RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 EFCAB5A4FU69 1503 aa32.05■■■□□ 2.72
RITA1-201ENST00000548278 GRIN2BQ13224 1484 aa32.02■■■□□ 2.72
RITA1-201ENST00000548278 ZNF608Q9ULD9 1512 aaPredicted RBP32.02■■■□□ 2.72
RITA1-201ENST00000548278 FHAD1B1AJZ9 1412 aa32.01■■■□□ 2.71
RITA1-201ENST00000548278 ZEB1P37275 1124 aaPredicted RBP32.01■■■□□ 2.71
RITA1-201ENST00000548278 ADAMTS12P58397 1594 aa31.99■■■□□ 2.71
RITA1-201ENST00000548278 KANK4Q5T7N3 995 aaPredicted RBP31.98■■■□□ 2.71
RITA1-201ENST00000548278 MAP3K1Q13233 1512 aa31.93■■■□□ 2.7
RITA1-201ENST00000548278 P3H3Q8IVL6 736 aa31.93■■■□□ 2.7
RITA1-201ENST00000548278 FHOD3Q2V2M9 1422 aa31.93■■■□□ 2.7
RITA1-201ENST00000548278 SAMD9Q5K651 1589 aa31.88■■■□□ 2.69
RITA1-201ENST00000548278 EIF4G3O43432 1585 aaKnown RBP31.87■■■□□ 2.69
RITA1-201ENST00000548278 TIAM1Q13009 1591 aa31.87■■■□□ 2.69
RITA1-201ENST00000548278 PCF11O94913 1555 aaKnown RBP31.87■■■□□ 2.69
RITA1-201ENST00000548278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.85■■■□□ 2.69
RITA1-201ENST00000548278 FYCO1Q9BQS8 1478 aa31.79■■■□□ 2.68
RITA1-201ENST00000548278 CASKIN1Q8WXD9 1431 aa31.79■■■□□ 2.68
RITA1-201ENST00000548278 SNAPC4Q5SXM2 1469 aa31.78■■■□□ 2.68
RITA1-201ENST00000548278 CFAP43Q8NDM7 1665 aa31.77■■■□□ 2.68
RITA1-201ENST00000548278 FMN1Q68DA7 1419 aa31.77■■■□□ 2.68
RITA1-201ENST00000548278 CCER1Q8TC90 406 aaPredicted RBP31.75■■■□□ 2.67
RITA1-201ENST00000548278 LRRC9Q6ZRR7 1453 aa31.74■■■□□ 2.67
RITA1-201ENST00000548278 IQGAP2Q13576 1575 aa31.74■■■□□ 2.67
RITA1-201ENST00000548278 HNRNPUL2Q1KMD3 747 aaKnown RBP31.73■■■□□ 2.67
RITA1-201ENST00000548278 RRBP1Q9P2E9 1410 aaKnown RBP31.73■■■□□ 2.67
RITA1-201ENST00000548278 MAGI1Q96QZ7 1491 aaPredicted RBP31.68■■■□□ 2.66
RITA1-201ENST00000548278 GRIN2AQ12879 1464 aa31.65■■■□□ 2.66
RITA1-201ENST00000548278 ATP1B4Q9UN42 357 aaPredicted RBP31.63■■■□□ 2.65
RITA1-201ENST00000548278 UGGT2Q9NYU1 1516 aa31.6■■■□□ 2.65
RITA1-201ENST00000548278 KIAA0586Q9BVV6 1533 aa31.59■■■□□ 2.65
RITA1-201ENST00000548278 CCNB3Q8WWL7 1395 aa31.59■■■□□ 2.65
RITA1-201ENST00000548278 SYNJ2O15056 1496 aa31.58■■■□□ 2.65
RITA1-201ENST00000548278 LRRIQ1Q96JM4 1722 aa31.53■■■□□ 2.64
RITA1-201ENST00000548278 PHLDB1Q86UU1 1377 aa31.5■■■□□ 2.63
RITA1-201ENST00000548278 CHMP7Q8WUX9 453 aaPredicted RBP31.49■■■□□ 2.63
RITA1-201ENST00000548278 CEP170Q5SW79 1584 aa31.46■■■□□ 2.63
RITA1-201ENST00000548278 DISP1Q96F81 1524 aa31.44■■■□□ 2.62
RITA1-201ENST00000548278 KIAA0556O60303 1618 aa31.42■■■□□ 2.62
RITA1-201ENST00000548278 NUP160Q12769 1436 aa31.4■■■□□ 2.62
RITA1-201ENST00000548278 HECW1Q76N89 1606 aa31.38■■■□□ 2.61
RITA1-201ENST00000548278 FBLN2P98095 1184 aa31.37■■■□□ 2.61
RITA1-201ENST00000548278 CCDC18Q5T9S5 1454 aa31.36■■■□□ 2.61
RITA1-201ENST00000548278 MTUS2Q5JR59 1369 aa31.36■■■□□ 2.61
RITA1-201ENST00000548278 EHBP1L1Q8N3D4 1523 aa31.3■■■□□ 2.6
RITA1-201ENST00000548278 EPRSP07814 1512 aaKnown RBP31.29■■■□□ 2.6
RITA1-201ENST00000548278 MAGI3Q5TCQ9 1506 aa31.26■■■□□ 2.59
RITA1-201ENST00000548278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.25■■■□□ 2.59
RITA1-201ENST00000548278 SUPT6HQ7KZ85 1726 aaKnown RBP31.25■■■□□ 2.59
RITA1-201ENST00000548278 ITGAEP38570 1179 aa31.25■■■□□ 2.59
RITA1-201ENST00000548278 NCOA2Q15596 1464 aa31.24■■■□□ 2.59
RITA1-201ENST00000548278 FAM50AQ14320 339 aaKnown RBP31.22■■■□□ 2.59
RITA1-201ENST00000548278 FGD6Q6ZV73 1430 aa31.22■■■□□ 2.59
RITA1-201ENST00000548278 JPH4Q96JJ6 628 aa31.2■■■□□ 2.59
RITA1-201ENST00000548278 CDK13Q14004 1512 aaKnown RBP31.2■■■□□ 2.58
RITA1-201ENST00000548278 ARHGEF11O15085 1522 aa31.19■■■□□ 2.58
RITA1-201ENST00000548278 RAPGEF6Q8TEU7 1601 aa31.17■■■□□ 2.58
RITA1-201ENST00000548278 DHX57Q6P158 1386 aaKnown RBP31.17■■■□□ 2.58
RITA1-201ENST00000548278 CARMIL2Q6F5E8 1435 aa31.15■■■□□ 2.58
RITA1-201ENST00000548278 MYOM3Q5VTT5 1437 aa31.14■■■□□ 2.58
RITA1-201ENST00000548278 NUP153P49790 1475 aaKnown RBP31.14■■■□□ 2.58
RITA1-201ENST00000548278 CHD1O14646 1710 aa31.1■■■□□ 2.57
RITA1-201ENST00000548278 CLSPNQ9HAW4 1339 aa31.1■■■□□ 2.57
RITA1-201ENST00000548278 RAB3GAP2Q9H2M9 1393 aa31.08■■■□□ 2.57
RITA1-201ENST00000548278 SETD5Q9C0A6 1442 aa31.07■■■□□ 2.56
RITA1-201ENST00000548278 ARID3CA6NKF2 412 aa31.06■■■□□ 2.56
RITA1-201ENST00000548278 PLB1Q6P1J6 1458 aa31.03■■■□□ 2.56
RITA1-201ENST00000548278 PTPN23Q9H3S7 1636 aa31■■■□□ 2.55
RITA1-201ENST00000548278 TCOF1Q13428 1488 aaKnown RBP30.95■■■□□ 2.55
RITA1-201ENST00000548278 PRG4Q92954 1404 aaPredicted RBP30.94■■■□□ 2.54
RITA1-201ENST00000548278 ABCA8O94911 1581 aa30.94■■■□□ 2.54
RITA1-201ENST00000548278 PTPRKQ15262 1439 aa30.94■■■□□ 2.54
RITA1-201ENST00000548278 CDK11AQ9UQ88 783 aaPredicted RBP30.92■■■□□ 2.54
RITA1-201ENST00000548278 MIA2Q96PC5 1412 aa30.91■■■□□ 2.54
RITA1-201ENST00000548278 SHROOM2Q13796 1616 aa30.89■■■□□ 2.54
RITA1-201ENST00000548278 TROQ12816 1431 aaPredicted RBP30.86■■■□□ 2.53
RITA1-201ENST00000548278 HFM1A2PYH4 1435 aa30.83■■■□□ 2.53
RITA1-201ENST00000548278 MAPKBP1O60336 1514 aa30.82■■■□□ 2.52
RITA1-201ENST00000548278 PTPRGP23470 1445 aa30.81■■■□□ 2.52
RITA1-201ENST00000548278 ADCY10Q96PN6 1610 aa30.79■■■□□ 2.52
RITA1-201ENST00000548278 ATP10BO94823 1461 aa30.77■■■□□ 2.52
RITA1-201ENST00000548278 NAIPQ13075 1403 aa30.75■■■□□ 2.51
RITA1-201ENST00000548278 CLASP1Q7Z460 1538 aa30.73■■■□□ 2.51
RITA1-201ENST00000548278 KIF14Q15058 1648 aa30.73■■■□□ 2.51
RITA1-201ENST00000548278 ERCC6L2Q5T890 1561 aa30.69■■■□□ 2.5
RITA1-201ENST00000548278 ZNF316A6NFI3 1004 aaPredicted RBP30.68■■■□□ 2.5
RITA1-201ENST00000548278 AKNAQ7Z591 1439 aa30.67■■■□□ 2.5
RITA1-201ENST00000548278 ITSN2Q9NZM3 1697 aa30.67■■■□□ 2.5
RITA1-201ENST00000548278 PLEKHD1A6NEE1 506 aa30.66■■■□□ 2.5
RITA1-201ENST00000548278 GPATCH8Q9UKJ3 1502 aaKnown RBP30.66■■■□□ 2.5
RITA1-201ENST00000548278 GCC2Q8IWJ2 1684 aa30.65■■■□□ 2.5
RITA1-201ENST00000548278 UACAQ9BZF9 1416 aa30.64■■■□□ 2.5
RITA1-201ENST00000548278 DNMT1P26358 1616 aaKnown RBP30.63■■■□□ 2.49
RITA1-201ENST00000548278 DAPK1P53355 1430 aa30.62■■■□□ 2.49
RITA1-201ENST00000548278 ZNF644Q9H582 1327 aaPredicted RBP30.62■■■□□ 2.49
RITA1-201ENST00000548278 CHIC2Q9UKJ5 165 aa30.61■■■□□ 2.49
RITA1-201ENST00000548278 RRP7BPQ9NSQ0 103 aa30.59■■■□□ 2.49
RITA1-201ENST00000548278 ABCC10Q5T3U5 1492 aa30.59■■■□□ 2.49
RITA1-201ENST00000548278 ABCC5O15440 1437 aa30.59■■■□□ 2.49
RITA1-201ENST00000548278 CFDP1Q9UEE9 299 aaPredicted RBP30.58■■■□□ 2.49
RITA1-201ENST00000548278 CAMSAP2Q08AD1 1489 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms