RNA–Protein interactions for RNA: ENST00000575671.5

TRAP1-212, Transcript of TNF receptor associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAP1, Length 2,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-212ENST00000575671 CTTNBP2Q8WZ74 1663 aa19.56■□□□□ 0.72
TRAP1-212ENST00000575671 GRIN2BQ13224 1484 aa19.54■□□□□ 0.72
TRAP1-212ENST00000575671 P3H3Q8IVL6 736 aa19.53■□□□□ 0.72
TRAP1-212ENST00000575671 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
TRAP1-212ENST00000575671 ADAMTS12P58397 1594 aa19.5■□□□□ 0.71
TRAP1-212ENST00000575671 EIF4G3O43432 1585 aaKnown RBP19.48■□□□□ 0.71
TRAP1-212ENST00000575671 EFCAB5A4FU69 1503 aa19.46■□□□□ 0.71
TRAP1-212ENST00000575671 FHOD3Q2V2M9 1422 aa19.45■□□□□ 0.7
TRAP1-212ENST00000575671 SNAPC4Q5SXM2 1469 aa19.43■□□□□ 0.7
TRAP1-212ENST00000575671 KANK4Q5T7N3 995 aaPredicted RBP19.43■□□□□ 0.7
TRAP1-212ENST00000575671 ATP1B4Q9UN42 357 aaPredicted RBP19.38■□□□□ 0.69
TRAP1-212ENST00000575671 PCF11O94913 1555 aaKnown RBP19.37■□□□□ 0.69
TRAP1-212ENST00000575671 SAMD9Q5K651 1589 aa19.36■□□□□ 0.69
TRAP1-212ENST00000575671 IQGAP2Q13576 1575 aa19.35■□□□□ 0.69
TRAP1-212ENST00000575671 MAGI1Q96QZ7 1491 aaPredicted RBP19.34■□□□□ 0.69
TRAP1-212ENST00000575671 TIAM1Q13009 1591 aa19.33■□□□□ 0.68
TRAP1-212ENST00000575671 GRIN2AQ12879 1464 aa19.32■□□□□ 0.68
TRAP1-212ENST00000575671 FMN1Q68DA7 1419 aa19.32■□□□□ 0.68
TRAP1-212ENST00000575671 CHMP7Q8WUX9 453 aaPredicted RBP19.31■□□□□ 0.68
TRAP1-212ENST00000575671 FBLN2P98095 1184 aa19.3■□□□□ 0.68
TRAP1-212ENST00000575671 FYCO1Q9BQS8 1478 aa19.3■□□□□ 0.68
TRAP1-212ENST00000575671 MAP3K1Q13233 1512 aa19.3■□□□□ 0.68
TRAP1-212ENST00000575671 CASKIN1Q8WXD9 1431 aa19.3■□□□□ 0.68
TRAP1-212ENST00000575671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
TRAP1-212ENST00000575671 HNRNPUL2Q1KMD3 747 aaKnown RBP19.29■□□□□ 0.68
TRAP1-212ENST00000575671 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
TRAP1-212ENST00000575671 LRRC9Q6ZRR7 1453 aa19.26■□□□□ 0.67
TRAP1-212ENST00000575671 CFAP43Q8NDM7 1665 aa19.25■□□□□ 0.67
TRAP1-212ENST00000575671 KIAA0586Q9BVV6 1533 aa19.25■□□□□ 0.67
TRAP1-212ENST00000575671 ZEB1P37275 1124 aaPredicted RBP19.24■□□□□ 0.67
TRAP1-212ENST00000575671 CCER1Q8TC90 406 aaPredicted RBP19.23■□□□□ 0.67
TRAP1-212ENST00000575671 UGGT2Q9NYU1 1516 aa19.21■□□□□ 0.67
TRAP1-212ENST00000575671 CEP170Q5SW79 1584 aa19.2■□□□□ 0.66
TRAP1-212ENST00000575671 RRBP1Q9P2E9 1410 aaKnown RBP19.18■□□□□ 0.66
TRAP1-212ENST00000575671 CCNB3Q8WWL7 1395 aa19.15■□□□□ 0.66
TRAP1-212ENST00000575671 DISP1Q96F81 1524 aa19.14■□□□□ 0.65
TRAP1-212ENST00000575671 LRRIQ1Q96JM4 1722 aa19.14■□□□□ 0.65
TRAP1-212ENST00000575671 KIAA0556O60303 1618 aa19.14■□□□□ 0.65
TRAP1-212ENST00000575671 NUP160Q12769 1436 aa19.14■□□□□ 0.65
TRAP1-212ENST00000575671 PHLDB1Q86UU1 1377 aa19.12■□□□□ 0.65
TRAP1-212ENST00000575671 MTUS2Q5JR59 1369 aa19.11■□□□□ 0.65
TRAP1-212ENST00000575671 HECW1Q76N89 1606 aa19.09■□□□□ 0.65
TRAP1-212ENST00000575671 ITGAEP38570 1179 aa19.08■□□□□ 0.64
TRAP1-212ENST00000575671 JPH4Q96JJ6 628 aa19.07■□□□□ 0.64
TRAP1-212ENST00000575671 ARID3CA6NKF2 412 aa19.07■□□□□ 0.64
TRAP1-212ENST00000575671 CCDC18Q5T9S5 1454 aa19.06■□□□□ 0.64
TRAP1-212ENST00000575671 EPRSP07814 1512 aaKnown RBP19.04■□□□□ 0.64
TRAP1-212ENST00000575671 FAM50AQ14320 339 aaKnown RBP19.03■□□□□ 0.64
TRAP1-212ENST00000575671 CHD1O14646 1710 aa19.03■□□□□ 0.64
TRAP1-212ENST00000575671 CARMIL2Q6F5E8 1435 aa19.03■□□□□ 0.64
TRAP1-212ENST00000575671 CDK13Q14004 1512 aaKnown RBP19.02■□□□□ 0.64
TRAP1-212ENST00000575671 EHBP1L1Q8N3D4 1523 aa19.01■□□□□ 0.63
TRAP1-212ENST00000575671 MAGI3Q5TCQ9 1506 aa19■□□□□ 0.63
TRAP1-212ENST00000575671 NCOA2Q15596 1464 aa18.98■□□□□ 0.63
TRAP1-212ENST00000575671 RAPGEF6Q8TEU7 1601 aa18.98■□□□□ 0.63
TRAP1-212ENST00000575671 SUPT6HQ7KZ85 1726 aaKnown RBP18.98■□□□□ 0.63
TRAP1-212ENST00000575671 NUP153P49790 1475 aaKnown RBP18.96■□□□□ 0.63
TRAP1-212ENST00000575671 FGD6Q6ZV73 1430 aa18.95■□□□□ 0.62
TRAP1-212ENST00000575671 PLB1Q6P1J6 1458 aa18.95■□□□□ 0.62
TRAP1-212ENST00000575671 PRG4Q92954 1404 aaPredicted RBP18.92■□□□□ 0.62
TRAP1-212ENST00000575671 MYOM3Q5VTT5 1437 aa18.92■□□□□ 0.62
TRAP1-212ENST00000575671 ARHGEF11O15085 1522 aa18.89■□□□□ 0.61
TRAP1-212ENST00000575671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.88■□□□□ 0.61
TRAP1-212ENST00000575671 CDK11AQ9UQ88 783 aaPredicted RBP18.86■□□□□ 0.61
TRAP1-212ENST00000575671 RAB3GAP2Q9H2M9 1393 aa18.84■□□□□ 0.61
TRAP1-212ENST00000575671 DHX57Q6P158 1386 aaKnown RBP18.84■□□□□ 0.61
TRAP1-212ENST00000575671 PTPRGP23470 1445 aa18.83■□□□□ 0.61
TRAP1-212ENST00000575671 PTPN23Q9H3S7 1636 aa18.82■□□□□ 0.6
TRAP1-212ENST00000575671 ABCA8O94911 1581 aa18.82■□□□□ 0.6
TRAP1-212ENST00000575671 SETD5Q9C0A6 1442 aa18.82■□□□□ 0.6
TRAP1-212ENST00000575671 SHROOM2Q13796 1616 aa18.82■□□□□ 0.6
TRAP1-212ENST00000575671 CLASP1Q7Z460 1538 aa18.78■□□□□ 0.6
TRAP1-212ENST00000575671 TROQ12816 1431 aaPredicted RBP18.78■□□□□ 0.6
TRAP1-212ENST00000575671 ERCC6L2Q5T890 1561 aa18.77■□□□□ 0.6
TRAP1-212ENST00000575671 PTPRKQ15262 1439 aa18.76■□□□□ 0.59
TRAP1-212ENST00000575671 MIA2Q96PC5 1412 aa18.75■□□□□ 0.59
TRAP1-212ENST00000575671 ATP10BO94823 1461 aa18.75■□□□□ 0.59
TRAP1-212ENST00000575671 TCOF1Q13428 1488 aaKnown RBP18.75■□□□□ 0.59
TRAP1-212ENST00000575671 CLSPNQ9HAW4 1339 aa18.74■□□□□ 0.59
TRAP1-212ENST00000575671 PLEKHD1A6NEE1 506 aa18.72■□□□□ 0.59
TRAP1-212ENST00000575671 KIF14Q15058 1648 aa18.72■□□□□ 0.59
TRAP1-212ENST00000575671 UACAQ9BZF9 1416 aa18.7■□□□□ 0.58
TRAP1-212ENST00000575671 CHIC2Q9UKJ5 165 aa18.69■□□□□ 0.58
TRAP1-212ENST00000575671 ADCY10Q96PN6 1610 aa18.69■□□□□ 0.58
TRAP1-212ENST00000575671 HFM1A2PYH4 1435 aa18.68■□□□□ 0.58
TRAP1-212ENST00000575671 ZNF644Q9H582 1327 aaPredicted RBP18.67■□□□□ 0.58
TRAP1-212ENST00000575671 CFDP1Q9UEE9 299 aaPredicted RBP18.66■□□□□ 0.58
TRAP1-212ENST00000575671 ITSN2Q9NZM3 1697 aa18.64■□□□□ 0.57
TRAP1-212ENST00000575671 GPATCH8Q9UKJ3 1502 aaKnown RBP18.64■□□□□ 0.57
TRAP1-212ENST00000575671 NAIPQ13075 1403 aa18.64■□□□□ 0.57
TRAP1-212ENST00000575671 RRP7BPQ9NSQ0 103 aa18.64■□□□□ 0.57
TRAP1-212ENST00000575671 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
TRAP1-212ENST00000575671 ABCC2Q92887 1545 aa18.63■□□□□ 0.57
TRAP1-212ENST00000575671 ZNF777Q9ULD5 760 aaPredicted RBP18.62■□□□□ 0.57
TRAP1-212ENST00000575671 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
TRAP1-212ENST00000575671 DAPK1P53355 1430 aa18.61■□□□□ 0.57
TRAP1-212ENST00000575671 CAMSAP2Q08AD1 1489 aa18.6■□□□□ 0.57
TRAP1-212ENST00000575671 ABCC10Q5T3U5 1492 aa18.59■□□□□ 0.57
TRAP1-212ENST00000575671 DNMT1P26358 1616 aaKnown RBP18.58■□□□□ 0.57
TRAP1-212ENST00000575671 ABCC5O15440 1437 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms