNU4ATAC-201ENST00000580972 NUP153P49790 1475 aaKnown RBP9.51□□□□□ -0.89
RNU4ATAC-201ENST00000580972 LRRC9Q6ZRR7 1453 aa9.51□□□□□ -0.89
RNU4ATAC-201ENST00000580972 PHLDB1Q86UU1 1377 aa9.5□□□□□ -0.89
RNU4ATAC-201ENST00000580972 MAGI3Q5TCQ9 1506 aa9.49□□□□□ -0.89
RNU4ATAC-201ENST00000580972 SHROOM2Q13796 1616 aa9.49□□□□□ -0.89
RNU4ATAC-201ENST00000580972 EPRSP07814 1512 aaKnown RBP9.48□□□□□ -0.89
RNU4ATAC-201ENST00000580972 MAP3K1Q13233 1512 aa9.47□□□□□ -0.89
RNU4ATAC-201ENST00000580972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.47□□□□□ -0.89
RNU4ATAC-201ENST00000580972 HNRNPUL2Q1KMD3 747 aaKnown RBP9.47□□□□□ -0.89
RNU4ATAC-201ENST00000580972 MTUS2Q5JR59 1369 aa9.47□□□□□ -0.89
RNU4ATAC-201ENST00000580972 ABCA8O94911 1581 aa9.46□□□□□ -0.9
RNU4ATAC-201ENST00000580972 UACAQ9BZF9 1416 aa9.45□□□□□ -0.9
RNU4ATAC-201ENST00000580972 HECW1Q76N89 1606 aa9.45□□□□□ -0.9
RNU4ATAC-201ENST00000580972 ATP10BO94823 1461 aa9.44□□□□□ -0.9
RNU4ATAC-201ENST00000580972 RAPGEF6Q8TEU7 1601 aa9.44□□□□□ -0.9
RNU4ATAC-201ENST00000580972 CFAP43Q8NDM7 1665 aa9.43□□□□□ -0.9
RNU4ATAC-201ENST00000580972 CCDC18Q5T9S5 1454 aa9.43□□□□□ -0.9
RNU4ATAC-201ENST00000580972 NCOA2Q15596 1464 aa9.42□□□□□ -0.9
RNU4ATAC-201ENST00000580972 ITGAEP38570 1179 aa9.41□□□□□ -0.9
RNU4ATAC-201ENST00000580972 LRRIQ1Q96JM4 1722 aa9.41□□□□□ -0.9
RNU4ATAC-201ENST00000580972 RRBP1Q9P2E9 1410 aaKnown RBP9.4□□□□□ -0.9
RNU4ATAC-201ENST00000580972 CCNB3Q8WWL7 1395 aa9.4□□□□□ -0.9
RNU4ATAC-201ENST00000580972 FAM50AQ14320 339 aaKnown RBP9.4□□□□□ -0.9
RNU4ATAC-201ENST00000580972 EHBP1L1Q8N3D4 1523 aa9.4□□□□□ -0.91
RNU4ATAC-201ENST00000580972 ABCC2Q92887 1545 aa9.39□□□□□ -0.91
RNU4ATAC-201ENST00000580972 TROQ12816 1431 aaPredicted RBP9.39□□□□□ -0.91
RNU4ATAC-201ENST00000580972 ARHGEF11O15085 1522 aa9.37□□□□□ -0.91
RNU4ATAC-201ENST00000580972 FGD6Q6ZV73 1430 aa9.37□□□□□ -0.91
RNU4ATAC-201ENST00000580972 ZNF644Q9H582 1327 aaPredicted RBP9.36□□□□□ -0.91
RNU4ATAC-201ENST00000580972 UHRF1BP1LA0JNW5 1464 aa9.36□□□□□ -0.91
RNU4ATAC-201ENST00000580972 PLEKHD1A6NEE1 506 aa9.36□□□□□ -0.91
RNU4ATAC-201ENST00000580972 MYOM3Q5VTT5 1437 aa9.36□□□□□ -0.91
RNU4ATAC-201ENST00000580972 CDK11AQ9UQ88 783 aaPredicted RBP9.35□□□□□ -0.91
RNU4ATAC-201ENST00000580972 CYB5RLQ6IPT4 315 aa9.34□□□□□ -0.91
RNU4ATAC-201ENST00000580972 KCNH8Q96L42 1107 aa9.34□□□□□ -0.91
RNU4ATAC-201ENST00000580972 KIF14Q15058 1648 aa9.34□□□□□ -0.91
RNU4ATAC-201ENST00000580972 PTPRKQ15262 1439 aa9.33□□□□□ -0.92
RNU4ATAC-201ENST00000580972 KDM5BQ9UGL1 1544 aa9.33□□□□□ -0.92
RNU4ATAC-201ENST00000580972 ADCY10Q96PN6 1610 aa9.33□□□□□ -0.92
RNU4ATAC-201ENST00000580972 ABCC10Q5T3U5 1492 aa9.33□□□□□ -0.92
RNU4ATAC-201ENST00000580972 GPATCH8Q9UKJ3 1502 aaKnown RBP9.31□□□□□ -0.92
RNU4ATAC-201ENST00000580972 ZNF777Q9ULD5 760 aaPredicted RBP9.31□□□□□ -0.92
RNU4ATAC-201ENST00000580972 CFDP1Q9UEE9 299 aaPredicted RBP9.3□□□□□ -0.92
RNU4ATAC-201ENST00000580972 SUPT6HQ7KZ85 1726 aaKnown RBP9.29□□□□□ -0.92
RNU4ATAC-201ENST00000580972 CHIC2Q9UKJ5 165 aa9.29□□□□□ -0.92
RNU4ATAC-201ENST00000580972 ASXL2Q76L83 1435 aa9.29□□□□□ -0.92
RNU4ATAC-201ENST00000580972 TCOF1Q13428 1488 aaKnown RBP9.28□□□□□ -0.92
RNU4ATAC-201ENST00000580972 RIMBP3CA6NJZ7 1639 aa9.28□□□□□ -0.92
RNU4ATAC-201ENST00000580972 RIMBP3BA6NNM3 1639 aa9.28□□□□□ -0.92
RNU4ATAC-201ENST00000580972 ZCCHC11Q5TAX3 1644 aaKnown RBP9.28□□□□□ -0.92
RNU4ATAC-201ENST00000580972 RIMBP3Q9UFD9 1639 aa9.28□□□□□ -0.92
RNU4ATAC-201ENST00000580972 MIA2Q96PC5 1412 aa9.27□□□□□ -0.93
RNU4ATAC-201ENST00000580972 WDR7Q9Y4E6 1490 aa9.27□□□□□ -0.93
RNU4ATAC-201ENST00000580972 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.26□□□□□ -0.93
RNU4ATAC-201ENST00000580972 ABCC5O15440 1437 aa9.26□□□□□ -0.93
RNU4ATAC-201ENST00000580972 HRCP23327 699 aa9.26□□□□□ -0.93
RNU4ATAC-201ENST00000580972 PTPN23Q9H3S7 1636 aa9.26□□□□□ -0.93
RNU4ATAC-201ENST00000580972 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.26□□□□□ -0.931e-323■■■□□ 16.7
RNU4ATAC-201ENST00000580972 TTC37Q6PGP7 1564 aa9.25□□□□□ -0.93
RNU4ATAC-201ENST00000580972 NPM1P06748 294 aaKnown RBP eCLIP9.25□□□□□ -0.93
RNU4ATAC-201ENST00000580972 HNRNPMP52272 730 aaKnown RBP eCLIP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms