RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 THOC2Q8NI27 1593 aaKnown RBP22.69■■□□□ 1.22
TSFM-207ENST00000540550 FHAD1B1AJZ9 1412 aa22.64■■□□□ 1.21
TSFM-207ENST00000540550 AQRO60306 1485 aaKnown RBP eCLIP22.64■■□□□ 1.211e-6■■■■■ 37.7
TSFM-207ENST00000540550 ADAMTS12P58397 1594 aa22.63■■□□□ 1.21
TSFM-207ENST00000540550 GRIN2BQ13224 1484 aa22.62■■□□□ 1.21
TSFM-207ENST00000540550 MAP3K1Q13233 1512 aa22.58■■□□□ 1.21
TSFM-207ENST00000540550 TIAM1Q13009 1591 aa22.57■■□□□ 1.2
TSFM-207ENST00000540550 PCF11O94913 1555 aaKnown RBP22.57■■□□□ 1.2
TSFM-207ENST00000540550 FHOD3Q2V2M9 1422 aa22.57■■□□□ 1.2
TSFM-207ENST00000540550 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
TSFM-207ENST00000540550 KANK4Q5T7N3 995 aaPredicted RBP22.56■■□□□ 1.2
TSFM-207ENST00000540550 P3H3Q8IVL6 736 aa22.56■■□□□ 1.2
TSFM-207ENST00000540550 SAMD9Q5K651 1589 aa22.55■■□□□ 1.2
TSFM-207ENST00000540550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.55■■□□□ 1.2
TSFM-207ENST00000540550 CCER1Q8TC90 406 aaPredicted RBP22.55■■□□□ 1.2
TSFM-207ENST00000540550 EIF4G3O43432 1585 aaKnown RBP22.54■■□□□ 1.2
TSFM-207ENST00000540550 CFAP43Q8NDM7 1665 aa22.54■■□□□ 1.2
TSFM-207ENST00000540550 FYCO1Q9BQS8 1478 aa22.51■■□□□ 1.19
TSFM-207ENST00000540550 FMN1Q68DA7 1419 aa22.49■■□□□ 1.19
TSFM-207ENST00000540550 HNRNPUL2Q1KMD3 747 aaKnown RBP22.48■■□□□ 1.19
TSFM-207ENST00000540550 CASKIN1Q8WXD9 1431 aa22.47■■□□□ 1.19
TSFM-207ENST00000540550 IQGAP2Q13576 1575 aa22.47■■□□□ 1.19
TSFM-207ENST00000540550 SNAPC4Q5SXM2 1469 aa22.45■■□□□ 1.18
TSFM-207ENST00000540550 LRRC9Q6ZRR7 1453 aa22.44■■□□□ 1.18
TSFM-207ENST00000540550 RRBP1Q9P2E9 1410 aaKnown RBP22.42■■□□□ 1.18
TSFM-207ENST00000540550 ATP1B4Q9UN42 357 aaPredicted RBP22.42■■□□□ 1.18
TSFM-207ENST00000540550 MAGI1Q96QZ7 1491 aaPredicted RBP22.39■■□□□ 1.17
TSFM-207ENST00000540550 GRIN2AQ12879 1464 aa22.35■■□□□ 1.17
TSFM-207ENST00000540550 CCNB3Q8WWL7 1395 aa22.35■■□□□ 1.17
TSFM-207ENST00000540550 UGGT2Q9NYU1 1516 aa22.32■■□□□ 1.16
TSFM-207ENST00000540550 KIAA0586Q9BVV6 1533 aa22.31■■□□□ 1.16
TSFM-207ENST00000540550 SYNJ2O15056 1496 aa22.3■■□□□ 1.16
TSFM-207ENST00000540550 LRRIQ1Q96JM4 1722 aa22.3■■□□□ 1.16
TSFM-207ENST00000540550 HECW1Q76N89 1606 aa22.26■■□□□ 1.15
TSFM-207ENST00000540550 CHMP7Q8WUX9 453 aaPredicted RBP22.25■■□□□ 1.15
TSFM-207ENST00000540550 PHLDB1Q86UU1 1377 aa22.25■■□□□ 1.15
TSFM-207ENST00000540550 KIAA0556O60303 1618 aa22.23■■□□□ 1.15
TSFM-207ENST00000540550 CCDC18Q5T9S5 1454 aa22.23■■□□□ 1.15
TSFM-207ENST00000540550 MTUS2Q5JR59 1369 aa22.21■■□□□ 1.15
TSFM-207ENST00000540550 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
TSFM-207ENST00000540550 EHBP1L1Q8N3D4 1523 aa22.18■■□□□ 1.14
TSFM-207ENST00000540550 FBLN2P98095 1184 aa22.18■■□□□ 1.14
TSFM-207ENST00000540550 DISP1Q96F81 1524 aa22.17■■□□□ 1.14
TSFM-207ENST00000540550 SUPT6HQ7KZ85 1726 aaKnown RBP22.17■■□□□ 1.14
TSFM-207ENST00000540550 ITGAEP38570 1179 aa22.14■■□□□ 1.14
TSFM-207ENST00000540550 NUP160Q12769 1436 aa22.13■■□□□ 1.13
TSFM-207ENST00000540550 FAM50AQ14320 339 aaKnown RBP22.12■■□□□ 1.13
TSFM-207ENST00000540550 EPRSP07814 1512 aaKnown RBP22.11■■□□□ 1.13
TSFM-207ENST00000540550 NCOA2Q15596 1464 aa22.09■■□□□ 1.13
TSFM-207ENST00000540550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.09■■□□□ 1.13
TSFM-207ENST00000540550 RAPGEF6Q8TEU7 1601 aa22.08■■□□□ 1.12
TSFM-207ENST00000540550 FGD6Q6ZV73 1430 aa22.08■■□□□ 1.12
TSFM-207ENST00000540550 CDK13Q14004 1512 aaKnown RBP22.06■■□□□ 1.12
TSFM-207ENST00000540550 MAGI3Q5TCQ9 1506 aa22.06■■□□□ 1.12
TSFM-207ENST00000540550 CARMIL2Q6F5E8 1435 aa22.05■■□□□ 1.12
TSFM-207ENST00000540550 DHX57Q6P158 1386 aaKnown RBP22.04■■□□□ 1.12
TSFM-207ENST00000540550 MYOM3Q5VTT5 1437 aa22.03■■□□□ 1.12
TSFM-207ENST00000540550 CLSPNQ9HAW4 1339 aa22.03■■□□□ 1.12
TSFM-207ENST00000540550 CHD1O14646 1710 aa22.02■■□□□ 1.12
TSFM-207ENST00000540550 ARHGEF11O15085 1522 aa22.02■■□□□ 1.12
TSFM-207ENST00000540550 SETD5Q9C0A6 1442 aa22■■□□□ 1.11
TSFM-207ENST00000540550 JPH4Q96JJ6 628 aa22■■□□□ 1.11
TSFM-207ENST00000540550 RAB3GAP2Q9H2M9 1393 aa21.99■■□□□ 1.11
TSFM-207ENST00000540550 NUP153P49790 1475 aaKnown RBP21.98■■□□□ 1.11
TSFM-207ENST00000540550 PTPN23Q9H3S7 1636 aa21.97■■□□□ 1.11
TSFM-207ENST00000540550 ARID3CA6NKF2 412 aa21.95■■□□□ 1.1
TSFM-207ENST00000540550 CDK11AQ9UQ88 783 aaPredicted RBP21.9■■□□□ 1.1
TSFM-207ENST00000540550 PLB1Q6P1J6 1458 aa21.9■■□□□ 1.1
TSFM-207ENST00000540550 TCOF1Q13428 1488 aaKnown RBP21.88■■□□□ 1.09
TSFM-207ENST00000540550 MIA2Q96PC5 1412 aa21.86■■□□□ 1.09
TSFM-207ENST00000540550 PRG4Q92954 1404 aaPredicted RBP21.85■■□□□ 1.09
TSFM-207ENST00000540550 ABCA8O94911 1581 aa21.85■■□□□ 1.09
TSFM-207ENST00000540550 SHROOM2Q13796 1616 aa21.82■■□□□ 1.08
TSFM-207ENST00000540550 TROQ12816 1431 aaPredicted RBP21.81■■□□□ 1.08
TSFM-207ENST00000540550 ADCY10Q96PN6 1610 aa21.81■■□□□ 1.08
TSFM-207ENST00000540550 HFM1A2PYH4 1435 aa21.8■■□□□ 1.08
TSFM-207ENST00000540550 PTPRKQ15262 1439 aa21.8■■□□□ 1.08
TSFM-207ENST00000540550 MAPKBP1O60336 1514 aa21.79■■□□□ 1.08
TSFM-207ENST00000540550 ITSN2Q9NZM3 1697 aa21.79■■□□□ 1.08
TSFM-207ENST00000540550 ZNF316A6NFI3 1004 aaPredicted RBP21.76■■□□□ 1.07
TSFM-207ENST00000540550 PTPRGP23470 1445 aa21.76■■□□□ 1.07
TSFM-207ENST00000540550 GCC2Q8IWJ2 1684 aa21.75■■□□□ 1.07
TSFM-207ENST00000540550 KIF14Q15058 1648 aa21.73■■□□□ 1.07
TSFM-207ENST00000540550 NAIPQ13075 1403 aa21.73■■□□□ 1.07
TSFM-207ENST00000540550 AKNAQ7Z591 1439 aa21.7■■□□□ 1.06
TSFM-207ENST00000540550 ATP10BO94823 1461 aa21.7■■□□□ 1.06
TSFM-207ENST00000540550 DNMT1P26358 1616 aaKnown RBP21.7■■□□□ 1.06
TSFM-207ENST00000540550 CLASP1Q7Z460 1538 aa21.7■■□□□ 1.06
TSFM-207ENST00000540550 PLEKHD1A6NEE1 506 aa21.68■■□□□ 1.06
TSFM-207ENST00000540550 DIEXFQ68CQ4 756 aaKnown RBP21.67■■□□□ 1.06
TSFM-207ENST00000540550 UACAQ9BZF9 1416 aa21.67■■□□□ 1.06
TSFM-207ENST00000540550 DAPK1P53355 1430 aa21.65■■□□□ 1.06
TSFM-207ENST00000540550 CHIC2Q9UKJ5 165 aa21.65■■□□□ 1.06
TSFM-207ENST00000540550 GPATCH8Q9UKJ3 1502 aaKnown RBP21.64■■□□□ 1.05
TSFM-207ENST00000540550 CAMSAP2Q08AD1 1489 aa21.64■■□□□ 1.05
TSFM-207ENST00000540550 RRP7BPQ9NSQ0 103 aa21.63■■□□□ 1.05
TSFM-207ENST00000540550 ERCC6L2Q5T890 1561 aa21.62■■□□□ 1.05
TSFM-207ENST00000540550 CDC42BPAQ5VT25 1732 aa21.62■■□□□ 1.05
TSFM-207ENST00000540550 CFDP1Q9UEE9 299 aaPredicted RBP21.62■■□□□ 1.05
TSFM-207ENST00000540550 ABCC5O15440 1437 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms