RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 FHAD1B1AJZ9 1412 aa23.9■■□□□ 1.42
CCDC90B-213ENST00000529611 ADAMTS12P58397 1594 aa23.89■■□□□ 1.42
CCDC90B-213ENST00000529611 HRCP23327 699 aa23.89■■□□□ 1.42
CCDC90B-213ENST00000529611 APLP2Q06481 763 aa23.88■■□□□ 1.41
CCDC90B-213ENST00000529611 EIF4G3O43432 1585 aaKnown RBP23.86■■□□□ 1.41
CCDC90B-213ENST00000529611 EFCAB5A4FU69 1503 aa23.83■■□□□ 1.41
CCDC90B-213ENST00000529611 SNAPC4Q5SXM2 1469 aa23.77■■□□□ 1.4
CCDC90B-213ENST00000529611 FHOD3Q2V2M9 1422 aa23.75■■□□□ 1.39
CCDC90B-213ENST00000529611 P3H3Q8IVL6 736 aa23.74■■□□□ 1.39
CCDC90B-213ENST00000529611 SAMD9Q5K651 1589 aa23.73■■□□□ 1.39
CCDC90B-213ENST00000529611 KANK4Q5T7N3 995 aaPredicted RBP23.7■■□□□ 1.38
CCDC90B-213ENST00000529611 MAGI1Q96QZ7 1491 aaPredicted RBP23.69■■□□□ 1.38
CCDC90B-213ENST00000529611 PCF11O94913 1555 aaKnown RBP23.68■■□□□ 1.38
CCDC90B-213ENST00000529611 IQGAP2Q13576 1575 aa23.67■■□□□ 1.38
CCDC90B-213ENST00000529611 MAP3K1Q13233 1512 aa23.67■■□□□ 1.38
CCDC90B-213ENST00000529611 GRIN2AQ12879 1464 aa23.66■■□□□ 1.38
CCDC90B-213ENST00000529611 TIAM1Q13009 1591 aa23.65■■□□□ 1.38
CCDC90B-213ENST00000529611 FMN1Q68DA7 1419 aa23.62■■□□□ 1.37
CCDC90B-213ENST00000529611 FYCO1Q9BQS8 1478 aa23.62■■□□□ 1.37
CCDC90B-213ENST00000529611 SYNJ2O15056 1496 aa23.62■■□□□ 1.37
CCDC90B-213ENST00000529611 CASKIN1Q8WXD9 1431 aa23.61■■□□□ 1.37
CCDC90B-213ENST00000529611 KIAA0586Q9BVV6 1533 aa23.58■■□□□ 1.37
CCDC90B-213ENST00000529611 CFAP43Q8NDM7 1665 aa23.58■■□□□ 1.36
CCDC90B-213ENST00000529611 UGGT2Q9NYU1 1516 aa23.56■■□□□ 1.36
CCDC90B-213ENST00000529611 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
CCDC90B-213ENST00000529611 LRRC9Q6ZRR7 1453 aa23.54■■□□□ 1.36
CCDC90B-213ENST00000529611 CEP170Q5SW79 1584 aa23.51■■□□□ 1.35
CCDC90B-213ENST00000529611 ATP1B4Q9UN42 357 aaPredicted RBP23.51■■□□□ 1.35
CCDC90B-213ENST00000529611 RRBP1Q9P2E9 1410 aaKnown RBP23.48■■□□□ 1.35
CCDC90B-213ENST00000529611 FBLN2P98095 1184 aa23.47■■□□□ 1.35
CCDC90B-213ENST00000529611 NUP160Q12769 1436 aa23.47■■□□□ 1.35
CCDC90B-213ENST00000529611 DISP1Q96F81 1524 aa23.45■■□□□ 1.34
CCDC90B-213ENST00000529611 KIAA0556O60303 1618 aa23.44■■□□□ 1.34
CCDC90B-213ENST00000529611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.43■■□□□ 1.34
CCDC90B-213ENST00000529611 ZEB1P37275 1124 aaPredicted RBP23.43■■□□□ 1.34
CCDC90B-213ENST00000529611 HNRNPUL2Q1KMD3 747 aaKnown RBP23.43■■□□□ 1.34
CCDC90B-213ENST00000529611 LRRIQ1Q96JM4 1722 aa23.43■■□□□ 1.34
CCDC90B-213ENST00000529611 CCNB3Q8WWL7 1395 aa23.38■■□□□ 1.33
CCDC90B-213ENST00000529611 PHLDB1Q86UU1 1377 aa23.36■■□□□ 1.33
CCDC90B-213ENST00000529611 HECW1Q76N89 1606 aa23.36■■□□□ 1.33
CCDC90B-213ENST00000529611 CCER1Q8TC90 406 aaPredicted RBP23.35■■□□□ 1.33
CCDC90B-213ENST00000529611 CCDC18Q5T9S5 1454 aa23.33■■□□□ 1.32
CCDC90B-213ENST00000529611 MTUS2Q5JR59 1369 aa23.3■■□□□ 1.32
CCDC90B-213ENST00000529611 JPH4Q96JJ6 628 aa23.3■■□□□ 1.32
CCDC90B-213ENST00000529611 CHD1O14646 1710 aa23.3■■□□□ 1.32
CCDC90B-213ENST00000529611 EPRSP07814 1512 aaKnown RBP23.28■■□□□ 1.32
CCDC90B-213ENST00000529611 EHBP1L1Q8N3D4 1523 aa23.26■■□□□ 1.31
CCDC90B-213ENST00000529611 CARMIL2Q6F5E8 1435 aa23.26■■□□□ 1.31
CCDC90B-213ENST00000529611 MAGI3Q5TCQ9 1506 aa23.25■■□□□ 1.31
CCDC90B-213ENST00000529611 CDK13Q14004 1512 aaKnown RBP23.23■■□□□ 1.31
CCDC90B-213ENST00000529611 RAPGEF6Q8TEU7 1601 aa23.23■■□□□ 1.31
CCDC90B-213ENST00000529611 SUPT6HQ7KZ85 1726 aaKnown RBP23.2■■□□□ 1.31
CCDC90B-213ENST00000529611 NUP153P49790 1475 aaKnown RBP23.2■■□□□ 1.3
CCDC90B-213ENST00000529611 NCOA2Q15596 1464 aa23.2■■□□□ 1.3
CCDC90B-213ENST00000529611 ARHGEF11O15085 1522 aa23.17■■□□□ 1.3
CCDC90B-213ENST00000529611 FGD6Q6ZV73 1430 aa23.16■■□□□ 1.3
CCDC90B-213ENST00000529611 PLB1Q6P1J6 1458 aa23.15■■□□□ 1.3
CCDC90B-213ENST00000529611 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.15■■□□□ 1.3
CCDC90B-213ENST00000529611 ARID3CA6NKF2 412 aa23.14■■□□□ 1.3
CCDC90B-213ENST00000529611 ITGAEP38570 1179 aa23.14■■□□□ 1.3
CCDC90B-213ENST00000529611 FAM50AQ14320 339 aaKnown RBP23.14■■□□□ 1.3
CCDC90B-213ENST00000529611 PRG4Q92954 1404 aaPredicted RBP23.13■■□□□ 1.29
CCDC90B-213ENST00000529611 MYOM3Q5VTT5 1437 aa23.12■■□□□ 1.29
CCDC90B-213ENST00000529611 SHROOM2Q13796 1616 aa23.11■■□□□ 1.29
CCDC90B-213ENST00000529611 ABCA8O94911 1581 aa23.08■■□□□ 1.28
CCDC90B-213ENST00000529611 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
CCDC90B-213ENST00000529611 CDK11AQ9UQ88 783 aaPredicted RBP23.01■■□□□ 1.27
CCDC90B-213ENST00000529611 PTPRGP23470 1445 aa23.01■■□□□ 1.27
CCDC90B-213ENST00000529611 PTPN23Q9H3S7 1636 aa23.01■■□□□ 1.27
CCDC90B-213ENST00000529611 DHX57Q6P158 1386 aaKnown RBP23■■□□□ 1.27
CCDC90B-213ENST00000529611 RAB3GAP2Q9H2M9 1393 aa22.99■■□□□ 1.27
CCDC90B-213ENST00000529611 TROQ12816 1431 aaPredicted RBP22.98■■□□□ 1.27
CCDC90B-213ENST00000529611 SETD5Q9C0A6 1442 aa22.98■■□□□ 1.27
CCDC90B-213ENST00000529611 TCOF1Q13428 1488 aaKnown RBP22.97■■□□□ 1.27
CCDC90B-213ENST00000529611 ERCC6L2Q5T890 1561 aa22.96■■□□□ 1.27
CCDC90B-213ENST00000529611 MIA2Q96PC5 1412 aa22.96■■□□□ 1.27
CCDC90B-213ENST00000529611 ATP10BO94823 1461 aa22.95■■□□□ 1.26
CCDC90B-213ENST00000529611 PTPRKQ15262 1439 aa22.94■■□□□ 1.26
CCDC90B-213ENST00000529611 CLSPNQ9HAW4 1339 aa22.92■■□□□ 1.26
CCDC90B-213ENST00000529611 ADCY10Q96PN6 1610 aa22.92■■□□□ 1.26
CCDC90B-213ENST00000529611 UACAQ9BZF9 1416 aa22.89■■□□□ 1.25
CCDC90B-213ENST00000529611 KIF14Q15058 1648 aa22.88■■□□□ 1.25
CCDC90B-213ENST00000529611 PLEKHD1A6NEE1 506 aa22.85■■□□□ 1.25
CCDC90B-213ENST00000529611 HFM1A2PYH4 1435 aa22.84■■□□□ 1.25
CCDC90B-213ENST00000529611 ITSN2Q9NZM3 1697 aa22.82■■□□□ 1.24
CCDC90B-213ENST00000529611 ABCC2Q92887 1545 aa22.81■■□□□ 1.24
CCDC90B-213ENST00000529611 GPATCH8Q9UKJ3 1502 aaKnown RBP22.81■■□□□ 1.24
CCDC90B-213ENST00000529611 NAIPQ13075 1403 aa22.79■■□□□ 1.24
CCDC90B-213ENST00000529611 ABCC10Q5T3U5 1492 aa22.78■■□□□ 1.24
CCDC90B-213ENST00000529611 MAPKBP1O60336 1514 aa22.77■■□□□ 1.24
CCDC90B-213ENST00000529611 ZNF644Q9H582 1327 aaPredicted RBP22.76■■□□□ 1.23
CCDC90B-213ENST00000529611 DNMT1P26358 1616 aaKnown RBP22.75■■□□□ 1.23
CCDC90B-213ENST00000529611 AKNAQ7Z591 1439 aa22.75■■□□□ 1.23
CCDC90B-213ENST00000529611 CFDP1Q9UEE9 299 aaPredicted RBP22.74■■□□□ 1.23
CCDC90B-213ENST00000529611 DAPK1P53355 1430 aa22.74■■□□□ 1.23
CCDC90B-213ENST00000529611 CAMSAP2Q08AD1 1489 aa22.73■■□□□ 1.23
CCDC90B-213ENST00000529611 CDC42BPAQ5VT25 1732 aa22.73■■□□□ 1.23
CCDC90B-213ENST00000529611 CHIC2Q9UKJ5 165 aa22.72■■□□□ 1.23
CCDC90B-213ENST00000529611 UHRF1BP1LA0JNW5 1464 aa22.72■■□□□ 1.23
CCDC90B-213ENST00000529611 ABCC5O15440 1437 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms