RNA–Protein interactions for RNA: ENST00000534610.5

ATG13-222, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 1,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-222ENST00000534610 SYNJ2O15056 1496 aa24.34■■□□□ 1.49
ATG13-222ENST00000534610 CARMIL1Q5VZK9 1371 aa24.34■■□□□ 1.49
ATG13-222ENST00000534610 ADAMTS12P58397 1594 aa24.26■■□□□ 1.47
ATG13-222ENST00000534610 CHMP7Q8WUX9 453 aaPredicted RBP24.26■■□□□ 1.47
ATG13-222ENST00000534610 ARAP1Q96P48 1450 aa24.25■■□□□ 1.47
ATG13-222ENST00000534610 CUL7Q14999 1698 aa24.21■■□□□ 1.47
ATG13-222ENST00000534610 CLIP1P30622 1438 aa24.19■■□□□ 1.46
ATG13-222ENST00000534610 GRIN2AQ12879 1464 aa24.17■■□□□ 1.46
ATG13-222ENST00000534610 CEP170Q5SW79 1584 aa24.15■■□□□ 1.46
ATG13-222ENST00000534610 CYB5RLQ6IPT4 315 aa24.12■■□□□ 1.45
ATG13-222ENST00000534610 RANGAP1P46060 587 aaPredicted RBP24.11■■□□□ 1.45
ATG13-222ENST00000534610 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
ATG13-222ENST00000534610 NUP160Q12769 1436 aa24.1■■□□□ 1.45
ATG13-222ENST00000534610 ERCC6L2Q5T890 1561 aa24.07■■□□□ 1.44
ATG13-222ENST00000534610 SHROOM2Q13796 1616 aa24.01■■□□□ 1.43
ATG13-222ENST00000534610 VPS8Q8N3P4 1428 aa23.96■■□□□ 1.43
ATG13-222ENST00000534610 TRIM26Q12899 539 aaPredicted RBP23.94■■□□□ 1.42
ATG13-222ENST00000534610 APLP2Q06481 763 aa23.92■■□□□ 1.42
ATG13-222ENST00000534610 ARHGAP35Q9NRY4 1499 aa23.89■■□□□ 1.42
ATG13-222ENST00000534610 CTTNBP2Q8WZ74 1663 aa23.89■■□□□ 1.41
ATG13-222ENST00000534610 PCGF6Q9BYE7 350 aa23.88■■□□□ 1.41
ATG13-222ENST00000534610 PPARGC1BQ86YN6 1023 aaKnown RBP23.83■■□□□ 1.4
ATG13-222ENST00000534610 EFCAB5A4FU69 1503 aa23.81■■□□□ 1.4
ATG13-222ENST00000534610 PRG4Q92954 1404 aaPredicted RBP23.78■■□□□ 1.4
ATG13-222ENST00000534610 P3H3Q8IVL6 736 aa23.75■■□□□ 1.39
ATG13-222ENST00000534610 JPH4Q96JJ6 628 aa23.75■■□□□ 1.39
ATG13-222ENST00000534610 KIAA0586Q9BVV6 1533 aa23.73■■□□□ 1.39
ATG13-222ENST00000534610 IQGAP2Q13576 1575 aa23.71■■□□□ 1.39
ATG13-222ENST00000534610 FHOD3Q2V2M9 1422 aa23.67■■□□□ 1.38
ATG13-222ENST00000534610 TRHP20396 242 aaPredicted RBP23.67■■□□□ 1.38
ATG13-222ENST00000534610 FMN1Q68DA7 1419 aa23.66■■□□□ 1.38
ATG13-222ENST00000534610 TTBK1Q5TCY1 1321 aaPredicted RBP23.65■■□□□ 1.38
ATG13-222ENST00000534610 SAMD9Q5K651 1589 aa23.65■■□□□ 1.38
ATG13-222ENST00000534610 UGGT2Q9NYU1 1516 aa23.6■■□□□ 1.37
ATG13-222ENST00000534610 ATP1B4Q9UN42 357 aaPredicted RBP23.59■■□□□ 1.37
ATG13-222ENST00000534610 ADCY10Q96PN6 1610 aa23.58■■□□□ 1.37
ATG13-222ENST00000534610 CASKIN1Q8WXD9 1431 aa23.56■■□□□ 1.36
ATG13-222ENST00000534610 MAP3K1Q13233 1512 aa23.55■■□□□ 1.36
ATG13-222ENST00000534610 FYCO1Q9BQS8 1478 aa23.55■■□□□ 1.36
ATG13-222ENST00000534610 KIF13AQ9H1H9 1805 aa23.54■■□□□ 1.36
ATG13-222ENST00000534610 DISP1Q96F81 1524 aa23.5■■□□□ 1.35
ATG13-222ENST00000534610 PCF11O94913 1555 aaKnown RBP23.5■■□□□ 1.35
ATG13-222ENST00000534610 CARMIL2Q6F5E8 1435 aa23.48■■□□□ 1.35
ATG13-222ENST00000534610 KANK4Q5T7N3 995 aaPredicted RBP23.48■■□□□ 1.35
ATG13-222ENST00000534610 TIAM1Q13009 1591 aa23.47■■□□□ 1.35
ATG13-222ENST00000534610 KIAA0556O60303 1618 aa23.44■■□□□ 1.34
ATG13-222ENST00000534610 MAPKBP1O60336 1514 aa23.41■■□□□ 1.34
ATG13-222ENST00000534610 PTPRGP23470 1445 aa23.4■■□□□ 1.34
ATG13-222ENST00000534610 LRRC9Q6ZRR7 1453 aa23.39■■□□□ 1.34
ATG13-222ENST00000534610 CFAP43Q8NDM7 1665 aa23.37■■□□□ 1.33
ATG13-222ENST00000534610 DIP2BQ9P265 1576 aa23.36■■□□□ 1.33
ATG13-222ENST00000534610 CCDC18Q5T9S5 1454 aa23.35■■□□□ 1.33
ATG13-222ENST00000534610 HECW1Q76N89 1606 aa23.34■■□□□ 1.33
ATG13-222ENST00000534610 ABCC10Q5T3U5 1492 aa23.34■■□□□ 1.33
ATG13-222ENST00000534610 MTUS2Q5JR59 1369 aa23.31■■□□□ 1.32
ATG13-222ENST00000534610 ABCC2Q92887 1545 aa23.3■■□□□ 1.32
ATG13-222ENST00000534610 UHRF1BP1LA0JNW5 1464 aa23.29■■□□□ 1.32
ATG13-222ENST00000534610 UACAQ9BZF9 1416 aa23.27■■□□□ 1.31
ATG13-222ENST00000534610 EPRSP07814 1512 aaKnown RBP23.25■■□□□ 1.31
ATG13-222ENST00000534610 NPM1P06748 294 aaKnown RBP eCLIP23.25■■□□□ 1.31
ATG13-222ENST00000534610 RAPGEF6Q8TEU7 1601 aa23.24■■□□□ 1.31
ATG13-222ENST00000534610 CDK11AQ9UQ88 783 aaPredicted RBP23.23■■□□□ 1.31
ATG13-222ENST00000534610 RRBP1Q9P2E9 1410 aaKnown RBP23.22■■□□□ 1.31
ATG13-222ENST00000534610 FAM69CQ0P6D2 419 aa23.22■■□□□ 1.31
ATG13-222ENST00000534610 ZCCHC11Q5TAX3 1644 aaKnown RBP23.21■■□□□ 1.31
ATG13-222ENST00000534610 KDM5BQ9UGL1 1544 aa23.21■■□□□ 1.31
ATG13-222ENST00000534610 TSPOAP1O95153 1857 aa23.21■■□□□ 1.31
ATG13-222ENST00000534610 PLB1Q6P1J6 1458 aa23.21■■□□□ 1.31
ATG13-222ENST00000534610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.2■■□□□ 1.3
ATG13-222ENST00000534610 HNRNPUL2Q1KMD3 747 aaKnown RBP23.2■■□□□ 1.3
ATG13-222ENST00000534610 CCNB3Q8WWL7 1395 aa23.2■■□□□ 1.3
ATG13-222ENST00000534610 EHBP1L1Q8N3D4 1523 aa23.19■■□□□ 1.3
ATG13-222ENST00000534610 ASXL2Q76L83 1435 aa23.19■■□□□ 1.3
ATG13-222ENST00000534610 LRRIQ1Q96JM4 1722 aa23.19■■□□□ 1.3
ATG13-222ENST00000534610 ABCA8O94911 1581 aa23.18■■□□□ 1.3
ATG13-222ENST00000534610 HRCP23327 699 aa23.17■■□□□ 1.3
ATG13-222ENST00000534610 NUP153P49790 1475 aaKnown RBP23.17■■□□□ 1.3
ATG13-222ENST00000534610 PPRC1Q5VV67 1664 aaKnown RBP23.16■■□□□ 1.3
ATG13-222ENST00000534610 ARID3CA6NKF2 412 aa23.16■■□□□ 1.3
ATG13-222ENST00000534610 PHLDB1Q86UU1 1377 aa23.15■■□□□ 1.3
ATG13-222ENST00000534610 CDK13Q14004 1512 aaKnown RBP23.14■■□□□ 1.29
ATG13-222ENST00000534610 SUPT6HQ7KZ85 1726 aaKnown RBP23.12■■□□□ 1.29
ATG13-222ENST00000534610 GLI2P10070 1586 aa23.11■■□□□ 1.29
ATG13-222ENST00000534610 NCOA2Q15596 1464 aa23.1■■□□□ 1.29
ATG13-222ENST00000534610 FAM50AQ14320 339 aaKnown RBP23.07■■□□□ 1.28
ATG13-222ENST00000534610 ZEB1P37275 1124 aaPredicted RBP23.06■■□□□ 1.28
ATG13-222ENST00000534610 MAGI3Q5TCQ9 1506 aa23.06■■□□□ 1.28
ATG13-222ENST00000534610 MAP3K4Q9Y6R4 1608 aa23.05■■□□□ 1.28
ATG13-222ENST00000534610 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.05■■□□□ 1.28
ATG13-222ENST00000534610 PLEKHD1A6NEE1 506 aa23.04■■□□□ 1.28
ATG13-222ENST00000534610 MYOM3Q5VTT5 1437 aa23.03■■□□□ 1.28
ATG13-222ENST00000534610 FGD6Q6ZV73 1430 aa23.02■■□□□ 1.28
ATG13-222ENST00000534610 CCER1Q8TC90 406 aaPredicted RBP23.02■■□□□ 1.28
ATG13-222ENST00000534610 KDM6BO15054 1643 aa23.01■■□□□ 1.27
ATG13-222ENST00000534610 WDR7Q9Y4E6 1490 aa23.01■■□□□ 1.27
ATG13-222ENST00000534610 TROQ12816 1431 aaPredicted RBP23.01■■□□□ 1.27
ATG13-222ENST00000534610 ITGAEP38570 1179 aa23■■□□□ 1.27
ATG13-222ENST00000534610 ATP10BO94823 1461 aa23■■□□□ 1.27
ATG13-222ENST00000534610 MIA2Q96PC5 1412 aa22.94■■□□□ 1.26
ATG13-222ENST00000534610 COL17A1Q9UMD9 1497 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms