RNA–Protein interactions for RNA: ENST00000537328.5

TMEM258-204, Transcript of transmembrane protein 258, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM258, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-204ENST00000537328 NISCHQ9Y2I1 1504 aa36.01■■■■□ 3.36
TMEM258-204ENST00000537328 CCDC180Q9P1Z9 1646 aa31.71■■■□□ 2.67
TMEM258-204ENST00000537328 ABCC9O60706 1549 aa31.41■■■□□ 2.62
TMEM258-204ENST00000537328 ZCCHC6Q5VYS8 1495 aaKnown RBP30.29■■■□□ 2.44
TMEM258-204ENST00000537328 RB1CC1Q8TDY2 1594 aa30.06■■■□□ 2.4
TMEM258-204ENST00000537328 DCAF1Q9Y4B6 1507 aa29.88■■■□□ 2.37
TMEM258-204ENST00000537328 NACADO15069 1562 aa29.85■■■□□ 2.37
TMEM258-204ENST00000537328 DCAF8L2P0C7V8 631 aa29.65■■■□□ 2.34
TMEM258-204ENST00000537328 MYO15BQ96JP2 1530 aa29.46■■■□□ 2.31
TMEM258-204ENST00000537328 UNC13AQ9UPW8 1703 aa29.42■■■□□ 2.3
TMEM258-204ENST00000537328 SHROOM4Q9ULL8 1493 aa29.42■■■□□ 2.3
TMEM258-204ENST00000537328 PABPN1Q86U42 306 aaKnown RBP eCLIP29.15■■■□□ 2.26
TMEM258-204ENST00000537328 DNAJC5BQ9UF47 199 aa29.08■■■□□ 2.25
TMEM258-204ENST00000537328 BICRAQ9NZM4 1560 aa29.07■■■□□ 2.24
TMEM258-204ENST00000537328 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
TMEM258-204ENST00000537328 SUPT5HO00267 1087 aaKnown RBP28.53■■■□□ 2.16
TMEM258-204ENST00000537328 CC2D2AQ9P2K1 1620 aa28.43■■■□□ 2.14
TMEM258-204ENST00000537328 EIF4G1Q04637 1599 aaKnown RBP28.41■■■□□ 2.14
TMEM258-204ENST00000537328 CECR2Q9BXF3 1484 aa28.28■■■□□ 2.12
TMEM258-204ENST00000537328 RSF1Q96T23 1441 aaPredicted RBP28.01■■■□□ 2.08
TMEM258-204ENST00000537328 BAZ1AQ9NRL2 1556 aaPredicted RBP27.83■■■□□ 2.05
TMEM258-204ENST00000537328 MROH2BQ7Z745 1585 aa27.74■■■□□ 2.03
TMEM258-204ENST00000537328 SMARCA4P51532 1647 aa27.59■■■□□ 2.01
TMEM258-204ENST00000537328 WIZO95785 1651 aa27.49■■□□□ 1.99
TMEM258-204ENST00000537328 CHIC1Q5VXU3 224 aa27.48■■□□□ 1.99
TMEM258-204ENST00000537328 SMARCA2P51531 1590 aa27.46■■□□□ 1.99
TMEM258-204ENST00000537328 NCAPD3P42695 1498 aa27.44■■□□□ 1.98
TMEM258-204ENST00000537328 ATAD2BQ9ULI0 1458 aa27.41■■□□□ 1.98
TMEM258-204ENST00000537328 HMGXB3Q12766 1538 aa27.39■■□□□ 1.98
TMEM258-204ENST00000537328 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
TMEM258-204ENST00000537328 PEG3Q9GZU2 1588 aa27.3■■□□□ 1.96
TMEM258-204ENST00000537328 BAZ1BQ9UIG0 1483 aaKnown RBP27.25■■□□□ 1.95
TMEM258-204ENST00000537328 ERCC6Q03468 1493 aa27.2■■□□□ 1.95
TMEM258-204ENST00000537328 CUX2O14529 1486 aa27.06■■□□□ 1.92
TMEM258-204ENST00000537328 CCDC88BA6NC98 1476 aa27.04■■□□□ 1.92
TMEM258-204ENST00000537328 NESP48681 1621 aa26.99■■□□□ 1.91
TMEM258-204ENST00000537328 LAMC3Q9Y6N6 1575 aa26.94■■□□□ 1.9
TMEM258-204ENST00000537328 TRIM41Q8WV44 630 aa26.92■■□□□ 1.9
TMEM258-204ENST00000537328 THOC2Q8NI27 1593 aaKnown RBP26.8■■□□□ 1.88
TMEM258-204ENST00000537328 KIF21AQ7Z4S6 1674 aa26.8■■□□□ 1.88
TMEM258-204ENST00000537328 PDS5BQ9NTI5 1447 aa26.72■■□□□ 1.87
TMEM258-204ENST00000537328 DNAJC5Q9H3Z4 198 aa26.67■■□□□ 1.86
TMEM258-204ENST00000537328 CADPSQ9ULU8 1353 aa26.62■■□□□ 1.85
TMEM258-204ENST00000537328 MRC2Q9UBG0 1479 aa26.51■■□□□ 1.83
TMEM258-204ENST00000537328 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
TMEM258-204ENST00000537328 WDR62O43379 1518 aa26.44■■□□□ 1.82
TMEM258-204ENST00000537328 ABCC8Q09428 1581 aa26.44■■□□□ 1.82
TMEM258-204ENST00000537328 WRNQ14191 1432 aaPredicted RBP eCLIP26.41■■□□□ 1.829e-6■■■■■ 50.1
TMEM258-204ENST00000537328 FANCD2Q9BXW9 1451 aa26.39■■□□□ 1.82
TMEM258-204ENST00000537328 PRDM2Q13029 1718 aa26.39■■□□□ 1.81
TMEM258-204ENST00000537328 CFTRP13569 1480 aa26.38■■□□□ 1.81
TMEM258-204ENST00000537328 LOC105371045A0A1W2PR82 267 aa26.35■■□□□ 1.81
TMEM258-204ENST00000537328 EEA1Q15075 1411 aa26.31■■□□□ 1.8
TMEM258-204ENST00000537328 FAM9AQ8IZU1 332 aaPredicted RBP26.29■■□□□ 1.8
TMEM258-204ENST00000537328 SYNJ1O43426 1573 aa26.16■■□□□ 1.78
TMEM258-204ENST00000537328 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.77
TMEM258-204ENST00000537328 TOP2BQ02880 1626 aa26.13■■□□□ 1.77
TMEM258-204ENST00000537328 BIVM-ERCC5R4GMW8 1640 aa26.08■■□□□ 1.77
TMEM258-204ENST00000537328 CSRNP3Q8WYN3 585 aa26.06■■□□□ 1.76
TMEM258-204ENST00000537328 SOGA1O94964 1423 aa26.05■■□□□ 1.76
TMEM258-204ENST00000537328 CUX1P39880 1505 aa25.94■■□□□ 1.74
TMEM258-204ENST00000537328 TOPBP1Q92547 1522 aa25.91■■□□□ 1.74
TMEM258-204ENST00000537328 IFT140Q96RY7 1462 aa25.89■■□□□ 1.73
TMEM258-204ENST00000537328 DNMBPQ6XZF7 1577 aa25.89■■□□□ 1.73
TMEM258-204ENST00000537328 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
TMEM258-204ENST00000537328 GOLGA3Q08378 1498 aa25.85■■□□□ 1.73
TMEM258-204ENST00000537328 TNIKQ9UKE5 1360 aa25.85■■□□□ 1.73
TMEM258-204ENST00000537328 EHMT2Q96KQ7 1210 aa25.8■■□□□ 1.72
TMEM258-204ENST00000537328 KIF21BO75037 1637 aa25.8■■□□□ 1.72
TMEM258-204ENST00000537328 KIF27Q86VH2 1401 aa25.79■■□□□ 1.72
TMEM258-204ENST00000537328 EIF4G3O43432 1585 aaKnown RBP25.78■■□□□ 1.72
TMEM258-204ENST00000537328 ZNF608Q9ULD9 1512 aaPredicted RBP25.76■■□□□ 1.71
TMEM258-204ENST00000537328 UBTFP17480 764 aaKnown RBP25.74■■□□□ 1.71
TMEM258-204ENST00000537328 OSCARQ8IYS5 282 aa25.72■■□□□ 1.71
TMEM258-204ENST00000537328 TARBP1Q13395 1621 aaKnown RBP25.68■■□□□ 1.7
TMEM258-204ENST00000537328 FGD5Q6ZNL6 1462 aa25.66■■□□□ 1.7
TMEM258-204ENST00000537328 POLA1P09884 1462 aaPredicted RBP25.65■■□□□ 1.7
TMEM258-204ENST00000537328 CEP162Q5TB80 1403 aa25.64■■□□□ 1.7
TMEM258-204ENST00000537328 ERICH3Q5RHP9 1530 aa25.63■■□□□ 1.69
TMEM258-204ENST00000537328 PRXQ9BXM0 1461 aa25.6■■□□□ 1.69
TMEM258-204ENST00000537328 CHD1O14646 1710 aa25.59■■□□□ 1.69
TMEM258-204ENST00000537328 TRIM26Q12899 539 aaPredicted RBP25.56■■□□□ 1.68
TMEM258-204ENST00000537328 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.681e-6■■■■□ 24.7
TMEM258-204ENST00000537328 WDR97A6NE52 1622 aa25.53■■□□□ 1.68
TMEM258-204ENST00000537328 RAPGEF2Q9Y4G8 1499 aa25.53■■□□□ 1.68
TMEM258-204ENST00000537328 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
TMEM258-204ENST00000537328 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
TMEM258-204ENST00000537328 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
TMEM258-204ENST00000537328 ABCA10Q8WWZ4 1543 aa25.5■■□□□ 1.67
TMEM258-204ENST00000537328 RAD54L2Q9Y4B4 1467 aa25.5■■□□□ 1.67
TMEM258-204ENST00000537328 PCGF6Q9BYE7 350 aa25.48■■□□□ 1.67
TMEM258-204ENST00000537328 IGF1RP08069 1367 aa25.46■■□□□ 1.67
TMEM258-204ENST00000537328 CLIP1P30622 1438 aa25.43■■□□□ 1.66
TMEM258-204ENST00000537328 ARHGEF11O15085 1522 aa25.42■■□□□ 1.66
TMEM258-204ENST00000537328 TDRD9Q8NDG6 1382 aaKnown RBP25.39■■□□□ 1.65
TMEM258-204ENST00000537328 CARMIL1Q5VZK9 1371 aa25.38■■□□□ 1.65
TMEM258-204ENST00000537328 SNAPC4Q5SXM2 1469 aa25.38■■□□□ 1.65
TMEM258-204ENST00000537328 PBRM1Q86U86 1689 aa25.37■■□□□ 1.65
TMEM258-204ENST00000537328 FBLN2P98095 1184 aa25.37■■□□□ 1.65
TMEM258-204ENST00000537328 MAGI1Q96QZ7 1491 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms