RNA–Protein interactions for RNA: ENST00000534610.5

ATG13-222, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 1,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-222ENST00000534610 NISCHQ9Y2I1 1504 aa34.56■■■■□ 3.12
ATG13-222ENST00000534610 CCDC180Q9P1Z9 1646 aa30.63■■■□□ 2.49
ATG13-222ENST00000534610 ABCC9O60706 1549 aa30.28■■■□□ 2.44
ATG13-222ENST00000534610 ZCCHC6Q5VYS8 1495 aaKnown RBP29■■■□□ 2.23
ATG13-222ENST00000534610 RB1CC1Q8TDY2 1594 aa28.92■■■□□ 2.22
ATG13-222ENST00000534610 NACADO15069 1562 aa28.81■■■□□ 2.2
ATG13-222ENST00000534610 DCAF8L2P0C7V8 631 aa28.7■■■□□ 2.19
ATG13-222ENST00000534610 DCAF1Q9Y4B6 1507 aa28.6■■■□□ 2.17
ATG13-222ENST00000534610 MYO15BQ96JP2 1530 aa28.52■■■□□ 2.16
ATG13-222ENST00000534610 UNC13AQ9UPW8 1703 aa28.49■■■□□ 2.15
ATG13-222ENST00000534610 BICRAQ9NZM4 1560 aa28.23■■■□□ 2.11
ATG13-222ENST00000534610 PABPN1Q86U42 306 aaKnown RBP eCLIP28.21■■■□□ 2.11
ATG13-222ENST00000534610 SHROOM4Q9ULL8 1493 aa28.19■■■□□ 2.1
ATG13-222ENST00000534610 DNAJC5BQ9UF47 199 aa28.17■■■□□ 2.1
ATG13-222ENST00000534610 SCRIBQ14160 1630 aa27.96■■■□□ 2.07
ATG13-222ENST00000534610 EIF4G1Q04637 1599 aaKnown RBP27.42■■□□□ 1.98
ATG13-222ENST00000534610 CC2D2AQ9P2K1 1620 aa27.4■■□□□ 1.98
ATG13-222ENST00000534610 SUPT5HO00267 1087 aaKnown RBP27.21■■□□□ 1.95
ATG13-222ENST00000534610 CECR2Q9BXF3 1484 aa27.2■■□□□ 1.94
ATG13-222ENST00000534610 RSF1Q96T23 1441 aaPredicted RBP26.81■■□□□ 1.88
ATG13-222ENST00000534610 BAZ1AQ9NRL2 1556 aaPredicted RBP26.72■■□□□ 1.87
ATG13-222ENST00000534610 SMARCA4P51532 1647 aa26.7■■□□□ 1.87
ATG13-222ENST00000534610 MROH2BQ7Z745 1585 aa26.66■■□□□ 1.86
ATG13-222ENST00000534610 NCAPD3P42695 1498 aa26.6■■□□□ 1.85
ATG13-222ENST00000534610 ATAD2BQ9ULI0 1458 aa26.6■■□□□ 1.85
ATG13-222ENST00000534610 SMARCA2P51531 1590 aa26.49■■□□□ 1.83
ATG13-222ENST00000534610 HMGXB3Q12766 1538 aa26.46■■□□□ 1.83
ATG13-222ENST00000534610 PEG3Q9GZU2 1588 aa26.44■■□□□ 1.82
ATG13-222ENST00000534610 WIZO95785 1651 aa26.42■■□□□ 1.82
ATG13-222ENST00000534610 BAZ1BQ9UIG0 1483 aaKnown RBP26.31■■□□□ 1.8
ATG13-222ENST00000534610 TOP2AP11388 1531 aaKnown RBP26.21■■□□□ 1.79
ATG13-222ENST00000534610 NESP48681 1621 aa26.18■■□□□ 1.78
ATG13-222ENST00000534610 ERCC6Q03468 1493 aa26.01■■□□□ 1.75
ATG13-222ENST00000534610 CHIC1Q5VXU3 224 aa26■■□□□ 1.75
ATG13-222ENST00000534610 CCDC88BA6NC98 1476 aa25.95■■□□□ 1.74
ATG13-222ENST00000534610 LAMC3Q9Y6N6 1575 aa25.95■■□□□ 1.74
ATG13-222ENST00000534610 CUX2O14529 1486 aa25.89■■□□□ 1.73
ATG13-222ENST00000534610 KIF21AQ7Z4S6 1674 aa25.88■■□□□ 1.73
ATG13-222ENST00000534610 THOC2Q8NI27 1593 aaKnown RBP25.86■■□□□ 1.73
ATG13-222ENST00000534610 CADPSQ9ULU8 1353 aa25.78■■□□□ 1.72
ATG13-222ENST00000534610 PDS5BQ9NTI5 1447 aa25.7■■□□□ 1.7
ATG13-222ENST00000534610 TRIM41Q8WV44 630 aa25.64■■□□□ 1.69
ATG13-222ENST00000534610 CFTRP13569 1480 aa25.6■■□□□ 1.69
ATG13-222ENST00000534610 MRC2Q9UBG0 1479 aa25.54■■□□□ 1.68
ATG13-222ENST00000534610 FANCD2Q9BXW9 1451 aa25.52■■□□□ 1.68
ATG13-222ENST00000534610 WDR62O43379 1518 aa25.51■■□□□ 1.67
ATG13-222ENST00000534610 CEP164Q9UPV0 1460 aa25.49■■□□□ 1.67
ATG13-222ENST00000534610 PRDM2Q13029 1718 aa25.48■■□□□ 1.67
ATG13-222ENST00000534610 DNAJC5Q9H3Z4 198 aa25.47■■□□□ 1.67
ATG13-222ENST00000534610 URB2Q14146 1524 aaKnown RBP25.36■■□□□ 1.65
ATG13-222ENST00000534610 ABCC8Q09428 1581 aa25.34■■□□□ 1.65
ATG13-222ENST00000534610 WRNQ14191 1432 aaPredicted RBP eCLIP25.28■■□□□ 1.64
ATG13-222ENST00000534610 TOPBP1Q92547 1522 aa25.11■■□□□ 1.61
ATG13-222ENST00000534610 FAM9AQ8IZU1 332 aaPredicted RBP25.1■■□□□ 1.61
ATG13-222ENST00000534610 SYNJ1O43426 1573 aa25.07■■□□□ 1.6
ATG13-222ENST00000534610 DNMBPQ6XZF7 1577 aa25.04■■□□□ 1.6
ATG13-222ENST00000534610 TOP2BQ02880 1626 aa25.02■■□□□ 1.6
ATG13-222ENST00000534610 ZNF608Q9ULD9 1512 aaPredicted RBP25■■□□□ 1.59
ATG13-222ENST00000534610 LOC105371045A0A1W2PR82 267 aa24.99■■□□□ 1.59
ATG13-222ENST00000534610 EEA1Q15075 1411 aa24.97■■□□□ 1.59
ATG13-222ENST00000534610 BIVM-ERCC5R4GMW8 1640 aa24.97■■□□□ 1.59
ATG13-222ENST00000534610 IFT140Q96RY7 1462 aa24.95■■□□□ 1.58
ATG13-222ENST00000534610 CUX1P39880 1505 aa24.93■■□□□ 1.58
ATG13-222ENST00000534610 TARBP1Q13395 1621 aaKnown RBP24.92■■□□□ 1.58
ATG13-222ENST00000534610 SOGA1O94964 1423 aa24.91■■□□□ 1.58
ATG13-222ENST00000534610 POLA1P09884 1462 aaPredicted RBP24.88■■□□□ 1.57
ATG13-222ENST00000534610 EIF4G3O43432 1585 aaKnown RBP24.88■■□□□ 1.57
ATG13-222ENST00000534610 CSRNP3Q8WYN3 585 aa24.85■■□□□ 1.57
ATG13-222ENST00000534610 RAD54L2Q9Y4B4 1467 aa24.8■■□□□ 1.56
ATG13-222ENST00000534610 RUSC2Q8N2Y8 1516 aa24.77■■□□□ 1.56
ATG13-222ENST00000534610 FGD5Q6ZNL6 1462 aa24.77■■□□□ 1.56
ATG13-222ENST00000534610 AQRO60306 1485 aaKnown RBP eCLIP24.76■■□□□ 1.557e-6■□□□□ 9.9
ATG13-222ENST00000534610 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
ATG13-222ENST00000534610 KIF27Q86VH2 1401 aa24.68■■□□□ 1.54
ATG13-222ENST00000534610 WDR97A6NE52 1622 aa24.68■■□□□ 1.54
ATG13-222ENST00000534610 OSCARQ8IYS5 282 aa24.68■■□□□ 1.54
ATG13-222ENST00000534610 CHD1O14646 1710 aa24.67■■□□□ 1.54
ATG13-222ENST00000534610 TDRD9Q8NDG6 1382 aaKnown RBP24.63■■□□□ 1.53
ATG13-222ENST00000534610 GOLGA3Q08378 1498 aa24.58■■□□□ 1.53
ATG13-222ENST00000534610 UBTFP17480 764 aaKnown RBP24.56■■□□□ 1.52
ATG13-222ENST00000534610 KIF21BO75037 1637 aa24.54■■□□□ 1.52
ATG13-222ENST00000534610 TNIKQ9UKE5 1360 aa24.52■■□□□ 1.52
ATG13-222ENST00000534610 SNAPC4Q5SXM2 1469 aa24.52■■□□□ 1.52
ATG13-222ENST00000534610 RIMBP3CA6NJZ7 1639 aa24.51■■□□□ 1.51
ATG13-222ENST00000534610 RIMBP3BA6NNM3 1639 aa24.51■■□□□ 1.51
ATG13-222ENST00000534610 RIMBP3Q9UFD9 1639 aa24.51■■□□□ 1.51
ATG13-222ENST00000534610 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
ATG13-222ENST00000534610 ABCA10Q8WWZ4 1543 aa24.5■■□□□ 1.51
ATG13-222ENST00000534610 ABCA5Q8WWZ7 1642 aa24.49■■□□□ 1.51
ATG13-222ENST00000534610 GRIN2BQ13224 1484 aa24.44■■□□□ 1.5
ATG13-222ENST00000534610 PRXQ9BXM0 1461 aa24.44■■□□□ 1.5
ATG13-222ENST00000534610 ARHGEF11O15085 1522 aa24.43■■□□□ 1.5
ATG13-222ENST00000534610 IGF1RP08069 1367 aa24.43■■□□□ 1.5
ATG13-222ENST00000534610 GAPVD1Q14C86 1478 aa24.42■■□□□ 1.5
ATG13-222ENST00000534610 MAGI1Q96QZ7 1491 aaPredicted RBP24.42■■□□□ 1.5
ATG13-222ENST00000534610 ERICH3Q5RHP9 1530 aa24.41■■□□□ 1.5
ATG13-222ENST00000534610 RAPGEF2Q9Y4G8 1499 aa24.4■■□□□ 1.5
ATG13-222ENST00000534610 FBLN2P98095 1184 aa24.39■■□□□ 1.49
ATG13-222ENST00000534610 CLASP1Q7Z460 1538 aa24.36■■□□□ 1.49
ATG13-222ENST00000534610 CEP162Q5TB80 1403 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms