RNA–Protein interactions for RNA: ENST00000537328.5

TMEM258-204, Transcript of transmembrane protein 258, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM258, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-204ENST00000537328 GRIN2BQ13224 1484 aa25.31■■□□□ 1.64
TMEM258-204ENST00000537328 CUL7Q14999 1698 aa25.26■■□□□ 1.63
TMEM258-204ENST00000537328 VPS8Q8N3P4 1428 aa25.25■■□□□ 1.63
TMEM258-204ENST00000537328 ABCA5Q8WWZ7 1642 aa25.25■■□□□ 1.63
TMEM258-204ENST00000537328 GAPVD1Q14C86 1478 aa25.24■■□□□ 1.63
TMEM258-204ENST00000537328 SYNJ2O15056 1496 aa25.21■■□□□ 1.63
TMEM258-204ENST00000537328 CHMP7Q8WUX9 453 aaPredicted RBP25.2■■□□□ 1.62
TMEM258-204ENST00000537328 CLASP1Q7Z460 1538 aa25.2■■□□□ 1.62
TMEM258-204ENST00000537328 APLP2Q06481 763 aa25.17■■□□□ 1.62
TMEM258-204ENST00000537328 ARAP1Q96P48 1450 aa25.15■■□□□ 1.62
TMEM258-204ENST00000537328 CYB5RLQ6IPT4 315 aa25.1■■□□□ 1.61
TMEM258-204ENST00000537328 RANGAP1P46060 587 aaPredicted RBP25.08■■□□□ 1.61
TMEM258-204ENST00000537328 ADAMTS12P58397 1594 aa25.07■■□□□ 1.6
TMEM258-204ENST00000537328 HRCP23327 699 aa25.02■■□□□ 1.6
TMEM258-204ENST00000537328 PPARGC1BQ86YN6 1023 aaKnown RBP25.02■■□□□ 1.6
TMEM258-204ENST00000537328 ARHGAP35Q9NRY4 1499 aa25.02■■□□□ 1.6
TMEM258-204ENST00000537328 GRIN2AQ12879 1464 aa25■■□□□ 1.59
TMEM258-204ENST00000537328 FHAD1B1AJZ9 1412 aa24.98■■□□□ 1.59
TMEM258-204ENST00000537328 EFCAB5A4FU69 1503 aa24.96■■□□□ 1.59
TMEM258-204ENST00000537328 CTTNBP2Q8WZ74 1663 aa24.91■■□□□ 1.58
TMEM258-204ENST00000537328 CEP170Q5SW79 1584 aa24.91■■□□□ 1.58
TMEM258-204ENST00000537328 TRHP20396 242 aaPredicted RBP24.86■■□□□ 1.57
TMEM258-204ENST00000537328 NUP160Q12769 1436 aa24.86■■□□□ 1.57
TMEM258-204ENST00000537328 ZEB1P37275 1124 aaPredicted RBP24.84■■□□□ 1.57
TMEM258-204ENST00000537328 MAP3K1Q13233 1512 aa24.84■■□□□ 1.57
TMEM258-204ENST00000537328 SHROOM2Q13796 1616 aa24.8■■□□□ 1.56
TMEM258-204ENST00000537328 TTBK1Q5TCY1 1321 aaPredicted RBP24.78■■□□□ 1.56
TMEM258-204ENST00000537328 FMN1Q68DA7 1419 aa24.77■■□□□ 1.56
TMEM258-204ENST00000537328 ERCC6L2Q5T890 1561 aa24.76■■□□□ 1.55
TMEM258-204ENST00000537328 SAMD9Q5K651 1589 aa24.71■■□□□ 1.55
TMEM258-204ENST00000537328 FYCO1Q9BQS8 1478 aa24.7■■□□□ 1.54
TMEM258-204ENST00000537328 CASKIN1Q8WXD9 1431 aa24.69■■□□□ 1.54
TMEM258-204ENST00000537328 FHOD3Q2V2M9 1422 aa24.69■■□□□ 1.54
TMEM258-204ENST00000537328 P3H3Q8IVL6 736 aa24.68■■□□□ 1.54
TMEM258-204ENST00000537328 IQGAP2Q13576 1575 aa24.67■■□□□ 1.54
TMEM258-204ENST00000537328 TIAM1Q13009 1591 aa24.65■■□□□ 1.54
TMEM258-204ENST00000537328 KIAA0586Q9BVV6 1533 aa24.65■■□□□ 1.54
TMEM258-204ENST00000537328 KANK4Q5T7N3 995 aaPredicted RBP24.62■■□□□ 1.53
TMEM258-204ENST00000537328 PRG4Q92954 1404 aaPredicted RBP24.61■■□□□ 1.53
TMEM258-204ENST00000537328 UGGT2Q9NYU1 1516 aa24.6■■□□□ 1.53
TMEM258-204ENST00000537328 PCF11O94913 1555 aaKnown RBP24.59■■□□□ 1.53
TMEM258-204ENST00000537328 LRRC9Q6ZRR7 1453 aa24.57■■□□□ 1.52
TMEM258-204ENST00000537328 CFAP43Q8NDM7 1665 aa24.55■■□□□ 1.52
TMEM258-204ENST00000537328 ATP1B4Q9UN42 357 aaPredicted RBP24.54■■□□□ 1.52
TMEM258-204ENST00000537328 RRBP1Q9P2E9 1410 aaKnown RBP24.53■■□□□ 1.52
TMEM258-204ENST00000537328 JPH4Q96JJ6 628 aa24.52■■□□□ 1.52
TMEM258-204ENST00000537328 CCER1Q8TC90 406 aaPredicted RBP24.48■■□□□ 1.51
TMEM258-204ENST00000537328 CCDC18Q5T9S5 1454 aa24.45■■□□□ 1.51
TMEM258-204ENST00000537328 CCNB3Q8WWL7 1395 aa24.45■■□□□ 1.5
TMEM258-204ENST00000537328 HNRNPUL2Q1KMD3 747 aaKnown RBP24.43■■□□□ 1.5
TMEM258-204ENST00000537328 KIF13AQ9H1H9 1805 aa24.41■■□□□ 1.5
TMEM258-204ENST00000537328 CARMIL2Q6F5E8 1435 aa24.41■■□□□ 1.5
TMEM258-204ENST00000537328 HECW1Q76N89 1606 aa24.4■■□□□ 1.5
TMEM258-204ENST00000537328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.39■■□□□ 1.49
TMEM258-204ENST00000537328 MTUS2Q5JR59 1369 aa24.39■■□□□ 1.49
TMEM258-204ENST00000537328 KIAA0556O60303 1618 aa24.39■■□□□ 1.49
TMEM258-204ENST00000537328 ADCY10Q96PN6 1610 aa24.38■■□□□ 1.49
TMEM258-204ENST00000537328 DISP1Q96F81 1524 aa24.37■■□□□ 1.49
TMEM258-204ENST00000537328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.33■■□□□ 1.493e-7■□□□□ 11
TMEM258-204ENST00000537328 NPM1P06748 294 aaKnown RBP eCLIP24.33■■□□□ 1.49
TMEM258-204ENST00000537328 MAPKBP1O60336 1514 aa24.32■■□□□ 1.48
TMEM258-204ENST00000537328 EHBP1L1Q8N3D4 1523 aa24.31■■□□□ 1.48
TMEM258-204ENST00000537328 PHLDB1Q86UU1 1377 aa24.29■■□□□ 1.48
TMEM258-204ENST00000537328 EPRSP07814 1512 aaKnown RBP24.27■■□□□ 1.48
TMEM258-204ENST00000537328 DIP2BQ9P265 1576 aa24.25■■□□□ 1.47
TMEM258-204ENST00000537328 CDK11AQ9UQ88 783 aaPredicted RBP24.25■■□□□ 1.47
TMEM258-204ENST00000537328 PTPRGP23470 1445 aa24.23■■□□□ 1.47
TMEM258-204ENST00000537328 ABCC10Q5T3U5 1492 aa24.23■■□□□ 1.47
TMEM258-204ENST00000537328 SUPT6HQ7KZ85 1726 aaKnown RBP24.23■■□□□ 1.47
TMEM258-204ENST00000537328 RAPGEF6Q8TEU7 1601 aa24.21■■□□□ 1.47
TMEM258-204ENST00000537328 CLSPNQ9HAW4 1339 aa24.19■■□□□ 1.46
TMEM258-204ENST00000537328 NCOA2Q15596 1464 aa24.19■■□□□ 1.46
TMEM258-204ENST00000537328 LRRIQ1Q96JM4 1722 aa24.18■■□□□ 1.46
TMEM258-204ENST00000537328 FAM50AQ14320 339 aaKnown RBP24.18■■□□□ 1.46
TMEM258-204ENST00000537328 FGD6Q6ZV73 1430 aa24.18■■□□□ 1.46
TMEM258-204ENST00000537328 MYOM3Q5VTT5 1437 aa24.17■■□□□ 1.46
TMEM258-204ENST00000537328 FAM69CQ0P6D2 419 aa24.16■■□□□ 1.46
TMEM258-204ENST00000537328 TSPOAP1O95153 1857 aa24.14■■□□□ 1.45
TMEM258-204ENST00000537328 ABCC2Q92887 1545 aa24.14■■□□□ 1.45
TMEM258-204ENST00000537328 NUP153P49790 1475 aaKnown RBP24.13■■□□□ 1.45
TMEM258-204ENST00000537328 ITGAEP38570 1179 aa24.09■■□□□ 1.45
TMEM258-204ENST00000537328 CDK13Q14004 1512 aaKnown RBP24.09■■□□□ 1.45
TMEM258-204ENST00000537328 UHRF1BP1LA0JNW5 1464 aa24.08■■□□□ 1.45
TMEM258-204ENST00000537328 MIA2Q96PC5 1412 aa24.08■■□□□ 1.44
TMEM258-204ENST00000537328 MAGI3Q5TCQ9 1506 aa24.07■■□□□ 1.44
TMEM258-204ENST00000537328 UACAQ9BZF9 1416 aa24.07■■□□□ 1.44
TMEM258-204ENST00000537328 SETD5Q9C0A6 1442 aa24.07■■□□□ 1.44
TMEM258-204ENST00000537328 AEBP2Q6ZN18 517 aaPredicted RBP24.06■■□□□ 1.44
TMEM258-204ENST00000537328 KDM6BO15054 1643 aa24.06■■□□□ 1.44
TMEM258-204ENST00000537328 ABCA8O94911 1581 aa24.03■■□□□ 1.44
TMEM258-204ENST00000537328 PLB1Q6P1J6 1458 aa24.03■■□□□ 1.44
TMEM258-204ENST00000537328 ZCCHC11Q5TAX3 1644 aaKnown RBP24.02■■□□□ 1.44
TMEM258-204ENST00000537328 TROQ12816 1431 aaPredicted RBP24.01■■□□□ 1.43
TMEM258-204ENST00000537328 ASXL2Q76L83 1435 aa24.01■■□□□ 1.43
TMEM258-204ENST00000537328 TCOF1Q13428 1488 aaKnown RBP24.01■■□□□ 1.43
TMEM258-204ENST00000537328 DHX57Q6P158 1386 aaKnown RBP24■■□□□ 1.43
TMEM258-204ENST00000537328 PTPN23Q9H3S7 1636 aa23.99■■□□□ 1.43
TMEM258-204ENST00000537328 RAB3GAP2Q9H2M9 1393 aa23.98■■□□□ 1.43
TMEM258-204ENST00000537328 PLEKHD1A6NEE1 506 aa23.97■■□□□ 1.43
TMEM258-204ENST00000537328 GLI2P10070 1586 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms