RNA–Protein interactions for RNA: ENST00000545595.6

CACNA2D4-217, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 1 (best)

Gene CACNA2D4, Length 1,615 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-217ENST00000545595 RANGAP1P46060 587 aaPredicted RBP24.62■■□□□ 1.53
CACNA2D4-217ENST00000545595 MAGI1Q96QZ7 1491 aaPredicted RBP24.6■■□□□ 1.53
CACNA2D4-217ENST00000545595 SNAPC4Q5SXM2 1469 aa24.56■■□□□ 1.52
CACNA2D4-217ENST00000545595 PPARGC1BQ86YN6 1023 aaKnown RBP24.53■■□□□ 1.52
CACNA2D4-217ENST00000545595 EFCAB5A4FU69 1503 aa24.49■■□□□ 1.51
CACNA2D4-217ENST00000545595 SYNJ2O15056 1496 aa24.48■■□□□ 1.51
CACNA2D4-217ENST00000545595 GRIN2AQ12879 1464 aa24.45■■□□□ 1.5
CACNA2D4-217ENST00000545595 SAMD9Q5K651 1589 aa24.42■■□□□ 1.5
CACNA2D4-217ENST00000545595 CHMP7Q8WUX9 453 aaPredicted RBP24.37■■□□□ 1.49
CACNA2D4-217ENST00000545595 IQGAP2Q13576 1575 aa24.36■■□□□ 1.49
CACNA2D4-217ENST00000545595 KIAA0586Q9BVV6 1533 aa24.34■■□□□ 1.49
CACNA2D4-217ENST00000545595 FHOD3Q2V2M9 1422 aa24.34■■□□□ 1.49
CACNA2D4-217ENST00000545595 NUP160Q12769 1436 aa24.32■■□□□ 1.48
CACNA2D4-217ENST00000545595 APLP2Q06481 763 aa24.32■■□□□ 1.48
CACNA2D4-217ENST00000545595 PCF11O94913 1555 aaKnown RBP24.31■■□□□ 1.48
CACNA2D4-217ENST00000545595 TTBK1Q5TCY1 1321 aaPredicted RBP24.31■■□□□ 1.48
CACNA2D4-217ENST00000545595 CEP170Q5SW79 1584 aa24.28■■□□□ 1.48
CACNA2D4-217ENST00000545595 UGGT2Q9NYU1 1516 aa24.27■■□□□ 1.47
CACNA2D4-217ENST00000545595 MAP3K1Q13233 1512 aa24.26■■□□□ 1.47
CACNA2D4-217ENST00000545595 P3H3Q8IVL6 736 aa24.25■■□□□ 1.47
CACNA2D4-217ENST00000545595 TIAM1Q13009 1591 aa24.24■■□□□ 1.47
CACNA2D4-217ENST00000545595 CFAP43Q8NDM7 1665 aa24.24■■□□□ 1.47
CACNA2D4-217ENST00000545595 FYCO1Q9BQS8 1478 aa24.24■■□□□ 1.47
CACNA2D4-217ENST00000545595 FBLN2P98095 1184 aa24.23■■□□□ 1.47
CACNA2D4-217ENST00000545595 FMN1Q68DA7 1419 aa24.22■■□□□ 1.47
CACNA2D4-217ENST00000545595 CHD1O14646 1710 aa24.2■■□□□ 1.46
CACNA2D4-217ENST00000545595 CASKIN1Q8WXD9 1431 aa24.2■■□□□ 1.46
CACNA2D4-217ENST00000545595 KANK4Q5T7N3 995 aaPredicted RBP24.15■■□□□ 1.46
CACNA2D4-217ENST00000545595 KIAA0556O60303 1618 aa24.13■■□□□ 1.45
CACNA2D4-217ENST00000545595 DISP1Q96F81 1524 aa24.11■■□□□ 1.45
CACNA2D4-217ENST00000545595 LRRIQ1Q96JM4 1722 aa24.11■■□□□ 1.45
CACNA2D4-217ENST00000545595 HRCP23327 699 aa24.09■■□□□ 1.45
CACNA2D4-217ENST00000545595 LRRC9Q6ZRR7 1453 aa24.08■■□□□ 1.45
CACNA2D4-217ENST00000545595 JPH4Q96JJ6 628 aa24.07■■□□□ 1.44
CACNA2D4-217ENST00000545595 CARMIL2Q6F5E8 1435 aa24.02■■□□□ 1.44
CACNA2D4-217ENST00000545595 HECW1Q76N89 1606 aa24.02■■□□□ 1.44
CACNA2D4-217ENST00000545595 SHROOM2Q13796 1616 aa24.01■■□□□ 1.43
CACNA2D4-217ENST00000545595 CLASP1Q7Z460 1538 aa23.98■■□□□ 1.43
CACNA2D4-217ENST00000545595 RRBP1Q9P2E9 1410 aaKnown RBP23.98■■□□□ 1.43
CACNA2D4-217ENST00000545595 ATP1B4Q9UN42 357 aaPredicted RBP23.97■■□□□ 1.43
CACNA2D4-217ENST00000545595 CCDC18Q5T9S5 1454 aa23.95■■□□□ 1.42
CACNA2D4-217ENST00000545595 PRG4Q92954 1404 aaPredicted RBP23.92■■□□□ 1.42
CACNA2D4-217ENST00000545595 RAPGEF6Q8TEU7 1601 aa23.91■■□□□ 1.42
CACNA2D4-217ENST00000545595 EPRSP07814 1512 aaKnown RBP23.88■■□□□ 1.41
CACNA2D4-217ENST00000545595 EHBP1L1Q8N3D4 1523 aa23.88■■□□□ 1.41
CACNA2D4-217ENST00000545595 PHLDB1Q86UU1 1377 aa23.86■■□□□ 1.41
CACNA2D4-217ENST00000545595 CCNB3Q8WWL7 1395 aa23.86■■□□□ 1.41
CACNA2D4-217ENST00000545595 MAGI3Q5TCQ9 1506 aa23.85■■□□□ 1.41
CACNA2D4-217ENST00000545595 CDK13Q14004 1512 aaKnown RBP23.84■■□□□ 1.41
CACNA2D4-217ENST00000545595 MTUS2Q5JR59 1369 aa23.83■■□□□ 1.41
CACNA2D4-217ENST00000545595 SUPT6HQ7KZ85 1726 aaKnown RBP23.83■■□□□ 1.41
CACNA2D4-217ENST00000545595 NUP153P49790 1475 aaKnown RBP23.83■■□□□ 1.4
CACNA2D4-217ENST00000545595 HNRNPUL2Q1KMD3 747 aaKnown RBP23.8■■□□□ 1.4
CACNA2D4-217ENST00000545595 OSCARQ8IYS5 282 aa23.78■■□□□ 1.4
CACNA2D4-217ENST00000545595 ABCA8O94911 1581 aa23.77■■□□□ 1.4
CACNA2D4-217ENST00000545595 ARHGEF11O15085 1522 aa23.77■■□□□ 1.4
CACNA2D4-217ENST00000545595 PTPRGP23470 1445 aa23.77■■□□□ 1.4
CACNA2D4-217ENST00000545595 PLB1Q6P1J6 1458 aa23.77■■□□□ 1.39
CACNA2D4-217ENST00000545595 NCOA2Q15596 1464 aa23.76■■□□□ 1.39
CACNA2D4-217ENST00000545595 ERCC6L2Q5T890 1561 aa23.73■■□□□ 1.39
CACNA2D4-217ENST00000545595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.73■■□□□ 1.39
CACNA2D4-217ENST00000545595 ZEB1P37275 1124 aaPredicted RBP23.7■■□□□ 1.39
CACNA2D4-217ENST00000545595 FGD6Q6ZV73 1430 aa23.69■■□□□ 1.38
CACNA2D4-217ENST00000545595 MYOM3Q5VTT5 1437 aa23.68■■□□□ 1.38
CACNA2D4-217ENST00000545595 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.67■■□□□ 1.387e-7■□□□□ 10.9
CACNA2D4-217ENST00000545595 UACAQ9BZF9 1416 aa23.65■■□□□ 1.38
CACNA2D4-217ENST00000545595 ARID3CA6NKF2 412 aa23.65■■□□□ 1.38
CACNA2D4-217ENST00000545595 CCER1Q8TC90 406 aaPredicted RBP23.64■■□□□ 1.38
CACNA2D4-217ENST00000545595 CDK11AQ9UQ88 783 aaPredicted RBP23.62■■□□□ 1.37
CACNA2D4-217ENST00000545595 ADCY10Q96PN6 1610 aa23.61■■□□□ 1.37
CACNA2D4-217ENST00000545595 PTPN23Q9H3S7 1636 aa23.6■■□□□ 1.37
CACNA2D4-217ENST00000545595 ABCC2Q92887 1545 aa23.6■■□□□ 1.37
CACNA2D4-217ENST00000545595 ATP10BO94823 1461 aa23.6■■□□□ 1.37
CACNA2D4-217ENST00000545595 UHRF1BP1LA0JNW5 1464 aa23.59■■□□□ 1.37
CACNA2D4-217ENST00000545595 TROQ12816 1431 aaPredicted RBP23.58■■□□□ 1.37
CACNA2D4-217ENST00000545595 FAM50AQ14320 339 aaKnown RBP23.58■■□□□ 1.36
CACNA2D4-217ENST00000545595 TCOF1Q13428 1488 aaKnown RBP23.55■■□□□ 1.36
CACNA2D4-217ENST00000545595 ITGAEP38570 1179 aa23.53■■□□□ 1.36
CACNA2D4-217ENST00000545595 KIF14Q15058 1648 aa23.52■■□□□ 1.36
CACNA2D4-217ENST00000545595 MIA2Q96PC5 1412 aa23.52■■□□□ 1.36
CACNA2D4-217ENST00000545595 ITSN2Q9NZM3 1697 aa23.49■■□□□ 1.35
CACNA2D4-217ENST00000545595 KDM5BQ9UGL1 1544 aa23.48■■□□□ 1.35
CACNA2D4-217ENST00000545595 PLEKHD1A6NEE1 506 aa23.48■■□□□ 1.35
CACNA2D4-217ENST00000545595 SETD5Q9C0A6 1442 aa23.44■■□□□ 1.34
CACNA2D4-217ENST00000545595 PTPRKQ15262 1439 aa23.43■■□□□ 1.34
CACNA2D4-217ENST00000545595 RAB3GAP2Q9H2M9 1393 aa23.43■■□□□ 1.34
CACNA2D4-217ENST00000545595 DHX57Q6P158 1386 aaKnown RBP23.42■■□□□ 1.34
CACNA2D4-217ENST00000545595 ABCC10Q5T3U5 1492 aa23.41■■□□□ 1.34
CACNA2D4-217ENST00000545595 CDC42BPAQ5VT25 1732 aa23.4■■□□□ 1.34
CACNA2D4-217ENST00000545595 ZCCHC11Q5TAX3 1644 aaKnown RBP23.4■■□□□ 1.34
CACNA2D4-217ENST00000545595 GPATCH8Q9UKJ3 1502 aaKnown RBP23.39■■□□□ 1.33
CACNA2D4-217ENST00000545595 DNMT1P26358 1616 aaKnown RBP23.36■■□□□ 1.33
CACNA2D4-217ENST00000545595 HFM1A2PYH4 1435 aa23.36■■□□□ 1.33
CACNA2D4-217ENST00000545595 GCC2Q8IWJ2 1684 aa23.33■■□□□ 1.33
CACNA2D4-217ENST00000545595 CAMSAP2Q08AD1 1489 aa23.32■■□□□ 1.32
CACNA2D4-217ENST00000545595 CLSPNQ9HAW4 1339 aa23.31■■□□□ 1.32
CACNA2D4-217ENST00000545595 AKNAQ7Z591 1439 aa23.31■■□□□ 1.32
CACNA2D4-217ENST00000545595 DAPK1P53355 1430 aa23.29■■□□□ 1.32
CACNA2D4-217ENST00000545595 NAIPQ13075 1403 aa23.29■■□□□ 1.32
CACNA2D4-217ENST00000545595 PREX2Q70Z35 1606 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms