RNA–Protein interactions for RNA: ENST00000552197.5

SLC38A1-210, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC38A1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-210ENST00000552197 P3H3Q8IVL6 736 aa17.31■□□□□ 0.36
SLC38A1-210ENST00000552197 ARAP1Q96P48 1450 aa17.3■□□□□ 0.36
SLC38A1-210ENST00000552197 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
SLC38A1-210ENST00000552197 CHMP7Q8WUX9 453 aaPredicted RBP17.3■□□□□ 0.36
SLC38A1-210ENST00000552197 MAGI1Q96QZ7 1491 aaPredicted RBP17.29■□□□□ 0.36
SLC38A1-210ENST00000552197 TTBK1Q5TCY1 1321 aaPredicted RBP17.28■□□□□ 0.36
SLC38A1-210ENST00000552197 PCGF6Q9BYE7 350 aa17.28■□□□□ 0.36
SLC38A1-210ENST00000552197 GRIN2AQ12879 1464 aa17.25■□□□□ 0.35
SLC38A1-210ENST00000552197 SYNJ2O15056 1496 aa17.24■□□□□ 0.35
SLC38A1-210ENST00000552197 APLP2Q06481 763 aa17.21■□□□□ 0.35
SLC38A1-210ENST00000552197 TRIM26Q12899 539 aaPredicted RBP17.21■□□□□ 0.35
SLC38A1-210ENST00000552197 FHOD3Q2V2M9 1422 aa17.2■□□□□ 0.34
SLC38A1-210ENST00000552197 IQGAP2Q13576 1575 aa17.19■□□□□ 0.34
SLC38A1-210ENST00000552197 EFCAB5A4FU69 1503 aa17.18■□□□□ 0.34
SLC38A1-210ENST00000552197 CEP170Q5SW79 1584 aa17.16■□□□□ 0.34
SLC38A1-210ENST00000552197 KIAA0586Q9BVV6 1533 aa17.15■□□□□ 0.34
SLC38A1-210ENST00000552197 ATP1B4Q9UN42 357 aaPredicted RBP17.14■□□□□ 0.33
SLC38A1-210ENST00000552197 SAMD9Q5K651 1589 aa17.13■□□□□ 0.33
SLC38A1-210ENST00000552197 CHD1O14646 1710 aa17.11■□□□□ 0.33
SLC38A1-210ENST00000552197 NUP160Q12769 1436 aa17.1■□□□□ 0.33
SLC38A1-210ENST00000552197 UGGT2Q9NYU1 1516 aa17.07■□□□□ 0.32
SLC38A1-210ENST00000552197 PCF11O94913 1555 aaKnown RBP17.06■□□□□ 0.32
SLC38A1-210ENST00000552197 KANK4Q5T7N3 995 aaPredicted RBP17.06■□□□□ 0.32
SLC38A1-210ENST00000552197 FMN1Q68DA7 1419 aa17.06■□□□□ 0.32
SLC38A1-210ENST00000552197 JPH4Q96JJ6 628 aa17.05■□□□□ 0.32
SLC38A1-210ENST00000552197 DISP1Q96F81 1524 aa17.03■□□□□ 0.32
SLC38A1-210ENST00000552197 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
SLC38A1-210ENST00000552197 KIAA0556O60303 1618 aa17.01■□□□□ 0.31
SLC38A1-210ENST00000552197 FYCO1Q9BQS8 1478 aa17■□□□□ 0.31
SLC38A1-210ENST00000552197 TIAM1Q13009 1591 aa16.98■□□□□ 0.31
SLC38A1-210ENST00000552197 CARMIL2Q6F5E8 1435 aa16.95■□□□□ 0.3
SLC38A1-210ENST00000552197 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
SLC38A1-210ENST00000552197 MAP3K1Q13233 1512 aa16.93■□□□□ 0.3
SLC38A1-210ENST00000552197 PRG4Q92954 1404 aaPredicted RBP16.93■□□□□ 0.3
SLC38A1-210ENST00000552197 LRRIQ1Q96JM4 1722 aa16.93■□□□□ 0.3
SLC38A1-210ENST00000552197 CFAP43Q8NDM7 1665 aa16.92■□□□□ 0.3
SLC38A1-210ENST00000552197 LRRC9Q6ZRR7 1453 aa16.91■□□□□ 0.3
SLC38A1-210ENST00000552197 HECW1Q76N89 1606 aa16.88■□□□□ 0.29
SLC38A1-210ENST00000552197 PLB1Q6P1J6 1458 aa16.85■□□□□ 0.29
SLC38A1-210ENST00000552197 SHROOM2Q13796 1616 aa16.85■□□□□ 0.29
SLC38A1-210ENST00000552197 CLASP1Q7Z460 1538 aa16.85■□□□□ 0.29
SLC38A1-210ENST00000552197 MTUS2Q5JR59 1369 aa16.85■□□□□ 0.29
SLC38A1-210ENST00000552197 RAPGEF6Q8TEU7 1601 aa16.85■□□□□ 0.29
SLC38A1-210ENST00000552197 EPRSP07814 1512 aaKnown RBP16.84■□□□□ 0.29
SLC38A1-210ENST00000552197 CDK13Q14004 1512 aaKnown RBP16.84■□□□□ 0.29
SLC38A1-210ENST00000552197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.84■□□□□ 0.29
SLC38A1-210ENST00000552197 HNRNPUL2Q1KMD3 747 aaKnown RBP16.84■□□□□ 0.29
SLC38A1-210ENST00000552197 ERCC6L2Q5T890 1561 aa16.83■□□□□ 0.28
SLC38A1-210ENST00000552197 CCDC18Q5T9S5 1454 aa16.83■□□□□ 0.28
SLC38A1-210ENST00000552197 PTPRGP23470 1445 aa16.82■□□□□ 0.28
SLC38A1-210ENST00000552197 NUP153P49790 1475 aaKnown RBP16.82■□□□□ 0.28
SLC38A1-210ENST00000552197 OSCARQ8IYS5 282 aa16.8■□□□□ 0.28
SLC38A1-210ENST00000552197 PHLDB1Q86UU1 1377 aa16.79■□□□□ 0.28
SLC38A1-210ENST00000552197 MAGI3Q5TCQ9 1506 aa16.78■□□□□ 0.28
SLC38A1-210ENST00000552197 ABCA8O94911 1581 aa16.75■□□□□ 0.27
SLC38A1-210ENST00000552197 RRBP1Q9P2E9 1410 aaKnown RBP16.75■□□□□ 0.27
SLC38A1-210ENST00000552197 EHBP1L1Q8N3D4 1523 aa16.75■□□□□ 0.27
SLC38A1-210ENST00000552197 CCNB3Q8WWL7 1395 aa16.74■□□□□ 0.27
SLC38A1-210ENST00000552197 ITGAEP38570 1179 aa16.73■□□□□ 0.27
SLC38A1-210ENST00000552197 NCOA2Q15596 1464 aa16.73■□□□□ 0.27
SLC38A1-210ENST00000552197 SUPT6HQ7KZ85 1726 aaKnown RBP16.73■□□□□ 0.27
SLC38A1-210ENST00000552197 CDK11AQ9UQ88 783 aaPredicted RBP16.72■□□□□ 0.27
SLC38A1-210ENST00000552197 FAM50AQ14320 339 aaKnown RBP16.71■□□□□ 0.27
SLC38A1-210ENST00000552197 UACAQ9BZF9 1416 aa16.7■□□□□ 0.26
SLC38A1-210ENST00000552197 ATP10BO94823 1461 aa16.68■□□□□ 0.26
SLC38A1-210ENST00000552197 PLEKHD1A6NEE1 506 aa16.65■□□□□ 0.26
SLC38A1-210ENST00000552197 HRCP23327 699 aa16.65■□□□□ 0.26
SLC38A1-210ENST00000552197 FGD6Q6ZV73 1430 aa16.64■□□□□ 0.26
SLC38A1-210ENST00000552197 MYOM3Q5VTT5 1437 aa16.64■□□□□ 0.25
SLC38A1-210ENST00000552197 TROQ12816 1431 aaPredicted RBP16.64■□□□□ 0.25
SLC38A1-210ENST00000552197 ARHGEF11O15085 1522 aa16.63■□□□□ 0.25
SLC38A1-210ENST00000552197 ABCC2Q92887 1545 aa16.62■□□□□ 0.25
SLC38A1-210ENST00000552197 KIF14Q15058 1648 aa16.59■□□□□ 0.25
SLC38A1-210ENST00000552197 CCER1Q8TC90 406 aaPredicted RBP16.59■□□□□ 0.25
SLC38A1-210ENST00000552197 PTPN23Q9H3S7 1636 aa16.56■□□□□ 0.24
SLC38A1-210ENST00000552197 UHRF1BP1LA0JNW5 1464 aa16.55■□□□□ 0.24
SLC38A1-210ENST00000552197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.54■□□□□ 0.24
SLC38A1-210ENST00000552197 ADCY10Q96PN6 1610 aa16.54■□□□□ 0.24
SLC38A1-210ENST00000552197 ZCCHC11Q5TAX3 1644 aaKnown RBP16.53■□□□□ 0.24
SLC38A1-210ENST00000552197 KCNH8Q96L42 1107 aa16.53■□□□□ 0.24
SLC38A1-210ENST00000552197 MIA2Q96PC5 1412 aa16.52■□□□□ 0.24
SLC38A1-210ENST00000552197 ZNF644Q9H582 1327 aaPredicted RBP16.51■□□□□ 0.23
SLC38A1-210ENST00000552197 KDM5BQ9UGL1 1544 aa16.51■□□□□ 0.23
SLC38A1-210ENST00000552197 CFDP1Q9UEE9 299 aaPredicted RBP16.51■□□□□ 0.23
SLC38A1-210ENST00000552197 ZNF777Q9ULD5 760 aaPredicted RBP16.51■□□□□ 0.23
SLC38A1-210ENST00000552197 GPATCH8Q9UKJ3 1502 aaKnown RBP16.51■□□□□ 0.23
SLC38A1-210ENST00000552197 TCOF1Q13428 1488 aaKnown RBP16.49■□□□□ 0.23
SLC38A1-210ENST00000552197 PTPRKQ15262 1439 aa16.49■□□□□ 0.23
SLC38A1-210ENST00000552197 ABCC10Q5T3U5 1492 aa16.48■□□□□ 0.23
SLC38A1-210ENST00000552197 ITSN2Q9NZM3 1697 aa16.48■□□□□ 0.23
SLC38A1-210ENST00000552197 CHIC2Q9UKJ5 165 aa16.47■□□□□ 0.23
SLC38A1-210ENST00000552197 CDC42BPAQ5VT25 1732 aa16.47■□□□□ 0.23
SLC38A1-210ENST00000552197 RAB3GAP2Q9H2M9 1393 aa16.44■□□□□ 0.22
SLC38A1-210ENST00000552197 NPM1P06748 294 aaKnown RBP eCLIP16.44■□□□□ 0.22
SLC38A1-210ENST00000552197 ZEB1P37275 1124 aaPredicted RBP16.44■□□□□ 0.22
SLC38A1-210ENST00000552197 CYB5RLQ6IPT4 315 aa16.44■□□□□ 0.22
SLC38A1-210ENST00000552197 SETD5Q9C0A6 1442 aa16.44■□□□□ 0.22
SLC38A1-210ENST00000552197 CAMSAP2Q08AD1 1489 aa16.43■□□□□ 0.22
SLC38A1-210ENST00000552197 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.42■□□□□ 0.22
SLC38A1-210ENST00000552197 TTC37Q6PGP7 1564 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms