RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CTTNBP2Q8WZ74 1663 aa30.64■■■□□ 2.5
SSH1-209ENST00000551165 ADAMTS12P58397 1594 aa30.63■■■□□ 2.49
SSH1-209ENST00000551165 FHAD1B1AJZ9 1412 aa30.63■■■□□ 2.49
SSH1-209ENST00000551165 P3H3Q8IVL6 736 aa30.61■■■□□ 2.49
SSH1-209ENST00000551165 SNAPC4Q5SXM2 1469 aa30.56■■■□□ 2.48
SSH1-209ENST00000551165 APLP2Q06481 763 aa30.51■■■□□ 2.48
SSH1-209ENST00000551165 FHOD3Q2V2M9 1422 aa30.48■■■□□ 2.47
SSH1-209ENST00000551165 EFCAB5A4FU69 1503 aa30.42■■■□□ 2.46
SSH1-209ENST00000551165 KANK4Q5T7N3 995 aaPredicted RBP30.41■■■□□ 2.46
SSH1-209ENST00000551165 MAGI1Q96QZ7 1491 aaPredicted RBP30.38■■■□□ 2.45
SSH1-209ENST00000551165 GRIN2AQ12879 1464 aa30.36■■■□□ 2.45
SSH1-209ENST00000551165 SAMD9Q5K651 1589 aa30.35■■■□□ 2.45
SSH1-209ENST00000551165 FBLN2P98095 1184 aa30.33■■■□□ 2.45
SSH1-209ENST00000551165 IQGAP2Q13576 1575 aa30.33■■■□□ 2.45
SSH1-209ENST00000551165 CHMP7Q8WUX9 453 aaPredicted RBP30.32■■■□□ 2.44
SSH1-209ENST00000551165 HRCP23327 699 aa30.31■■■□□ 2.44
SSH1-209ENST00000551165 PCF11O94913 1555 aaKnown RBP30.31■■■□□ 2.44
SSH1-209ENST00000551165 SYNJ2O15056 1496 aa30.31■■■□□ 2.44
SSH1-209ENST00000551165 ATP1B4Q9UN42 357 aaPredicted RBP30.26■■■□□ 2.43
SSH1-209ENST00000551165 KIAA0586Q9BVV6 1533 aa30.22■■■□□ 2.43
SSH1-209ENST00000551165 CEP170Q5SW79 1584 aa30.22■■■□□ 2.43
SSH1-209ENST00000551165 TIAM1Q13009 1591 aa30.21■■■□□ 2.43
SSH1-209ENST00000551165 FMN1Q68DA7 1419 aa30.19■■■□□ 2.42
SSH1-209ENST00000551165 CASKIN1Q8WXD9 1431 aa30.19■■■□□ 2.42
SSH1-209ENST00000551165 FYCO1Q9BQS8 1478 aa30.16■■■□□ 2.42
SSH1-209ENST00000551165 UGGT2Q9NYU1 1516 aa30.16■■■□□ 2.42
SSH1-209ENST00000551165 MAP3K1Q13233 1512 aa30.14■■■□□ 2.42
SSH1-209ENST00000551165 NUP160Q12769 1436 aa30.11■■■□□ 2.41
SSH1-209ENST00000551165 DISP1Q96F81 1524 aa30.09■■■□□ 2.41
SSH1-209ENST00000551165 LRRC9Q6ZRR7 1453 aa30.09■■■□□ 2.41
SSH1-209ENST00000551165 CFAP43Q8NDM7 1665 aa30.09■■■□□ 2.41
SSH1-209ENST00000551165 LRRIQ1Q96JM4 1722 aa30.05■■■□□ 2.4
SSH1-209ENST00000551165 KIAA0556O60303 1618 aa30.03■■■□□ 2.4
SSH1-209ENST00000551165 HNRNPUL2Q1KMD3 747 aaKnown RBP30.03■■■□□ 2.4
SSH1-209ENST00000551165 CHD1O14646 1710 aa29.99■■■□□ 2.39
SSH1-209ENST00000551165 JPH4Q96JJ6 628 aa29.98■■■□□ 2.39
SSH1-209ENST00000551165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.97■■■□□ 2.39
SSH1-209ENST00000551165 RRBP1Q9P2E9 1410 aaKnown RBP29.92■■■□□ 2.38
SSH1-209ENST00000551165 PHLDB1Q86UU1 1377 aa29.92■■■□□ 2.38
SSH1-209ENST00000551165 ARID3CA6NKF2 412 aa29.9■■■□□ 2.38
SSH1-209ENST00000551165 CCNB3Q8WWL7 1395 aa29.85■■■□□ 2.37
SSH1-209ENST00000551165 HECW1Q76N89 1606 aa29.85■■■□□ 2.37
SSH1-209ENST00000551165 MTUS2Q5JR59 1369 aa29.83■■■□□ 2.37
SSH1-209ENST00000551165 CDK13Q14004 1512 aaKnown RBP29.83■■■□□ 2.37
SSH1-209ENST00000551165 EPRSP07814 1512 aaKnown RBP29.82■■■□□ 2.36
SSH1-209ENST00000551165 MAGI3Q5TCQ9 1506 aa29.82■■■□□ 2.36
SSH1-209ENST00000551165 CARMIL2Q6F5E8 1435 aa29.8■■■□□ 2.36
SSH1-209ENST00000551165 CCDC18Q5T9S5 1454 aa29.78■■■□□ 2.36
SSH1-209ENST00000551165 CCER1Q8TC90 406 aaPredicted RBP29.78■■■□□ 2.36
SSH1-209ENST00000551165 PLB1Q6P1J6 1458 aa29.76■■■□□ 2.35
SSH1-209ENST00000551165 NUP153P49790 1475 aaKnown RBP29.75■■■□□ 2.35
SSH1-209ENST00000551165 RAPGEF6Q8TEU7 1601 aa29.75■■■□□ 2.35
SSH1-209ENST00000551165 PRG4Q92954 1404 aaPredicted RBP29.75■■■□□ 2.35
SSH1-209ENST00000551165 ITGAEP38570 1179 aa29.74■■■□□ 2.35
SSH1-209ENST00000551165 EHBP1L1Q8N3D4 1523 aa29.69■■■□□ 2.34
SSH1-209ENST00000551165 NCOA2Q15596 1464 aa29.69■■■□□ 2.34
SSH1-209ENST00000551165 FAM50AQ14320 339 aaKnown RBP29.67■■■□□ 2.34
SSH1-209ENST00000551165 ZEB1P37275 1124 aaPredicted RBP29.66■■■□□ 2.34
SSH1-209ENST00000551165 SUPT6HQ7KZ85 1726 aaKnown RBP29.64■■■□□ 2.34
SSH1-209ENST00000551165 SHROOM2Q13796 1616 aa29.64■■■□□ 2.34
SSH1-209ENST00000551165 ERCC6L2Q5T890 1561 aa29.63■■■□□ 2.33
SSH1-209ENST00000551165 FGD6Q6ZV73 1430 aa29.6■■■□□ 2.33
SSH1-209ENST00000551165 ARHGEF11O15085 1522 aa29.59■■■□□ 2.33
SSH1-209ENST00000551165 CLASP1Q7Z460 1538 aa29.58■■■□□ 2.33
SSH1-209ENST00000551165 ABCA8O94911 1581 aa29.58■■■□□ 2.33
SSH1-209ENST00000551165 PTPRGP23470 1445 aa29.57■■■□□ 2.32
SSH1-209ENST00000551165 MYOM3Q5VTT5 1437 aa29.55■■■□□ 2.32
SSH1-209ENST00000551165 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.46■■■□□ 2.31
SSH1-209ENST00000551165 ATP10BO94823 1461 aa29.46■■■□□ 2.31
SSH1-209ENST00000551165 CDK11AQ9UQ88 783 aaPredicted RBP29.45■■■□□ 2.31
SSH1-209ENST00000551165 TROQ12816 1431 aaPredicted RBP29.42■■■□□ 2.3
SSH1-209ENST00000551165 PTPN23Q9H3S7 1636 aa29.42■■■□□ 2.3
SSH1-209ENST00000551165 PTPRKQ15262 1439 aa29.4■■■□□ 2.3
SSH1-209ENST00000551165 UACAQ9BZF9 1416 aa29.38■■■□□ 2.29
SSH1-209ENST00000551165 KIF14Q15058 1648 aa29.37■■■□□ 2.29
SSH1-209ENST00000551165 RAB3GAP2Q9H2M9 1393 aa29.37■■■□□ 2.29
SSH1-209ENST00000551165 DHX57Q6P158 1386 aaKnown RBP29.35■■■□□ 2.29
SSH1-209ENST00000551165 SETD5Q9C0A6 1442 aa29.33■■■□□ 2.29
SSH1-209ENST00000551165 TCOF1Q13428 1488 aaKnown RBP29.33■■■□□ 2.29
SSH1-209ENST00000551165 PLEKHD1A6NEE1 506 aa29.32■■■□□ 2.28
SSH1-209ENST00000551165 MIA2Q96PC5 1412 aa29.31■■■□□ 2.28
SSH1-209ENST00000551165 ZNF644Q9H582 1327 aaPredicted RBP29.29■■■□□ 2.28
SSH1-209ENST00000551165 ADCY10Q96PN6 1610 aa29.28■■■□□ 2.28
SSH1-209ENST00000551165 ABCC2Q92887 1545 aa29.26■■■□□ 2.27
SSH1-209ENST00000551165 OSCARQ8IYS5 282 aa29.26■■■□□ 2.27
SSH1-209ENST00000551165 GPATCH8Q9UKJ3 1502 aaKnown RBP29.23■■■□□ 2.27
SSH1-209ENST00000551165 CHIC2Q9UKJ5 165 aa29.21■■■□□ 2.27
SSH1-209ENST00000551165 ABCC10Q5T3U5 1492 aa29.19■■■□□ 2.26
SSH1-209ENST00000551165 CFDP1Q9UEE9 299 aaPredicted RBP29.18■■■□□ 2.26
SSH1-209ENST00000551165 HFM1A2PYH4 1435 aa29.15■■■□□ 2.26
SSH1-209ENST00000551165 ZNF777Q9ULD5 760 aaPredicted RBP29.14■■■□□ 2.26
SSH1-209ENST00000551165 ITSN2Q9NZM3 1697 aa29.14■■■□□ 2.25
SSH1-209ENST00000551165 RRP7BPQ9NSQ0 103 aa29.13■■■□□ 2.25
SSH1-209ENST00000551165 NAIPQ13075 1403 aa29.13■■■□□ 2.25
SSH1-209ENST00000551165 CDC42BPAQ5VT25 1732 aa29.12■■■□□ 2.25
SSH1-209ENST00000551165 UHRF1BP1LA0JNW5 1464 aa29.11■■■□□ 2.25
SSH1-209ENST00000551165 CAMSAP2Q08AD1 1489 aa29.11■■■□□ 2.25
SSH1-209ENST00000551165 ZCCHC11Q5TAX3 1644 aaKnown RBP29.1■■■□□ 2.25
SSH1-209ENST00000551165 ABCC5O15440 1437 aa29.09■■■□□ 2.25
SSH1-209ENST00000551165 DAPK1P53355 1430 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms