RNA–Protein interactions for RNA: ENST00000552197.5

SLC38A1-210, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC38A1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-210ENST00000552197 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
SLC38A1-210ENST00000552197 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
SLC38A1-210ENST00000552197 ZCCHC6Q5VYS8 1495 aaKnown RBP21■□□□□ 0.95
SLC38A1-210ENST00000552197 DCAF8L2P0C7V8 631 aa20.92■□□□□ 0.94
SLC38A1-210ENST00000552197 ABCC9O60706 1549 aa20.83■□□□□ 0.92
SLC38A1-210ENST00000552197 DCAF1Q9Y4B6 1507 aa20.62■□□□□ 0.89
SLC38A1-210ENST00000552197 SHROOM4Q9ULL8 1493 aa20.57■□□□□ 0.88
SLC38A1-210ENST00000552197 MYO15BQ96JP2 1530 aa20.37■□□□□ 0.85
SLC38A1-210ENST00000552197 NACADO15069 1562 aa20.34■□□□□ 0.85
SLC38A1-210ENST00000552197 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
SLC38A1-210ENST00000552197 SCRIBQ14160 1630 aa20.17■□□□□ 0.82
SLC38A1-210ENST00000552197 UNC13AQ9UPW8 1703 aa19.84■□□□□ 0.77
SLC38A1-210ENST00000552197 SUPT5HO00267 1087 aaKnown RBP19.77■□□□□ 0.75
SLC38A1-210ENST00000552197 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
SLC38A1-210ENST00000552197 BICRAQ9NZM4 1560 aa19.61■□□□□ 0.73
SLC38A1-210ENST00000552197 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
SLC38A1-210ENST00000552197 RSF1Q96T23 1441 aaPredicted RBP19.44■□□□□ 0.7
SLC38A1-210ENST00000552197 MROH2BQ7Z745 1585 aa19.39■□□□□ 0.69
SLC38A1-210ENST00000552197 BAZ1AQ9NRL2 1556 aaPredicted RBP19.33■□□□□ 0.68
SLC38A1-210ENST00000552197 SMARCA4P51532 1647 aa19.27■□□□□ 0.67
SLC38A1-210ENST00000552197 WIZO95785 1651 aa19.24■□□□□ 0.67
SLC38A1-210ENST00000552197 EIF4G1Q04637 1599 aaKnown RBP19.04■□□□□ 0.64
SLC38A1-210ENST00000552197 ATAD2BQ9ULI0 1458 aa18.97■□□□□ 0.63
SLC38A1-210ENST00000552197 TOP2AP11388 1531 aaKnown RBP18.97■□□□□ 0.63
SLC38A1-210ENST00000552197 PEG3Q9GZU2 1588 aa18.97■□□□□ 0.63
SLC38A1-210ENST00000552197 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
SLC38A1-210ENST00000552197 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
SLC38A1-210ENST00000552197 CCDC88BA6NC98 1476 aa18.83■□□□□ 0.6
SLC38A1-210ENST00000552197 CHIC1Q5VXU3 224 aa18.81■□□□□ 0.6
SLC38A1-210ENST00000552197 CC2D2AQ9P2K1 1620 aa18.8■□□□□ 0.6
SLC38A1-210ENST00000552197 NCAPD3P42695 1498 aa18.79■□□□□ 0.6
SLC38A1-210ENST00000552197 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
SLC38A1-210ENST00000552197 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
SLC38A1-210ENST00000552197 ABCC8Q09428 1581 aa18.46■□□□□ 0.55
SLC38A1-210ENST00000552197 DNAJC5BQ9UF47 199 aa18.45■□□□□ 0.54
SLC38A1-210ENST00000552197 CFTRP13569 1480 aa18.37■□□□□ 0.53
SLC38A1-210ENST00000552197 CADPSQ9ULU8 1353 aa18.34■□□□□ 0.53
SLC38A1-210ENST00000552197 WRNQ14191 1432 aaPredicted RBP eCLIP18.3■□□□□ 0.52
SLC38A1-210ENST00000552197 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
SLC38A1-210ENST00000552197 NESP48681 1621 aa18.26■□□□□ 0.51
SLC38A1-210ENST00000552197 PRDM2Q13029 1718 aa18.25■□□□□ 0.51
SLC38A1-210ENST00000552197 SYNJ1O43426 1573 aa18.23■□□□□ 0.51
SLC38A1-210ENST00000552197 LOC105371045A0A1W2PR82 267 aa18.17■□□□□ 0.5
SLC38A1-210ENST00000552197 LAMC3Q9Y6N6 1575 aa18.16■□□□□ 0.5
SLC38A1-210ENST00000552197 FANCD2Q9BXW9 1451 aa18.15■□□□□ 0.5
SLC38A1-210ENST00000552197 TOP2BQ02880 1626 aa18.12■□□□□ 0.49
SLC38A1-210ENST00000552197 CUX1P39880 1505 aa18.12■□□□□ 0.49
SLC38A1-210ENST00000552197 EHMT2Q96KQ7 1210 aa18.1■□□□□ 0.49
SLC38A1-210ENST00000552197 SOGA1O94964 1423 aa18.1■□□□□ 0.49
SLC38A1-210ENST00000552197 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
SLC38A1-210ENST00000552197 PDS5BQ9NTI5 1447 aa18.05■□□□□ 0.48
SLC38A1-210ENST00000552197 RUSC2Q8N2Y8 1516 aa18.05■□□□□ 0.48
SLC38A1-210ENST00000552197 CEP164Q9UPV0 1460 aa18.04■□□□□ 0.48
SLC38A1-210ENST00000552197 KIF21AQ7Z4S6 1674 aa18.01■□□□□ 0.47
SLC38A1-210ENST00000552197 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
SLC38A1-210ENST00000552197 DNMBPQ6XZF7 1577 aa17.94■□□□□ 0.46
SLC38A1-210ENST00000552197 EEA1Q15075 1411 aa17.94■□□□□ 0.46
SLC38A1-210ENST00000552197 FGD5Q6ZNL6 1462 aa17.94■□□□□ 0.46
SLC38A1-210ENST00000552197 TOPBP1Q92547 1522 aa17.94■□□□□ 0.46
SLC38A1-210ENST00000552197 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
SLC38A1-210ENST00000552197 POLA1P09884 1462 aaPredicted RBP17.86■□□□□ 0.45
SLC38A1-210ENST00000552197 ERCC6Q03468 1493 aa17.85■□□□□ 0.45
SLC38A1-210ENST00000552197 RAD54L2Q9Y4B4 1467 aa17.84■□□□□ 0.45
SLC38A1-210ENST00000552197 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
SLC38A1-210ENST00000552197 CUX2O14529 1486 aa17.83■□□□□ 0.44
SLC38A1-210ENST00000552197 MRC2Q9UBG0 1479 aa17.81■□□□□ 0.44
SLC38A1-210ENST00000552197 UBTFP17480 764 aaKnown RBP17.78■□□□□ 0.44
SLC38A1-210ENST00000552197 GOLGA3Q08378 1498 aa17.75■□□□□ 0.43
SLC38A1-210ENST00000552197 ABCA10Q8WWZ4 1543 aa17.73■□□□□ 0.43
SLC38A1-210ENST00000552197 KIF21BO75037 1637 aa17.73■□□□□ 0.43
SLC38A1-210ENST00000552197 RAPGEF2Q9Y4G8 1499 aa17.72■□□□□ 0.43
SLC38A1-210ENST00000552197 WDR62O43379 1518 aa17.7■□□□□ 0.42
SLC38A1-210ENST00000552197 IGF1RP08069 1367 aa17.7■□□□□ 0.42
SLC38A1-210ENST00000552197 TDRD9Q8NDG6 1382 aaKnown RBP17.7■□□□□ 0.42
SLC38A1-210ENST00000552197 THOC2Q8NI27 1593 aaKnown RBP17.67■□□□□ 0.42
SLC38A1-210ENST00000552197 PRXQ9BXM0 1461 aa17.67■□□□□ 0.42
SLC38A1-210ENST00000552197 TNIKQ9UKE5 1360 aa17.67■□□□□ 0.42
SLC38A1-210ENST00000552197 WDR97A6NE52 1622 aa17.67■□□□□ 0.42
SLC38A1-210ENST00000552197 TARBP1Q13395 1621 aaKnown RBP17.66■□□□□ 0.42
SLC38A1-210ENST00000552197 CARMIL1Q5VZK9 1371 aa17.62■□□□□ 0.41
SLC38A1-210ENST00000552197 ERICH3Q5RHP9 1530 aa17.61■□□□□ 0.41
SLC38A1-210ENST00000552197 RANGAP1P46060 587 aaPredicted RBP17.61■□□□□ 0.41
SLC38A1-210ENST00000552197 CEP162Q5TB80 1403 aa17.61■□□□□ 0.41
SLC38A1-210ENST00000552197 GAPVD1Q14C86 1478 aa17.6■□□□□ 0.41
SLC38A1-210ENST00000552197 ABCA5Q8WWZ7 1642 aa17.6■□□□□ 0.41
SLC38A1-210ENST00000552197 AQRO60306 1485 aaKnown RBP eCLIP17.58■□□□□ 0.414e-7■■■■□ 24.2
SLC38A1-210ENST00000552197 IFT140Q96RY7 1462 aa17.58■□□□□ 0.41
SLC38A1-210ENST00000552197 ZNF608Q9ULD9 1512 aaPredicted RBP17.56■□□□□ 0.4
SLC38A1-210ENST00000552197 CUL7Q14999 1698 aa17.51■□□□□ 0.39
SLC38A1-210ENST00000552197 PBRM1Q86U86 1689 aa17.5■□□□□ 0.39
SLC38A1-210ENST00000552197 CLIP1P30622 1438 aa17.49■□□□□ 0.39
SLC38A1-210ENST00000552197 GRIN2BQ13224 1484 aa17.45■□□□□ 0.38
SLC38A1-210ENST00000552197 EIF4G3O43432 1585 aaKnown RBP17.45■□□□□ 0.38
SLC38A1-210ENST00000552197 PPARGC1BQ86YN6 1023 aaKnown RBP17.39■□□□□ 0.38
SLC38A1-210ENST00000552197 FHAD1B1AJZ9 1412 aa17.39■□□□□ 0.37
SLC38A1-210ENST00000552197 SNAPC4Q5SXM2 1469 aa17.38■□□□□ 0.37
SLC38A1-210ENST00000552197 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
SLC38A1-210ENST00000552197 CTTNBP2Q8WZ74 1663 aa17.34■□□□□ 0.37
SLC38A1-210ENST00000552197 FBLN2P98095 1184 aa17.33■□□□□ 0.36
SLC38A1-210ENST00000552197 ARHGAP35Q9NRY4 1499 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms