RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 P3H3Q8IVL6 736 aa17.69■□□□□ 0.42
LINC00562-201ENST00000566385 CTTNBP2Q8WZ74 1663 aa17.69■□□□□ 0.42
LINC00562-201ENST00000566385 ADAMTS12P58397 1594 aa17.68■□□□□ 0.42
LINC00562-201ENST00000566385 FHAD1B1AJZ9 1412 aa17.68■□□□□ 0.42
LINC00562-201ENST00000566385 SNAPC4Q5SXM2 1469 aa17.65■□□□□ 0.42
LINC00562-201ENST00000566385 FHOD3Q2V2M9 1422 aa17.59■□□□□ 0.41
LINC00562-201ENST00000566385 APLP2Q06481 763 aa17.59■□□□□ 0.41
LINC00562-201ENST00000566385 KANK4Q5T7N3 995 aaPredicted RBP17.56■□□□□ 0.4
LINC00562-201ENST00000566385 FBLN2P98095 1184 aa17.55■□□□□ 0.4
LINC00562-201ENST00000566385 GRIN2AQ12879 1464 aa17.54■□□□□ 0.4
LINC00562-201ENST00000566385 MAGI1Q96QZ7 1491 aaPredicted RBP17.54■□□□□ 0.4
LINC00562-201ENST00000566385 EFCAB5A4FU69 1503 aa17.53■□□□□ 0.4
LINC00562-201ENST00000566385 CHMP7Q8WUX9 453 aaPredicted RBP17.52■□□□□ 0.4
LINC00562-201ENST00000566385 IQGAP2Q13576 1575 aa17.51■□□□□ 0.39
LINC00562-201ENST00000566385 SAMD9Q5K651 1589 aa17.51■□□□□ 0.39
LINC00562-201ENST00000566385 SYNJ2O15056 1496 aa17.5■□□□□ 0.39
LINC00562-201ENST00000566385 PCF11O94913 1555 aaKnown RBP17.49■□□□□ 0.39
LINC00562-201ENST00000566385 ATP1B4Q9UN42 357 aaPredicted RBP17.48■□□□□ 0.39
LINC00562-201ENST00000566385 CEP170Q5SW79 1584 aa17.46■□□□□ 0.39
LINC00562-201ENST00000566385 KIAA0586Q9BVV6 1533 aa17.45■□□□□ 0.38
LINC00562-201ENST00000566385 HRCP23327 699 aa17.43■□□□□ 0.38
LINC00562-201ENST00000566385 TIAM1Q13009 1591 aa17.42■□□□□ 0.38
LINC00562-201ENST00000566385 FMN1Q68DA7 1419 aa17.41■□□□□ 0.38
LINC00562-201ENST00000566385 CASKIN1Q8WXD9 1431 aa17.4■□□□□ 0.38
LINC00562-201ENST00000566385 UGGT2Q9NYU1 1516 aa17.4■□□□□ 0.38
LINC00562-201ENST00000566385 FYCO1Q9BQS8 1478 aa17.39■□□□□ 0.37
LINC00562-201ENST00000566385 NUP160Q12769 1436 aa17.38■□□□□ 0.37
LINC00562-201ENST00000566385 DISP1Q96F81 1524 aa17.38■□□□□ 0.37
LINC00562-201ENST00000566385 LRRIQ1Q96JM4 1722 aa17.37■□□□□ 0.37
LINC00562-201ENST00000566385 MAP3K1Q13233 1512 aa17.37■□□□□ 0.37
LINC00562-201ENST00000566385 LRRC9Q6ZRR7 1453 aa17.35■□□□□ 0.37
LINC00562-201ENST00000566385 CFAP43Q8NDM7 1665 aa17.35■□□□□ 0.37
LINC00562-201ENST00000566385 CHD1O14646 1710 aa17.34■□□□□ 0.37
LINC00562-201ENST00000566385 KIAA0556O60303 1618 aa17.34■□□□□ 0.37
LINC00562-201ENST00000566385 JPH4Q96JJ6 628 aa17.33■□□□□ 0.36
LINC00562-201ENST00000566385 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
LINC00562-201ENST00000566385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
LINC00562-201ENST00000566385 ARID3CA6NKF2 412 aa17.29■□□□□ 0.36
LINC00562-201ENST00000566385 PHLDB1Q86UU1 1377 aa17.26■□□□□ 0.35
LINC00562-201ENST00000566385 RRBP1Q9P2E9 1410 aaKnown RBP17.25■□□□□ 0.35
LINC00562-201ENST00000566385 CDK13Q14004 1512 aaKnown RBP17.22■□□□□ 0.35
LINC00562-201ENST00000566385 MAGI3Q5TCQ9 1506 aa17.22■□□□□ 0.35
LINC00562-201ENST00000566385 MTUS2Q5JR59 1369 aa17.22■□□□□ 0.35
LINC00562-201ENST00000566385 EPRSP07814 1512 aaKnown RBP17.22■□□□□ 0.35
LINC00562-201ENST00000566385 HECW1Q76N89 1606 aa17.21■□□□□ 0.35
LINC00562-201ENST00000566385 CCNB3Q8WWL7 1395 aa17.21■□□□□ 0.35
LINC00562-201ENST00000566385 CARMIL2Q6F5E8 1435 aa17.2■□□□□ 0.34
LINC00562-201ENST00000566385 PLB1Q6P1J6 1458 aa17.2■□□□□ 0.34
LINC00562-201ENST00000566385 PRG4Q92954 1404 aaPredicted RBP17.19■□□□□ 0.34
LINC00562-201ENST00000566385 NUP153P49790 1475 aaKnown RBP17.18■□□□□ 0.34
LINC00562-201ENST00000566385 ITGAEP38570 1179 aa17.18■□□□□ 0.34
LINC00562-201ENST00000566385 RAPGEF6Q8TEU7 1601 aa17.17■□□□□ 0.34
LINC00562-201ENST00000566385 CCDC18Q5T9S5 1454 aa17.17■□□□□ 0.34
LINC00562-201ENST00000566385 CCER1Q8TC90 406 aaPredicted RBP17.16■□□□□ 0.34
LINC00562-201ENST00000566385 ERCC6L2Q5T890 1561 aa17.13■□□□□ 0.33
LINC00562-201ENST00000566385 NCOA2Q15596 1464 aa17.13■□□□□ 0.33
LINC00562-201ENST00000566385 FAM50AQ14320 339 aaKnown RBP17.12■□□□□ 0.33
LINC00562-201ENST00000566385 EHBP1L1Q8N3D4 1523 aa17.12■□□□□ 0.33
LINC00562-201ENST00000566385 SHROOM2Q13796 1616 aa17.12■□□□□ 0.33
LINC00562-201ENST00000566385 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
LINC00562-201ENST00000566385 CLASP1Q7Z460 1538 aa17.09■□□□□ 0.33
LINC00562-201ENST00000566385 PTPRGP23470 1445 aa17.07■□□□□ 0.32
LINC00562-201ENST00000566385 FGD6Q6ZV73 1430 aa17.07■□□□□ 0.32
LINC00562-201ENST00000566385 ABCA8O94911 1581 aa17.07■□□□□ 0.32
LINC00562-201ENST00000566385 ARHGEF11O15085 1522 aa17.07■□□□□ 0.32
LINC00562-201ENST00000566385 MYOM3Q5VTT5 1437 aa17.05■□□□□ 0.32
LINC00562-201ENST00000566385 ZEB1P37275 1124 aaPredicted RBP17.04■□□□□ 0.32
LINC00562-201ENST00000566385 ATP10BO94823 1461 aa17.01■□□□□ 0.31
LINC00562-201ENST00000566385 CDK11AQ9UQ88 783 aaPredicted RBP16.99■□□□□ 0.31
LINC00562-201ENST00000566385 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.98■□□□□ 0.31
LINC00562-201ENST00000566385 PTPN23Q9H3S7 1636 aa16.97■□□□□ 0.31
LINC00562-201ENST00000566385 TROQ12816 1431 aaPredicted RBP16.97■□□□□ 0.31
LINC00562-201ENST00000566385 PTPRKQ15262 1439 aa16.97■□□□□ 0.31
LINC00562-201ENST00000566385 KIF14Q15058 1648 aa16.96■□□□□ 0.31
LINC00562-201ENST00000566385 UACAQ9BZF9 1416 aa16.96■□□□□ 0.31
LINC00562-201ENST00000566385 RAB3GAP2Q9H2M9 1393 aa16.94■□□□□ 0.3
LINC00562-201ENST00000566385 PLEKHD1A6NEE1 506 aa16.93■□□□□ 0.3
LINC00562-201ENST00000566385 ZNF644Q9H582 1327 aaPredicted RBP16.92■□□□□ 0.3
LINC00562-201ENST00000566385 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
LINC00562-201ENST00000566385 DHX57Q6P158 1386 aaKnown RBP16.91■□□□□ 0.3
LINC00562-201ENST00000566385 SETD5Q9C0A6 1442 aa16.9■□□□□ 0.3
LINC00562-201ENST00000566385 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
LINC00562-201ENST00000566385 MIA2Q96PC5 1412 aa16.9■□□□□ 0.3
LINC00562-201ENST00000566385 ABCC2Q92887 1545 aa16.89■□□□□ 0.29
LINC00562-201ENST00000566385 ADCY10Q96PN6 1610 aa16.89■□□□□ 0.29
LINC00562-201ENST00000566385 CHIC2Q9UKJ5 165 aa16.88■□□□□ 0.29
LINC00562-201ENST00000566385 GPATCH8Q9UKJ3 1502 aaKnown RBP16.87■□□□□ 0.29
LINC00562-201ENST00000566385 CFDP1Q9UEE9 299 aaPredicted RBP16.85■□□□□ 0.29
LINC00562-201ENST00000566385 ABCC10Q5T3U5 1492 aa16.84■□□□□ 0.29
LINC00562-201ENST00000566385 ZNF777Q9ULD5 760 aaPredicted RBP16.84■□□□□ 0.29
LINC00562-201ENST00000566385 CDC42BPAQ5VT25 1732 aa16.83■□□□□ 0.28
LINC00562-201ENST00000566385 RRP7BPQ9NSQ0 103 aa16.82■□□□□ 0.28
LINC00562-201ENST00000566385 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
LINC00562-201ENST00000566385 NAIPQ13075 1403 aa16.81■□□□□ 0.28
LINC00562-201ENST00000566385 ITSN2Q9NZM3 1697 aa16.81■□□□□ 0.28
LINC00562-201ENST00000566385 HFM1A2PYH4 1435 aa16.81■□□□□ 0.28
LINC00562-201ENST00000566385 UHRF1BP1LA0JNW5 1464 aa16.8■□□□□ 0.28
LINC00562-201ENST00000566385 KCNH8Q96L42 1107 aa16.79■□□□□ 0.28
LINC00562-201ENST00000566385 CAMSAP2Q08AD1 1489 aa16.79■□□□□ 0.28
LINC00562-201ENST00000566385 KDM5BQ9UGL1 1544 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms