RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 NISCHQ9Y2I1 1504 aa34.56■■■■□ 3.12
CCDC90B-213ENST00000529611 CCDC180Q9P1Z9 1646 aa29.99■■■□□ 2.39
CCDC90B-213ENST00000529611 ZCCHC6Q5VYS8 1495 aaKnown RBP29.08■■■□□ 2.25
CCDC90B-213ENST00000529611 DCAF1Q9Y4B6 1507 aa28.55■■■□□ 2.16
CCDC90B-213ENST00000529611 DCAF8L2P0C7V8 631 aa28.49■■■□□ 2.15
CCDC90B-213ENST00000529611 SHROOM4Q9ULL8 1493 aa28.4■■■□□ 2.14
CCDC90B-213ENST00000529611 ABCC9O60706 1549 aa28.23■■■□□ 2.11
CCDC90B-213ENST00000529611 MYO15BQ96JP2 1530 aa28.12■■■□□ 2.09
CCDC90B-213ENST00000529611 NACADO15069 1562 aa27.89■■■□□ 2.05
CCDC90B-213ENST00000529611 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
CCDC90B-213ENST00000529611 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
CCDC90B-213ENST00000529611 SUPT5HO00267 1087 aaKnown RBP27.42■■□□□ 1.98
CCDC90B-213ENST00000529611 UNC13AQ9UPW8 1703 aa27.09■■□□□ 1.93
CCDC90B-213ENST00000529611 RSF1Q96T23 1441 aaPredicted RBP26.92■■□□□ 1.9
CCDC90B-213ENST00000529611 CECR2Q9BXF3 1484 aa26.88■■□□□ 1.89
CCDC90B-213ENST00000529611 BICRAQ9NZM4 1560 aa26.81■■□□□ 1.88
CCDC90B-213ENST00000529611 MROH2BQ7Z745 1585 aa26.74■■□□□ 1.87
CCDC90B-213ENST00000529611 PABPN1Q86U42 306 aaKnown RBP eCLIP26.68■■□□□ 1.86
CCDC90B-213ENST00000529611 BAZ1AQ9NRL2 1556 aaPredicted RBP26.65■■□□□ 1.86
CCDC90B-213ENST00000529611 WIZO95785 1651 aa26.53■■□□□ 1.84
CCDC90B-213ENST00000529611 SMARCA4P51532 1647 aa26.52■■□□□ 1.84
CCDC90B-213ENST00000529611 CHIC1Q5VXU3 224 aa26.36■■□□□ 1.81
CCDC90B-213ENST00000529611 TOP2AP11388 1531 aaKnown RBP26.23■■□□□ 1.79
CCDC90B-213ENST00000529611 PEG3Q9GZU2 1588 aa26.18■■□□□ 1.78
CCDC90B-213ENST00000529611 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
CCDC90B-213ENST00000529611 SMARCA2P51531 1590 aa26■■□□□ 1.75
CCDC90B-213ENST00000529611 CCDC88BA6NC98 1476 aa25.99■■□□□ 1.75
CCDC90B-213ENST00000529611 EIF4G1Q04637 1599 aaKnown RBP25.97■■□□□ 1.75
CCDC90B-213ENST00000529611 BAZ1BQ9UIG0 1483 aaKnown RBP25.89■■□□□ 1.73
CCDC90B-213ENST00000529611 NCAPD3P42695 1498 aa25.76■■□□□ 1.71
CCDC90B-213ENST00000529611 HMGXB3Q12766 1538 aa25.73■■□□□ 1.71
CCDC90B-213ENST00000529611 TRIM41Q8WV44 630 aa25.73■■□□□ 1.71
CCDC90B-213ENST00000529611 ABCC8Q09428 1581 aa25.53■■□□□ 1.68
CCDC90B-213ENST00000529611 CC2D2AQ9P2K1 1620 aa25.53■■□□□ 1.68
CCDC90B-213ENST00000529611 LOC105371045A0A1W2PR82 267 aa25.38■■□□□ 1.65
CCDC90B-213ENST00000529611 WRNQ14191 1432 aaPredicted RBP eCLIP25.32■■□□□ 1.64
CCDC90B-213ENST00000529611 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
CCDC90B-213ENST00000529611 CFTRP13569 1480 aa25.26■■□□□ 1.63
CCDC90B-213ENST00000529611 SYNJ1O43426 1573 aa25.22■■□□□ 1.63
CCDC90B-213ENST00000529611 CADPSQ9ULU8 1353 aa25.12■■□□□ 1.61
CCDC90B-213ENST00000529611 PRDM2Q13029 1718 aa25.11■■□□□ 1.61
CCDC90B-213ENST00000529611 SOGA1O94964 1423 aa25.1■■□□□ 1.61
CCDC90B-213ENST00000529611 TOP2BQ02880 1626 aa25.08■■□□□ 1.61
CCDC90B-213ENST00000529611 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
CCDC90B-213ENST00000529611 EEA1Q15075 1411 aa25.03■■□□□ 1.6
CCDC90B-213ENST00000529611 RUSC2Q8N2Y8 1516 aa25.01■■□□□ 1.59
CCDC90B-213ENST00000529611 CUX1P39880 1505 aa24.98■■□□□ 1.59
CCDC90B-213ENST00000529611 EHMT2Q96KQ7 1210 aa24.96■■□□□ 1.59
CCDC90B-213ENST00000529611 DNAJC5BQ9UF47 199 aa24.91■■□□□ 1.58
CCDC90B-213ENST00000529611 CSRNP3Q8WYN3 585 aa24.9■■□□□ 1.58
CCDC90B-213ENST00000529611 NESP48681 1621 aa24.87■■□□□ 1.57
CCDC90B-213ENST00000529611 FANCD2Q9BXW9 1451 aa24.85■■□□□ 1.57
CCDC90B-213ENST00000529611 LAMC3Q9Y6N6 1575 aa24.83■■□□□ 1.57
CCDC90B-213ENST00000529611 GOLGA3Q08378 1498 aa24.72■■□□□ 1.55
CCDC90B-213ENST00000529611 KIF21BO75037 1637 aa24.71■■□□□ 1.55
CCDC90B-213ENST00000529611 CEP164Q9UPV0 1460 aa24.7■■□□□ 1.55
CCDC90B-213ENST00000529611 TNIKQ9UKE5 1360 aa24.69■■□□□ 1.54
CCDC90B-213ENST00000529611 FGD5Q6ZNL6 1462 aa24.66■■□□□ 1.54
CCDC90B-213ENST00000529611 DNMBPQ6XZF7 1577 aa24.66■■□□□ 1.54
CCDC90B-213ENST00000529611 KIF27Q86VH2 1401 aa24.64■■□□□ 1.53
CCDC90B-213ENST00000529611 PDS5BQ9NTI5 1447 aa24.64■■□□□ 1.53
CCDC90B-213ENST00000529611 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
CCDC90B-213ENST00000529611 UBTFP17480 764 aaKnown RBP24.6■■□□□ 1.53
CCDC90B-213ENST00000529611 CEP162Q5TB80 1403 aa24.59■■□□□ 1.53
CCDC90B-213ENST00000529611 RAPGEF2Q9Y4G8 1499 aa24.58■■□□□ 1.52
CCDC90B-213ENST00000529611 PRXQ9BXM0 1461 aa24.55■■□□□ 1.52
CCDC90B-213ENST00000529611 URB2Q14146 1524 aaKnown RBP24.55■■□□□ 1.52
CCDC90B-213ENST00000529611 KIF21AQ7Z4S6 1674 aa24.55■■□□□ 1.52
CCDC90B-213ENST00000529611 CUX2O14529 1486 aa24.54■■□□□ 1.52
CCDC90B-213ENST00000529611 POLA1P09884 1462 aaPredicted RBP24.52■■□□□ 1.52
CCDC90B-213ENST00000529611 ERICH3Q5RHP9 1530 aa24.51■■□□□ 1.51
CCDC90B-213ENST00000529611 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.51
CCDC90B-213ENST00000529611 ABCA10Q8WWZ4 1543 aa24.44■■□□□ 1.5
CCDC90B-213ENST00000529611 PCGF6Q9BYE7 350 aa24.43■■□□□ 1.5
CCDC90B-213ENST00000529611 IGF1RP08069 1367 aa24.42■■□□□ 1.5
CCDC90B-213ENST00000529611 TRIM26Q12899 539 aaPredicted RBP24.34■■□□□ 1.49
CCDC90B-213ENST00000529611 CLIP1P30622 1438 aa24.34■■□□□ 1.49
CCDC90B-213ENST00000529611 WDR97A6NE52 1622 aa24.34■■□□□ 1.49
CCDC90B-213ENST00000529611 MRC2Q9UBG0 1479 aa24.31■■□□□ 1.48
CCDC90B-213ENST00000529611 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
CCDC90B-213ENST00000529611 TARBP1Q13395 1621 aaKnown RBP24.23■■□□□ 1.47
CCDC90B-213ENST00000529611 ABCA5Q8WWZ7 1642 aa24.23■■□□□ 1.47
CCDC90B-213ENST00000529611 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
CCDC90B-213ENST00000529611 WDR62O43379 1518 aa24.19■■□□□ 1.46
CCDC90B-213ENST00000529611 PPARGC1BQ86YN6 1023 aaKnown RBP24.18■■□□□ 1.46
CCDC90B-213ENST00000529611 CUL7Q14999 1698 aa24.18■■□□□ 1.46
CCDC90B-213ENST00000529611 RANGAP1P46060 587 aaPredicted RBP24.18■■□□□ 1.46
CCDC90B-213ENST00000529611 VPS8Q8N3P4 1428 aa24.16■■□□□ 1.46
CCDC90B-213ENST00000529611 GAPVD1Q14C86 1478 aa24.16■■□□□ 1.46
CCDC90B-213ENST00000529611 ERCC6Q03468 1493 aa24.15■■□□□ 1.46
CCDC90B-213ENST00000529611 ARAP1Q96P48 1450 aa24.1■■□□□ 1.45
CCDC90B-213ENST00000529611 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.44
CCDC90B-213ENST00000529611 IFT140Q96RY7 1462 aa24.05■■□□□ 1.44
CCDC90B-213ENST00000529611 ARHGAP35Q9NRY4 1499 aa24.05■■□□□ 1.44
CCDC90B-213ENST00000529611 AQRO60306 1485 aaKnown RBP eCLIP24■■□□□ 1.43
CCDC90B-213ENST00000529611 PBRM1Q86U86 1689 aa24■■□□□ 1.43
CCDC90B-213ENST00000529611 ZNF608Q9ULD9 1512 aaPredicted RBP23.96■■□□□ 1.43
CCDC90B-213ENST00000529611 TTBK1Q5TCY1 1321 aaPredicted RBP23.95■■□□□ 1.42
CCDC90B-213ENST00000529611 CTTNBP2Q8WZ74 1663 aa23.95■■□□□ 1.42
CCDC90B-213ENST00000529611 GRIN2BQ13224 1484 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms