RNA–Protein interactions for RNA: ENST00000545595.6

CACNA2D4-217, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 1 (best)

Gene CACNA2D4, Length 1,615 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-217ENST00000545595 NISCHQ9Y2I1 1504 aa35.54■■■■□ 3.28
CACNA2D4-217ENST00000545595 CCDC180Q9P1Z9 1646 aa31.1■■■□□ 2.57
CACNA2D4-217ENST00000545595 ZCCHC6Q5VYS8 1495 aaKnown RBP29.9■■■□□ 2.38
CACNA2D4-217ENST00000545595 DCAF1Q9Y4B6 1507 aa29.49■■■□□ 2.31
CACNA2D4-217ENST00000545595 ABCC9O60706 1549 aa29.36■■■□□ 2.29
CACNA2D4-217ENST00000545595 MYO15BQ96JP2 1530 aa29.22■■■□□ 2.27
CACNA2D4-217ENST00000545595 DCAF8L2P0C7V8 631 aa29.17■■■□□ 2.26
CACNA2D4-217ENST00000545595 NACADO15069 1562 aa29■■■□□ 2.23
CACNA2D4-217ENST00000545595 SHROOM4Q9ULL8 1493 aa28.99■■■□□ 2.23
CACNA2D4-217ENST00000545595 RB1CC1Q8TDY2 1594 aa28.74■■■□□ 2.19
CACNA2D4-217ENST00000545595 SCRIBQ14160 1630 aa28.48■■■□□ 2.15
CACNA2D4-217ENST00000545595 UNC13AQ9UPW8 1703 aa28.13■■■□□ 2.09
CACNA2D4-217ENST00000545595 SUPT5HO00267 1087 aaKnown RBP27.9■■■□□ 2.06
CACNA2D4-217ENST00000545595 BICRAQ9NZM4 1560 aa27.86■■■□□ 2.05
CACNA2D4-217ENST00000545595 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
CACNA2D4-217ENST00000545595 CECR2Q9BXF3 1484 aa27.59■■■□□ 2.01
CACNA2D4-217ENST00000545595 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2.01
CACNA2D4-217ENST00000545595 MROH2BQ7Z745 1585 aa27.46■■□□□ 1.99
CACNA2D4-217ENST00000545595 BAZ1AQ9NRL2 1556 aaPredicted RBP27.46■■□□□ 1.99
CACNA2D4-217ENST00000545595 SMARCA4P51532 1647 aa27.33■■□□□ 1.97
CACNA2D4-217ENST00000545595 WIZO95785 1651 aa27.27■■□□□ 1.96
CACNA2D4-217ENST00000545595 PEG3Q9GZU2 1588 aa27.09■■□□□ 1.93
CACNA2D4-217ENST00000545595 EIF4G1Q04637 1599 aaKnown RBP27.03■■□□□ 1.92
CACNA2D4-217ENST00000545595 TOP2AP11388 1531 aaKnown RBP26.99■■□□□ 1.91
CACNA2D4-217ENST00000545595 SMARCA2P51531 1590 aa26.93■■□□□ 1.9
CACNA2D4-217ENST00000545595 ATAD2BQ9ULI0 1458 aa26.92■■□□□ 1.9
CACNA2D4-217ENST00000545595 CHIC1Q5VXU3 224 aa26.8■■□□□ 1.88
CACNA2D4-217ENST00000545595 NCAPD3P42695 1498 aa26.76■■□□□ 1.87
CACNA2D4-217ENST00000545595 BAZ1BQ9UIG0 1483 aaKnown RBP26.73■■□□□ 1.87
CACNA2D4-217ENST00000545595 HMGXB3Q12766 1538 aa26.72■■□□□ 1.87
CACNA2D4-217ENST00000545595 CCDC88BA6NC98 1476 aa26.66■■□□□ 1.86
CACNA2D4-217ENST00000545595 CC2D2AQ9P2K1 1620 aa26.64■■□□□ 1.85
CACNA2D4-217ENST00000545595 TRIM41Q8WV44 630 aa26.21■■□□□ 1.79
CACNA2D4-217ENST00000545595 ABCC8Q09428 1581 aa26.18■■□□□ 1.78
CACNA2D4-217ENST00000545595 CFTRP13569 1480 aa26.11■■□□□ 1.77
CACNA2D4-217ENST00000545595 DNAJC5BQ9UF47 199 aa26.03■■□□□ 1.76
CACNA2D4-217ENST00000545595 CADPSQ9ULU8 1353 aa26.02■■□□□ 1.76
CACNA2D4-217ENST00000545595 PRDM2Q13029 1718 aa25.99■■□□□ 1.75
CACNA2D4-217ENST00000545595 WRNQ14191 1432 aaPredicted RBP eCLIP25.95■■□□□ 1.74
CACNA2D4-217ENST00000545595 SYNJ1O43426 1573 aa25.91■■□□□ 1.74
CACNA2D4-217ENST00000545595 LAMC3Q9Y6N6 1575 aa25.86■■□□□ 1.73
CACNA2D4-217ENST00000545595 TOP2BQ02880 1626 aa25.79■■□□□ 1.72
CACNA2D4-217ENST00000545595 BIVM-ERCC5R4GMW8 1640 aa25.79■■□□□ 1.72
CACNA2D4-217ENST00000545595 LOC105371045A0A1W2PR82 267 aa25.75■■□□□ 1.71
CACNA2D4-217ENST00000545595 NESP48681 1621 aa25.75■■□□□ 1.71
CACNA2D4-217ENST00000545595 FAM9AQ8IZU1 332 aaPredicted RBP25.74■■□□□ 1.71
CACNA2D4-217ENST00000545595 FANCD2Q9BXW9 1451 aa25.7■■□□□ 1.71
CACNA2D4-217ENST00000545595 CUX1P39880 1505 aa25.68■■□□□ 1.7
CACNA2D4-217ENST00000545595 SOGA1O94964 1423 aa25.66■■□□□ 1.7
CACNA2D4-217ENST00000545595 PDS5BQ9NTI5 1447 aa25.64■■□□□ 1.7
CACNA2D4-217ENST00000545595 EEA1Q15075 1411 aa25.64■■□□□ 1.69
CACNA2D4-217ENST00000545595 RUSC2Q8N2Y8 1516 aa25.58■■□□□ 1.69
CACNA2D4-217ENST00000545595 CEP164Q9UPV0 1460 aa25.56■■□□□ 1.68
CACNA2D4-217ENST00000545595 DNMBPQ6XZF7 1577 aa25.48■■□□□ 1.67
CACNA2D4-217ENST00000545595 KIF21AQ7Z4S6 1674 aa25.47■■□□□ 1.67
CACNA2D4-217ENST00000545595 TOPBP1Q92547 1522 aa25.42■■□□□ 1.66
CACNA2D4-217ENST00000545595 CSRNP3Q8WYN3 585 aa25.41■■□□□ 1.66
CACNA2D4-217ENST00000545595 URB2Q14146 1524 aaKnown RBP25.39■■□□□ 1.65
CACNA2D4-217ENST00000545595 KIF21BO75037 1637 aa25.37■■□□□ 1.65
CACNA2D4-217ENST00000545595 FGD5Q6ZNL6 1462 aa25.36■■□□□ 1.65
CACNA2D4-217ENST00000545595 EHMT2Q96KQ7 1210 aa25.36■■□□□ 1.65
CACNA2D4-217ENST00000545595 GOLGA3Q08378 1498 aa25.3■■□□□ 1.64
CACNA2D4-217ENST00000545595 MRC2Q9UBG0 1479 aa25.3■■□□□ 1.64
CACNA2D4-217ENST00000545595 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
CACNA2D4-217ENST00000545595 KIF27Q86VH2 1401 aa25.27■■□□□ 1.64
CACNA2D4-217ENST00000545595 TNIKQ9UKE5 1360 aa25.22■■□□□ 1.63
CACNA2D4-217ENST00000545595 ERCC6Q03468 1493 aa25.21■■□□□ 1.63
CACNA2D4-217ENST00000545595 WDR62O43379 1518 aa25.2■■□□□ 1.63
CACNA2D4-217ENST00000545595 ABCA10Q8WWZ4 1543 aa25.2■■□□□ 1.63
CACNA2D4-217ENST00000545595 CUX2O14529 1486 aa25.19■■□□□ 1.62
CACNA2D4-217ENST00000545595 PRXQ9BXM0 1461 aa25.16■■□□□ 1.62
CACNA2D4-217ENST00000545595 ERICH3Q5RHP9 1530 aa25.16■■□□□ 1.62
CACNA2D4-217ENST00000545595 RAPGEF2Q9Y4G8 1499 aa25.15■■□□□ 1.62
CACNA2D4-217ENST00000545595 WDR97A6NE52 1622 aa25.15■■□□□ 1.62
CACNA2D4-217ENST00000545595 RAD54L2Q9Y4B4 1467 aa25.14■■□□□ 1.62
CACNA2D4-217ENST00000545595 THOC2Q8NI27 1593 aaKnown RBP25.13■■□□□ 1.61
CACNA2D4-217ENST00000545595 CEP162Q5TB80 1403 aa25.11■■□□□ 1.61
CACNA2D4-217ENST00000545595 TARBP1Q13395 1621 aaKnown RBP25.07■■□□□ 1.6
CACNA2D4-217ENST00000545595 UBTFP17480 764 aaKnown RBP25.07■■□□□ 1.6
CACNA2D4-217ENST00000545595 IGF1RP08069 1367 aa25.03■■□□□ 1.6
CACNA2D4-217ENST00000545595 IFT140Q96RY7 1462 aa24.99■■□□□ 1.59
CACNA2D4-217ENST00000545595 ABCA5Q8WWZ7 1642 aa24.99■■□□□ 1.59
CACNA2D4-217ENST00000545595 GAPVD1Q14C86 1478 aa24.92■■□□□ 1.58
CACNA2D4-217ENST00000545595 CUL7Q14999 1698 aa24.91■■□□□ 1.58
CACNA2D4-217ENST00000545595 TDRD9Q8NDG6 1382 aaKnown RBP24.9■■□□□ 1.58
CACNA2D4-217ENST00000545595 CARMIL1Q5VZK9 1371 aa24.89■■□□□ 1.57
CACNA2D4-217ENST00000545595 CLIP1P30622 1438 aa24.88■■□□□ 1.57
CACNA2D4-217ENST00000545595 PBRM1Q86U86 1689 aa24.8■■□□□ 1.56
CACNA2D4-217ENST00000545595 ZNF608Q9ULD9 1512 aaPredicted RBP24.78■■□□□ 1.56
CACNA2D4-217ENST00000545595 AQRO60306 1485 aaKnown RBP eCLIP24.78■■□□□ 1.561e-6■■■■□ 23.9
CACNA2D4-217ENST00000545595 GRIN2BQ13224 1484 aa24.76■■□□□ 1.55
CACNA2D4-217ENST00000545595 EIF4G3O43432 1585 aaKnown RBP24.73■■□□□ 1.55
CACNA2D4-217ENST00000545595 VPS8Q8N3P4 1428 aa24.7■■□□□ 1.54
CACNA2D4-217ENST00000545595 CTTNBP2Q8WZ74 1663 aa24.69■■□□□ 1.54
CACNA2D4-217ENST00000545595 ARAP1Q96P48 1450 aa24.67■■□□□ 1.54
CACNA2D4-217ENST00000545595 FHAD1B1AJZ9 1412 aa24.67■■□□□ 1.54
CACNA2D4-217ENST00000545595 PCGF6Q9BYE7 350 aa24.67■■□□□ 1.54
CACNA2D4-217ENST00000545595 TRIM26Q12899 539 aaPredicted RBP24.66■■□□□ 1.54
CACNA2D4-217ENST00000545595 ADAMTS12P58397 1594 aa24.65■■□□□ 1.54
CACNA2D4-217ENST00000545595 ARHGAP35Q9NRY4 1499 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms