RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 NISCHQ9Y2I1 1504 aa14.13□□□□□ -0.15
RNU4ATAC-201ENST00000580972 CCDC180Q9P1Z9 1646 aa12.19□□□□□ -0.46
RNU4ATAC-201ENST00000580972 ZCCHC6Q5VYS8 1495 aaKnown RBP11.87□□□□□ -0.51
RNU4ATAC-201ENST00000580972 ABCC9O60706 1549 aa11.86□□□□□ -0.51
RNU4ATAC-201ENST00000580972 DCAF8L2P0C7V8 631 aa11.82□□□□□ -0.52
RNU4ATAC-201ENST00000580972 SHROOM4Q9ULL8 1493 aa11.65□□□□□ -0.54
RNU4ATAC-201ENST00000580972 DCAF1Q9Y4B6 1507 aa11.6□□□□□ -0.55
RNU4ATAC-201ENST00000580972 MYO15BQ96JP2 1530 aa11.46□□□□□ -0.57
RNU4ATAC-201ENST00000580972 NACADO15069 1562 aa11.45□□□□□ -0.58
RNU4ATAC-201ENST00000580972 SCRIBQ14160 1630 aa11.38□□□□□ -0.59
RNU4ATAC-201ENST00000580972 RB1CC1Q8TDY2 1594 aa11.37□□□□□ -0.59
RNU4ATAC-201ENST00000580972 PABPN1Q86U42 306 aaKnown RBP eCLIP11.24□□□□□ -0.61
RNU4ATAC-201ENST00000580972 SUPT5HO00267 1087 aaKnown RBP11.13□□□□□ -0.63
RNU4ATAC-201ENST00000580972 BICRAQ9NZM4 1560 aa11.11□□□□□ -0.63
RNU4ATAC-201ENST00000580972 CECR2Q9BXF3 1484 aa11.09□□□□□ -0.63
RNU4ATAC-201ENST00000580972 UNC13AQ9UPW8 1703 aa11.03□□□□□ -0.64
RNU4ATAC-201ENST00000580972 RSF1Q96T23 1441 aaPredicted RBP11□□□□□ -0.65
RNU4ATAC-201ENST00000580972 MROH2BQ7Z745 1585 aa10.97□□□□□ -0.65
RNU4ATAC-201ENST00000580972 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
RNU4ATAC-201ENST00000580972 SMARCA4P51532 1647 aa10.84□□□□□ -0.67
RNU4ATAC-201ENST00000580972 WIZO95785 1651 aa10.8□□□□□ -0.68
RNU4ATAC-201ENST00000580972 EIF4G1Q04637 1599 aaKnown RBP10.76□□□□□ -0.69
RNU4ATAC-201ENST00000580972 ATAD2BQ9ULI0 1458 aa10.75□□□□□ -0.69
RNU4ATAC-201ENST00000580972 TOP2AP11388 1531 aaKnown RBP10.69□□□□□ -0.7
RNU4ATAC-201ENST00000580972 PEG3Q9GZU2 1588 aa10.67□□□□□ -0.7
RNU4ATAC-201ENST00000580972 BAZ1BQ9UIG0 1483 aaKnown RBP10.66□□□□□ -0.7
RNU4ATAC-201ENST00000580972 SMARCA2P51531 1590 aa10.65□□□□□ -0.7
RNU4ATAC-201ENST00000580972 CCDC88BA6NC98 1476 aa10.64□□□□□ -0.71
RNU4ATAC-201ENST00000580972 NCAPD3P42695 1498 aa10.64□□□□□ -0.71
RNU4ATAC-201ENST00000580972 DNAJC5BQ9UF47 199 aa10.62□□□□□ -0.71
RNU4ATAC-201ENST00000580972 CC2D2AQ9P2K1 1620 aa10.62□□□□□ -0.71
RNU4ATAC-201ENST00000580972 CHIC1Q5VXU3 224 aa10.59□□□□□ -0.71
RNU4ATAC-201ENST00000580972 HMGXB3Q12766 1538 aa10.57□□□□□ -0.72
RNU4ATAC-201ENST00000580972 CADPSQ9ULU8 1353 aa10.39□□□□□ -0.75
RNU4ATAC-201ENST00000580972 ABCC8Q09428 1581 aa10.39□□□□□ -0.75
RNU4ATAC-201ENST00000580972 CFTRP13569 1480 aa10.39□□□□□ -0.75
RNU4ATAC-201ENST00000580972 TRIM41Q8WV44 630 aa10.39□□□□□ -0.75
RNU4ATAC-201ENST00000580972 NESP48681 1621 aa10.39□□□□□ -0.75
RNU4ATAC-201ENST00000580972 FAM9AQ8IZU1 332 aaPredicted RBP10.32□□□□□ -0.76
RNU4ATAC-201ENST00000580972 WRNQ14191 1432 aaPredicted RBP eCLIP10.32□□□□□ -0.76
RNU4ATAC-201ENST00000580972 FANCD2Q9BXW9 1451 aa10.28□□□□□ -0.76
RNU4ATAC-201ENST00000580972 SYNJ1O43426 1573 aa10.27□□□□□ -0.76
RNU4ATAC-201ENST00000580972 CUX1P39880 1505 aa10.26□□□□□ -0.77
RNU4ATAC-201ENST00000580972 EHMT2Q96KQ7 1210 aa10.24□□□□□ -0.77
RNU4ATAC-201ENST00000580972 SOGA1O94964 1423 aa10.24□□□□□ -0.77
RNU4ATAC-201ENST00000580972 LOC105371045A0A1W2PR82 267 aa10.23□□□□□ -0.77
RNU4ATAC-201ENST00000580972 RUSC2Q8N2Y8 1516 aa10.21□□□□□ -0.78
RNU4ATAC-201ENST00000580972 PDS5BQ9NTI5 1447 aa10.2□□□□□ -0.78
RNU4ATAC-201ENST00000580972 LAMC3Q9Y6N6 1575 aa10.2□□□□□ -0.78
RNU4ATAC-201ENST00000580972 CEP164Q9UPV0 1460 aa10.19□□□□□ -0.78
RNU4ATAC-201ENST00000580972 URB2Q14146 1524 aaKnown RBP10.18□□□□□ -0.78
RNU4ATAC-201ENST00000580972 TOP2BQ02880 1626 aa10.17□□□□□ -0.78
RNU4ATAC-201ENST00000580972 TOPBP1Q92547 1522 aa10.15□□□□□ -0.78
RNU4ATAC-201ENST00000580972 FGD5Q6ZNL6 1462 aa10.15□□□□□ -0.78
RNU4ATAC-201ENST00000580972 RAD54L2Q9Y4B4 1467 aa10.13□□□□□ -0.79
RNU4ATAC-201ENST00000580972 BIVM-ERCC5R4GMW8 1640 aa10.11□□□□□ -0.79
RNU4ATAC-201ENST00000580972 POLA1P09884 1462 aaPredicted RBP10.11□□□□□ -0.79
RNU4ATAC-201ENST00000580972 ERCC6Q03468 1493 aa10.11□□□□□ -0.79
RNU4ATAC-201ENST00000580972 DNMBPQ6XZF7 1577 aa10.11□□□□□ -0.79
RNU4ATAC-201ENST00000580972 MRC2Q9UBG0 1479 aa10.1□□□□□ -0.79
RNU4ATAC-201ENST00000580972 CSRNP3Q8WYN3 585 aa10.1□□□□□ -0.79
RNU4ATAC-201ENST00000580972 CUX2O14529 1486 aa10.09□□□□□ -0.79
RNU4ATAC-201ENST00000580972 KIF21AQ7Z4S6 1674 aa10.09□□□□□ -0.79
RNU4ATAC-201ENST00000580972 PRDM2Q13029 1718 aa10.07□□□□□ -0.8
RNU4ATAC-201ENST00000580972 TDRD9Q8NDG6 1382 aaKnown RBP10.05□□□□□ -0.8
RNU4ATAC-201ENST00000580972 EEA1Q15075 1411 aa10.05□□□□□ -0.8
RNU4ATAC-201ENST00000580972 KIF27Q86VH2 1401 aa10.04□□□□□ -0.8
RNU4ATAC-201ENST00000580972 IGF1RP08069 1367 aa10.02□□□□□ -0.8
RNU4ATAC-201ENST00000580972 WDR62O43379 1518 aa10.02□□□□□ -0.81
RNU4ATAC-201ENST00000580972 ABCA10Q8WWZ4 1543 aa10.02□□□□□ -0.81
RNU4ATAC-201ENST00000580972 THOC2Q8NI27 1593 aaKnown RBP10.01□□□□□ -0.81
RNU4ATAC-201ENST00000580972 RAPGEF2Q9Y4G8 1499 aa10□□□□□ -0.81
RNU4ATAC-201ENST00000580972 ZNF608Q9ULD9 1512 aaPredicted RBP9.99□□□□□ -0.81
RNU4ATAC-201ENST00000580972 AQRO60306 1485 aaKnown RBP eCLIP9.98□□□□□ -0.81
RNU4ATAC-201ENST00000580972 PRXQ9BXM0 1461 aa9.98□□□□□ -0.81
RNU4ATAC-201ENST00000580972 UBTFP17480 764 aaKnown RBP9.97□□□□□ -0.81
RNU4ATAC-201ENST00000580972 GOLGA3Q08378 1498 aa9.97□□□□□ -0.81
RNU4ATAC-201ENST00000580972 RANGAP1P46060 587 aaPredicted RBP9.95□□□□□ -0.82
RNU4ATAC-201ENST00000580972 CARMIL1Q5VZK9 1371 aa9.95□□□□□ -0.82
RNU4ATAC-201ENST00000580972 IFT140Q96RY7 1462 aa9.95□□□□□ -0.82
RNU4ATAC-201ENST00000580972 TARBP1Q13395 1621 aaKnown RBP9.95□□□□□ -0.82
RNU4ATAC-201ENST00000580972 GAPVD1Q14C86 1478 aa9.94□□□□□ -0.82
RNU4ATAC-201ENST00000580972 TNIKQ9UKE5 1360 aa9.93□□□□□ -0.82
RNU4ATAC-201ENST00000580972 KIF21BO75037 1637 aa9.91□□□□□ -0.82
RNU4ATAC-201ENST00000580972 CEP162Q5TB80 1403 aa9.9□□□□□ -0.82
RNU4ATAC-201ENST00000580972 WDR97A6NE52 1622 aa9.9□□□□□ -0.82
RNU4ATAC-201ENST00000580972 ABCA5Q8WWZ7 1642 aa9.9□□□□□ -0.82
RNU4ATAC-201ENST00000580972 GRIN2BQ13224 1484 aa9.87□□□□□ -0.83
RNU4ATAC-201ENST00000580972 ERICH3Q5RHP9 1530 aa9.87□□□□□ -0.83
RNU4ATAC-201ENST00000580972 SNAPC4Q5SXM2 1469 aa9.86□□□□□ -0.83
RNU4ATAC-201ENST00000580972 CLIP1P30622 1438 aa9.84□□□□□ -0.83
RNU4ATAC-201ENST00000580972 EIF4G3O43432 1585 aaKnown RBP9.84□□□□□ -0.83
RNU4ATAC-201ENST00000580972 FHAD1B1AJZ9 1412 aa9.83□□□□□ -0.84
RNU4ATAC-201ENST00000580972 ADAMTS12P58397 1594 aa9.81□□□□□ -0.84
RNU4ATAC-201ENST00000580972 FBLN2P98095 1184 aa9.81□□□□□ -0.84
RNU4ATAC-201ENST00000580972 PPARGC1BQ86YN6 1023 aaKnown RBP9.81□□□□□ -0.84
RNU4ATAC-201ENST00000580972 P3H3Q8IVL6 736 aa9.8□□□□□ -0.84
RNU4ATAC-201ENST00000580972 ARAP1Q96P48 1450 aa9.79□□□□□ -0.84
RNU4ATAC-201ENST00000580972 ARHGAP35Q9NRY4 1499 aa9.78□□□□□ -0.84
RNU4ATAC-201ENST00000580972 CUL7Q14999 1698 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms