RNA–Protein interactions for RNA: ENST00000563972.1

SPIRE2-205, Transcript of spire type actin nucleation factor 2, humanhuman

TSL 1 (best) BASIC

Gene SPIRE2, Length 1,823 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-205ENST00000563972 FHAD1B1AJZ9 1412 aa36.89■■■■□ 3.5
SPIRE2-205ENST00000563972 ADAMTS12P58397 1594 aa36.88■■■■□ 3.49
SPIRE2-205ENST00000563972 GRIN2AQ12879 1464 aa36.8■■■■□ 3.48
SPIRE2-205ENST00000563972 RAPGEF2Q9Y4G8 1499 aa36.78■■■■□ 3.48
SPIRE2-205ENST00000563972 CLIP1P30622 1438 aa36.74■■■■□ 3.47
SPIRE2-205ENST00000563972 CARMIL1Q5VZK9 1371 aa36.71■■■■□ 3.47
SPIRE2-205ENST00000563972 PRXQ9BXM0 1461 aa36.68■■■■□ 3.46
SPIRE2-205ENST00000563972 CUL7Q14999 1698 aa36.64■■■■□ 3.46
SPIRE2-205ENST00000563972 CLASP1Q7Z460 1538 aa36.62■■■■□ 3.45
SPIRE2-205ENST00000563972 CEP170Q5SW79 1584 aa36.61■■■■□ 3.45
SPIRE2-205ENST00000563972 NUP160Q12769 1436 aa36.61■■■■□ 3.45
SPIRE2-205ENST00000563972 VPS8Q8N3P4 1428 aa36.59■■■■□ 3.45
SPIRE2-205ENST00000563972 ARHGEF11O15085 1522 aa36.5■■■■□ 3.43
SPIRE2-205ENST00000563972 RIMBP3CA6NJZ7 1639 aa36.46■■■■□ 3.43
SPIRE2-205ENST00000563972 RIMBP3BA6NNM3 1639 aa36.46■■■■□ 3.43
SPIRE2-205ENST00000563972 RIMBP3Q9UFD9 1639 aa36.46■■■■□ 3.43
SPIRE2-205ENST00000563972 JPH4Q96JJ6 628 aa36.37■■■■□ 3.41
SPIRE2-205ENST00000563972 TTBK1Q5TCY1 1321 aaPredicted RBP36.36■■■■□ 3.41
SPIRE2-205ENST00000563972 KIAA0586Q9BVV6 1533 aa36.33■■■■□ 3.41
SPIRE2-205ENST00000563972 CYB5RLQ6IPT4 315 aa36.32■■■■□ 3.41
SPIRE2-205ENST00000563972 CCER1Q8TC90 406 aaPredicted RBP36.3■■■■□ 3.4
SPIRE2-205ENST00000563972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.29■■■■□ 3.4
SPIRE2-205ENST00000563972 APLP2Q06481 763 aa36.27■■■■□ 3.4
SPIRE2-205ENST00000563972 ERCC6L2Q5T890 1561 aa36.26■■■■□ 3.39
SPIRE2-205ENST00000563972 ARAP1Q96P48 1450 aa36.24■■■■□ 3.39
SPIRE2-205ENST00000563972 SHROOM2Q13796 1616 aa36.24■■■■□ 3.39
SPIRE2-205ENST00000563972 PRG4Q92954 1404 aaPredicted RBP36.24■■■■□ 3.39
SPIRE2-205ENST00000563972 RANGAP1P46060 587 aaPredicted RBP36.12■■■■□ 3.37
SPIRE2-205ENST00000563972 IQGAP2Q13576 1575 aa36.12■■■■□ 3.37
SPIRE2-205ENST00000563972 ARHGAP35Q9NRY4 1499 aa36.01■■■■□ 3.36
SPIRE2-205ENST00000563972 CTTNBP2Q8WZ74 1663 aa35.99■■■■□ 3.35
SPIRE2-205ENST00000563972 CARMIL2Q6F5E8 1435 aa35.94■■■■□ 3.34
SPIRE2-205ENST00000563972 UGGT2Q9NYU1 1516 aa35.92■■■■□ 3.34
SPIRE2-205ENST00000563972 DISP1Q96F81 1524 aa35.9■■■■□ 3.34
SPIRE2-205ENST00000563972 PTPRGP23470 1445 aa35.83■■■■□ 3.33
SPIRE2-205ENST00000563972 HNRNPUL2Q1KMD3 747 aaKnown RBP35.8■■■■□ 3.32
SPIRE2-205ENST00000563972 P3H3Q8IVL6 736 aa35.8■■■■□ 3.32
SPIRE2-205ENST00000563972 KIAA0556O60303 1618 aa35.77■■■■□ 3.32
SPIRE2-205ENST00000563972 MAP3K1Q13233 1512 aa35.76■■■■□ 3.31
SPIRE2-205ENST00000563972 KANK4Q5T7N3 995 aaPredicted RBP35.74■■■■□ 3.31
SPIRE2-205ENST00000563972 RRBP1Q9P2E9 1410 aaKnown RBP35.7■■■■□ 3.31
SPIRE2-205ENST00000563972 EFCAB5A4FU69 1503 aa35.66■■■■□ 3.3
SPIRE2-205ENST00000563972 TIAM1Q13009 1591 aa35.6■■■■□ 3.29
SPIRE2-205ENST00000563972 ADCY10Q96PN6 1610 aa35.59■■■■□ 3.29
SPIRE2-205ENST00000563972 SAMD9Q5K651 1589 aa35.57■■■■□ 3.29
SPIRE2-205ENST00000563972 UACAQ9BZF9 1416 aa35.56■■■■□ 3.28
SPIRE2-205ENST00000563972 NPM1P06748 294 aaKnown RBP eCLIP35.56■■■■□ 3.28
SPIRE2-205ENST00000563972 TRHP20396 242 aaPredicted RBP35.52■■■■□ 3.28
SPIRE2-205ENST00000563972 FHOD3Q2V2M9 1422 aa35.52■■■■□ 3.28
SPIRE2-205ENST00000563972 PLB1Q6P1J6 1458 aa35.51■■■■□ 3.28
SPIRE2-205ENST00000563972 CCNB3Q8WWL7 1395 aa35.49■■■■□ 3.27
SPIRE2-205ENST00000563972 CLSPNQ9HAW4 1339 aa35.46■■■■□ 3.27
SPIRE2-205ENST00000563972 UHRF1BP1LA0JNW5 1464 aa35.44■■■■□ 3.26
SPIRE2-205ENST00000563972 CFAP43Q8NDM7 1665 aa35.44■■■■□ 3.26
SPIRE2-205ENST00000563972 ABCC2Q92887 1545 aa35.44■■■■□ 3.26
SPIRE2-205ENST00000563972 LRRC9Q6ZRR7 1453 aa35.44■■■■□ 3.26
SPIRE2-205ENST00000563972 PCF11O94913 1555 aaKnown RBP35.41■■■■□ 3.26
SPIRE2-205ENST00000563972 FYCO1Q9BQS8 1478 aa35.38■■■■□ 3.25
SPIRE2-205ENST00000563972 ABCA8O94911 1581 aa35.38■■■■□ 3.25
SPIRE2-205ENST00000563972 ARID3CA6NKF2 412 aa35.37■■■■□ 3.25
SPIRE2-205ENST00000563972 CASKIN1Q8WXD9 1431 aa35.34■■■■□ 3.25
SPIRE2-205ENST00000563972 ZNF316A6NFI3 1004 aaPredicted RBP35.32■■■■□ 3.24
SPIRE2-205ENST00000563972 DHX57Q6P158 1386 aaKnown RBP35.31■■■■□ 3.24
SPIRE2-205ENST00000563972 DIEXFQ68CQ4 756 aaKnown RBP35.31■■■■□ 3.24
SPIRE2-205ENST00000563972 KDM5BQ9UGL1 1544 aa35.3■■■■□ 3.24
SPIRE2-205ENST00000563972 FMN1Q68DA7 1419 aa35.3■■■■□ 3.24
SPIRE2-205ENST00000563972 MAPKBP1O60336 1514 aa35.26■■■■□ 3.24
SPIRE2-205ENST00000563972 RAPGEF6Q8TEU7 1601 aa35.22■■■■□ 3.23
SPIRE2-205ENST00000563972 ASXL2Q76L83 1435 aa35.22■■■■□ 3.23
SPIRE2-205ENST00000563972 ZCCHC11Q5TAX3 1644 aaKnown RBP35.22■■■■□ 3.23
SPIRE2-205ENST00000563972 FAM69CQ0P6D2 419 aa35.2■■■■□ 3.23
SPIRE2-205ENST00000563972 ATP1B4Q9UN42 357 aaPredicted RBP35.2■■■■□ 3.23
SPIRE2-205ENST00000563972 PHLDB1Q86UU1 1377 aa35.18■■■■□ 3.22
SPIRE2-205ENST00000563972 ATP10BO94823 1461 aa35.17■■■■□ 3.22
SPIRE2-205ENST00000563972 NUP153P49790 1475 aaKnown RBP35.15■■■■□ 3.22
SPIRE2-205ENST00000563972 ABCC10Q5T3U5 1492 aa35.14■■■■□ 3.22
SPIRE2-205ENST00000563972 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.08■■■■□ 3.212e-9■□□□□ 10
SPIRE2-205ENST00000563972 KCNH8Q96L42 1107 aa35.07■■■■□ 3.2
SPIRE2-205ENST00000563972 DIP2BQ9P265 1576 aa35.05■■■■□ 3.2
SPIRE2-205ENST00000563972 KIF13AQ9H1H9 1805 aa35.05■■■■□ 3.2
SPIRE2-205ENST00000563972 WDR7Q9Y4E6 1490 aa35.03■■■■□ 3.2
SPIRE2-205ENST00000563972 SETD5Q9C0A6 1442 aa34.99■■■■□ 3.19
SPIRE2-205ENST00000563972 RAB3GAP2Q9H2M9 1393 aa34.99■■■■□ 3.19
SPIRE2-205ENST00000563972 EPRSP07814 1512 aaKnown RBP34.99■■■■□ 3.19
SPIRE2-205ENST00000563972 ITGAEP38570 1179 aa34.99■■■■□ 3.19
SPIRE2-205ENST00000563972 LRRIQ1Q96JM4 1722 aa34.97■■■■□ 3.19
SPIRE2-205ENST00000563972 CDK13Q14004 1512 aaKnown RBP34.96■■■■□ 3.19
SPIRE2-205ENST00000563972 HECW1Q76N89 1606 aa34.96■■■■□ 3.19
SPIRE2-205ENST00000563972 PLEKHD1A6NEE1 506 aa34.93■■■■□ 3.18
SPIRE2-205ENST00000563972 FAM50AQ14320 339 aaKnown RBP34.9■■■■□ 3.18
SPIRE2-205ENST00000563972 CCDC18Q5T9S5 1454 aa34.89■■■■□ 3.18
SPIRE2-205ENST00000563972 MTUS2Q5JR59 1369 aa34.89■■■■□ 3.18
SPIRE2-205ENST00000563972 GLI2P10070 1586 aa34.87■■■■□ 3.17
SPIRE2-205ENST00000563972 FGD6Q6ZV73 1430 aa34.86■■■■□ 3.17
SPIRE2-205ENST00000563972 EHBP1L1Q8N3D4 1523 aa34.84■■■■□ 3.17
SPIRE2-205ENST00000563972 TSPOAP1O95153 1857 aa34.82■■■■□ 3.17
SPIRE2-205ENST00000563972 CDK11AQ9UQ88 783 aaPredicted RBP34.78■■■■□ 3.16
SPIRE2-205ENST00000563972 SUPT6HQ7KZ85 1726 aaKnown RBP34.77■■■■□ 3.16
SPIRE2-205ENST00000563972 NCOA2Q15596 1464 aa34.75■■■■□ 3.15
SPIRE2-205ENST00000563972 CD109Q6YHK3 1445 aa34.74■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms