RNA–Protein interactions for RNA: ENST00000575671.5

TRAP1-212, Transcript of TNF receptor associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAP1, Length 2,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-212ENST00000575671 NISCHQ9Y2I1 1504 aa28.2■■■□□ 2.1
TRAP1-212ENST00000575671 CCDC180Q9P1Z9 1646 aa24.42■■□□□ 1.5
TRAP1-212ENST00000575671 ZCCHC6Q5VYS8 1495 aaKnown RBP23.72■■□□□ 1.39
TRAP1-212ENST00000575671 DCAF8L2P0C7V8 631 aa23.45■■□□□ 1.35
TRAP1-212ENST00000575671 SHROOM4Q9ULL8 1493 aa23.35■■□□□ 1.33
TRAP1-212ENST00000575671 DCAF1Q9Y4B6 1507 aa23.22■■□□□ 1.31
TRAP1-212ENST00000575671 ABCC9O60706 1549 aa23.1■■□□□ 1.29
TRAP1-212ENST00000575671 MYO15BQ96JP2 1530 aa22.85■■□□□ 1.25
TRAP1-212ENST00000575671 NACADO15069 1562 aa22.72■■□□□ 1.23
TRAP1-212ENST00000575671 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
TRAP1-212ENST00000575671 SUPT5HO00267 1087 aaKnown RBP22.56■■□□□ 1.2
TRAP1-212ENST00000575671 RB1CC1Q8TDY2 1594 aa22.52■■□□□ 1.2
TRAP1-212ENST00000575671 UNC13AQ9UPW8 1703 aa22.09■■□□□ 1.13
TRAP1-212ENST00000575671 RSF1Q96T23 1441 aaPredicted RBP21.99■■□□□ 1.11
TRAP1-212ENST00000575671 CECR2Q9BXF3 1484 aa21.97■■□□□ 1.11
TRAP1-212ENST00000575671 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.095e-7■□□□□ 9.8
TRAP1-212ENST00000575671 BICRAQ9NZM4 1560 aa21.85■■□□□ 1.09
TRAP1-212ENST00000575671 MROH2BQ7Z745 1585 aa21.84■■□□□ 1.09
TRAP1-212ENST00000575671 BAZ1AQ9NRL2 1556 aaPredicted RBP21.75■■□□□ 1.07
TRAP1-212ENST00000575671 WIZO95785 1651 aa21.69■■□□□ 1.06
TRAP1-212ENST00000575671 SMARCA4P51532 1647 aa21.64■■□□□ 1.06
TRAP1-212ENST00000575671 CHIC1Q5VXU3 224 aa21.6■■□□□ 1.05
TRAP1-212ENST00000575671 TOP2AP11388 1531 aaKnown RBP21.4■■□□□ 1.02
TRAP1-212ENST00000575671 PEG3Q9GZU2 1588 aa21.3■■□□□ 1
TRAP1-212ENST00000575671 ATAD2BQ9ULI0 1458 aa21.25■□□□□ 0.99
TRAP1-212ENST00000575671 CCDC88BA6NC98 1476 aa21.24■□□□□ 0.99
TRAP1-212ENST00000575671 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
TRAP1-212ENST00000575671 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
TRAP1-212ENST00000575671 BAZ1BQ9UIG0 1483 aaKnown RBP21.17■□□□□ 0.98
TRAP1-212ENST00000575671 TRIM41Q8WV44 630 aa21.13■□□□□ 0.97
TRAP1-212ENST00000575671 NCAPD3P42695 1498 aa20.99■□□□□ 0.95
TRAP1-212ENST00000575671 HMGXB3Q12766 1538 aa20.97■□□□□ 0.95
TRAP1-212ENST00000575671 ABCC8Q09428 1581 aa20.91■□□□□ 0.94
TRAP1-212ENST00000575671 CC2D2AQ9P2K1 1620 aa20.9■□□□□ 0.94
TRAP1-212ENST00000575671 LOC105371045A0A1W2PR82 267 aa20.87■□□□□ 0.93
TRAP1-212ENST00000575671 FAM9AQ8IZU1 332 aaPredicted RBP20.84■□□□□ 0.93
TRAP1-212ENST00000575671 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.92e-6■■□□□ 11.9
TRAP1-212ENST00000575671 EHMT2Q96KQ7 1210 aa20.64■□□□□ 0.89
TRAP1-212ENST00000575671 SYNJ1O43426 1573 aa20.61■□□□□ 0.89
TRAP1-212ENST00000575671 CFTRP13569 1480 aa20.6■□□□□ 0.89
TRAP1-212ENST00000575671 SOGA1O94964 1423 aa20.55■□□□□ 0.88
TRAP1-212ENST00000575671 CADPSQ9ULU8 1353 aa20.51■□□□□ 0.87
TRAP1-212ENST00000575671 RUSC2Q8N2Y8 1516 aa20.47■□□□□ 0.87
TRAP1-212ENST00000575671 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
TRAP1-212ENST00000575671 TOP2BQ02880 1626 aa20.46■□□□□ 0.87
TRAP1-212ENST00000575671 PRDM2Q13029 1718 aa20.46■□□□□ 0.87
TRAP1-212ENST00000575671 EEA1Q15075 1411 aa20.44■□□□□ 0.86
TRAP1-212ENST00000575671 BIVM-ERCC5R4GMW8 1640 aa20.42■□□□□ 0.86
TRAP1-212ENST00000575671 CUX1P39880 1505 aa20.4■□□□□ 0.86
TRAP1-212ENST00000575671 CSRNP3Q8WYN3 585 aa20.39■□□□□ 0.85
TRAP1-212ENST00000575671 NESP48681 1621 aa20.34■□□□□ 0.85
TRAP1-212ENST00000575671 FANCD2Q9BXW9 1451 aa20.31■□□□□ 0.84
TRAP1-212ENST00000575671 LAMC3Q9Y6N6 1575 aa20.25■□□□□ 0.83
TRAP1-212ENST00000575671 UBTFP17480 764 aaKnown RBP20.23■□□□□ 0.83
TRAP1-212ENST00000575671 GOLGA3Q08378 1498 aa20.22■□□□□ 0.83
TRAP1-212ENST00000575671 CEP164Q9UPV0 1460 aa20.2■□□□□ 0.82
TRAP1-212ENST00000575671 TNIKQ9UKE5 1360 aa20.18■□□□□ 0.82
TRAP1-212ENST00000575671 KIF21BO75037 1637 aa20.18■□□□□ 0.82
TRAP1-212ENST00000575671 FGD5Q6ZNL6 1462 aa20.16■□□□□ 0.82
TRAP1-212ENST00000575671 KIF27Q86VH2 1401 aa20.15■□□□□ 0.82
TRAP1-212ENST00000575671 CEP162Q5TB80 1403 aa20.14■□□□□ 0.81
TRAP1-212ENST00000575671 PCGF6Q9BYE7 350 aa20.13■□□□□ 0.81
TRAP1-212ENST00000575671 PDS5BQ9NTI5 1447 aa20.12■□□□□ 0.81
TRAP1-212ENST00000575671 DNMBPQ6XZF7 1577 aa20.12■□□□□ 0.81
TRAP1-212ENST00000575671 RAPGEF2Q9Y4G8 1499 aa20.11■□□□□ 0.81
TRAP1-212ENST00000575671 TOPBP1Q92547 1522 aa20.1■□□□□ 0.81
TRAP1-212ENST00000575671 CUX2O14529 1486 aa20.08■□□□□ 0.81
TRAP1-212ENST00000575671 KIF21AQ7Z4S6 1674 aa20.05■□□□□ 0.8
TRAP1-212ENST00000575671 URB2Q14146 1524 aaKnown RBP20.04■□□□□ 0.8
TRAP1-212ENST00000575671 PRXQ9BXM0 1461 aa20.03■□□□□ 0.8
TRAP1-212ENST00000575671 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
TRAP1-212ENST00000575671 RAD54L2Q9Y4B4 1467 aa20.01■□□□□ 0.79
TRAP1-212ENST00000575671 ERICH3Q5RHP9 1530 aa19.99■□□□□ 0.79
TRAP1-212ENST00000575671 TRIM26Q12899 539 aaPredicted RBP19.99■□□□□ 0.79
TRAP1-212ENST00000575671 RANGAP1P46060 587 aaPredicted RBP19.96■□□□□ 0.79
TRAP1-212ENST00000575671 IGF1RP08069 1367 aa19.95■□□□□ 0.78
TRAP1-212ENST00000575671 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
TRAP1-212ENST00000575671 CLIP1P30622 1438 aa19.94■□□□□ 0.78
TRAP1-212ENST00000575671 ABCA10Q8WWZ4 1543 aa19.94■□□□□ 0.78
TRAP1-212ENST00000575671 HRCP23327 699 aa19.9■□□□□ 0.78
TRAP1-212ENST00000575671 CARMIL1Q5VZK9 1371 aa19.87■□□□□ 0.77
TRAP1-212ENST00000575671 MRC2Q9UBG0 1479 aa19.85■□□□□ 0.77
TRAP1-212ENST00000575671 WDR97A6NE52 1622 aa19.83■□□□□ 0.77
TRAP1-212ENST00000575671 TDRD9Q8NDG6 1382 aaKnown RBP19.81■□□□□ 0.76
TRAP1-212ENST00000575671 TTBK1Q5TCY1 1321 aaPredicted RBP19.79■□□□□ 0.76
TRAP1-212ENST00000575671 ERCC6Q03468 1493 aa19.78■□□□□ 0.76
TRAP1-212ENST00000575671 VPS8Q8N3P4 1428 aa19.76■□□□□ 0.75
TRAP1-212ENST00000575671 TARBP1Q13395 1621 aaKnown RBP19.75■□□□□ 0.75
TRAP1-212ENST00000575671 ABCA5Q8WWZ7 1642 aa19.75■□□□□ 0.75
TRAP1-212ENST00000575671 GAPVD1Q14C86 1478 aa19.75■□□□□ 0.75
TRAP1-212ENST00000575671 CUL7Q14999 1698 aa19.73■□□□□ 0.75
TRAP1-212ENST00000575671 WDR62O43379 1518 aa19.73■□□□□ 0.75
TRAP1-212ENST00000575671 THOC2Q8NI27 1593 aaKnown RBP19.72■□□□□ 0.75
TRAP1-212ENST00000575671 ARAP1Q96P48 1450 aa19.7■□□□□ 0.74
TRAP1-212ENST00000575671 ARHGAP35Q9NRY4 1499 aa19.66■□□□□ 0.74
TRAP1-212ENST00000575671 APLP2Q06481 763 aa19.65■□□□□ 0.74
TRAP1-212ENST00000575671 AQRO60306 1485 aaKnown RBP eCLIP19.64■□□□□ 0.741e-7■■■■□ 20.1
TRAP1-212ENST00000575671 IFT140Q96RY7 1462 aa19.62■□□□□ 0.73
TRAP1-212ENST00000575671 PBRM1Q86U86 1689 aa19.6■□□□□ 0.73
TRAP1-212ENST00000575671 ZNF608Q9ULD9 1512 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms