RNA–Protein interactions for RNA: ENST00000528900.5

RDX-206, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 1,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-206ENST00000528900 EIF4G3O43432 1585 aaKnown RBP43.25■■■■■ 4.51
RDX-206ENST00000528900 PPARGC1BQ86YN6 1023 aaKnown RBP43.2■■■■■ 4.51
RDX-206ENST00000528900 EFCAB5A4FU69 1503 aa43.15■■■■■ 4.5
RDX-206ENST00000528900 APLP2Q06481 763 aa43.11■■■■■ 4.49
RDX-206ENST00000528900 SNAPC4Q5SXM2 1469 aa43.05■■■■■ 4.48
RDX-206ENST00000528900 MAGI1Q96QZ7 1491 aaPredicted RBP43.03■■■■■ 4.48
RDX-206ENST00000528900 SAMD9Q5K651 1589 aa42.9■■■■■ 4.46
RDX-206ENST00000528900 GRIN2AQ12879 1464 aa42.86■■■■■ 4.45
RDX-206ENST00000528900 IQGAP2Q13576 1575 aa42.86■■■■■ 4.45
RDX-206ENST00000528900 SYNJ2O15056 1496 aa42.85■■■■■ 4.45
RDX-206ENST00000528900 FHOD3Q2V2M9 1422 aa42.81■■■■■ 4.44
RDX-206ENST00000528900 TTBK1Q5TCY1 1321 aaPredicted RBP42.81■■■■■ 4.44
RDX-206ENST00000528900 MAP3K1Q13233 1512 aa42.79■■■■■ 4.44
RDX-206ENST00000528900 P3H3Q8IVL6 736 aa42.76■■■■■ 4.44
RDX-206ENST00000528900 KIAA0586Q9BVV6 1533 aa42.74■■■■■ 4.43
RDX-206ENST00000528900 FMN1Q68DA7 1419 aa42.74■■■■■ 4.43
RDX-206ENST00000528900 CHMP7Q8WUX9 453 aaPredicted RBP42.7■■■■■ 4.43
RDX-206ENST00000528900 PCF11O94913 1555 aaKnown RBP42.69■■■■■ 4.42
RDX-206ENST00000528900 FYCO1Q9BQS8 1478 aa42.68■■■■■ 4.42
RDX-206ENST00000528900 UGGT2Q9NYU1 1516 aa42.67■■■■■ 4.42
RDX-206ENST00000528900 CASKIN1Q8WXD9 1431 aa42.67■■■■■ 4.42
RDX-206ENST00000528900 TIAM1Q13009 1591 aa42.64■■■■■ 4.42
RDX-206ENST00000528900 KANK4Q5T7N3 995 aaPredicted RBP42.57■■■■■ 4.41
RDX-206ENST00000528900 HRCP23327 699 aa42.57■■■■■ 4.4
RDX-206ENST00000528900 CEP170Q5SW79 1584 aa42.56■■■■■ 4.4
RDX-206ENST00000528900 CFAP43Q8NDM7 1665 aa42.55■■■■■ 4.4
RDX-206ENST00000528900 NUP160Q12769 1436 aa42.55■■■■■ 4.4
RDX-206ENST00000528900 FBLN2P98095 1184 aa42.49■■■■■ 4.39
RDX-206ENST00000528900 LRRC9Q6ZRR7 1453 aa42.44■■■■■ 4.38
RDX-206ENST00000528900 KIAA0556O60303 1618 aa42.41■■■■■ 4.38
RDX-206ENST00000528900 DISP1Q96F81 1524 aa42.39■■■■■ 4.38
RDX-206ENST00000528900 ATP1B4Q9UN42 357 aaPredicted RBP42.37■■■■■ 4.37
RDX-206ENST00000528900 CHD1O14646 1710 aa42.27■■■■■ 4.36
RDX-206ENST00000528900 RRBP1Q9P2E9 1410 aaKnown RBP42.27■■■■■ 4.36
RDX-206ENST00000528900 HECW1Q76N89 1606 aa42.26■■■■■ 4.36
RDX-206ENST00000528900 CCDC18Q5T9S5 1454 aa42.23■■■■■ 4.35
RDX-206ENST00000528900 LRRIQ1Q96JM4 1722 aa42.23■■■■■ 4.35
RDX-206ENST00000528900 CARMIL2Q6F5E8 1435 aa42.22■■■■■ 4.35
RDX-206ENST00000528900 JPH4Q96JJ6 628 aa42.22■■■■■ 4.35
RDX-206ENST00000528900 CCNB3Q8WWL7 1395 aa42.1■■■■■ 4.33
RDX-206ENST00000528900 ZEB1P37275 1124 aaPredicted RBP42.09■■■■■ 4.33
RDX-206ENST00000528900 MTUS2Q5JR59 1369 aa42.07■■■■■ 4.33
RDX-206ENST00000528900 EPRSP07814 1512 aaKnown RBP42.06■■■■■ 4.32
RDX-206ENST00000528900 RAPGEF6Q8TEU7 1601 aa42.04■■■■■ 4.32
RDX-206ENST00000528900 EHBP1L1Q8N3D4 1523 aa42.04■■■■■ 4.32
RDX-206ENST00000528900 PHLDB1Q86UU1 1377 aa42.02■■■■■ 4.32
RDX-206ENST00000528900 HNRNPUL2Q1KMD3 747 aaKnown RBP42.02■■■■■ 4.32
RDX-206ENST00000528900 SHROOM2Q13796 1616 aa41.94■■■■■ 4.31
RDX-206ENST00000528900 SUPT6HQ7KZ85 1726 aaKnown RBP41.94■■■■■ 4.3
RDX-206ENST00000528900 PRG4Q92954 1404 aaPredicted RBP41.91■■■■■ 4.3
RDX-206ENST00000528900 NUP153P49790 1475 aaKnown RBP41.91■■■■■ 4.3
RDX-206ENST00000528900 CDK13Q14004 1512 aaKnown RBP41.88■■■■■ 4.29
RDX-206ENST00000528900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.87■■■■■ 4.29
RDX-206ENST00000528900 MAGI3Q5TCQ9 1506 aa41.86■■■■■ 4.29
RDX-206ENST00000528900 NCOA2Q15596 1464 aa41.85■■■■■ 4.29
RDX-206ENST00000528900 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP41.83■■■■■ 4.29
RDX-206ENST00000528900 CCER1Q8TC90 406 aaPredicted RBP41.83■■■■■ 4.29
RDX-206ENST00000528900 ARHGEF11O15085 1522 aa41.81■■■■■ 4.28
RDX-206ENST00000528900 CLASP1Q7Z460 1538 aa41.81■■■■■ 4.28
RDX-206ENST00000528900 PLB1Q6P1J6 1458 aa41.81■■■■■ 4.28
RDX-206ENST00000528900 ABCA8O94911 1581 aa41.79■■■■■ 4.28
RDX-206ENST00000528900 FGD6Q6ZV73 1430 aa41.75■■■■■ 4.27
RDX-206ENST00000528900 CDK11AQ9UQ88 783 aaPredicted RBP41.74■■■■■ 4.27
RDX-206ENST00000528900 MYOM3Q5VTT5 1437 aa41.73■■■■■ 4.27
RDX-206ENST00000528900 PTPRGP23470 1445 aa41.72■■■■■ 4.27
RDX-206ENST00000528900 FAM50AQ14320 339 aaKnown RBP41.65■■■■■ 4.26
RDX-206ENST00000528900 ARID3CA6NKF2 412 aa41.64■■■■■ 4.26
RDX-206ENST00000528900 TROQ12816 1431 aaPredicted RBP41.57■■■■■ 4.24
RDX-206ENST00000528900 ITGAEP38570 1179 aa41.55■■■■■ 4.24
RDX-206ENST00000528900 MIA2Q96PC5 1412 aa41.52■■■■■ 4.24
RDX-206ENST00000528900 ERCC6L2Q5T890 1561 aa41.51■■■■■ 4.24
RDX-206ENST00000528900 PTPN23Q9H3S7 1636 aa41.51■■■■■ 4.24
RDX-206ENST00000528900 ATP10BO94823 1461 aa41.5■■■■■ 4.23
RDX-206ENST00000528900 UACAQ9BZF9 1416 aa41.49■■■■■ 4.23
RDX-206ENST00000528900 ADCY10Q96PN6 1610 aa41.48■■■■■ 4.23
RDX-206ENST00000528900 TCOF1Q13428 1488 aaKnown RBP41.48■■■■■ 4.23
RDX-206ENST00000528900 PLEKHD1A6NEE1 506 aa41.39■■■■■ 4.22
RDX-206ENST00000528900 SETD5Q9C0A6 1442 aa41.38■■■■■ 4.21
RDX-206ENST00000528900 ABCC2Q92887 1545 aa41.37■■■■■ 4.21
RDX-206ENST00000528900 ITSN2Q9NZM3 1697 aa41.31■■■■■ 4.2
RDX-206ENST00000528900 RAB3GAP2Q9H2M9 1393 aa41.31■■■■■ 4.2
RDX-206ENST00000528900 CLSPNQ9HAW4 1339 aa41.3■■■■■ 4.2
RDX-206ENST00000528900 KIF14Q15058 1648 aa41.29■■■■■ 4.2
RDX-206ENST00000528900 UHRF1BP1LA0JNW5 1464 aa41.28■■■■■ 4.2
RDX-206ENST00000528900 OSCARQ8IYS5 282 aa41.28■■■■■ 4.2
RDX-206ENST00000528900 DHX57Q6P158 1386 aaKnown RBP41.27■■■■■ 4.2
RDX-206ENST00000528900 PTPRKQ15262 1439 aa41.22■■■■■ 4.19
RDX-206ENST00000528900 GPATCH8Q9UKJ3 1502 aaKnown RBP41.2■■■■■ 4.19
RDX-206ENST00000528900 ABCC10Q5T3U5 1492 aa41.17■■■■■ 4.18
RDX-206ENST00000528900 HFM1A2PYH4 1435 aa41.17■■■■■ 4.18
RDX-206ENST00000528900 CFDP1Q9UEE9 299 aaPredicted RBP41.1■■■■■ 4.17
RDX-206ENST00000528900 AKNAQ7Z591 1439 aa41.09■■■■■ 4.17
RDX-206ENST00000528900 KDM5BQ9UGL1 1544 aa41.09■■■■■ 4.17
RDX-206ENST00000528900 CDC42BPAQ5VT25 1732 aa41.08■■■■■ 4.17
RDX-206ENST00000528900 DNMT1P26358 1616 aaKnown RBP41.08■■■■■ 4.17
RDX-206ENST00000528900 ZCCHC11Q5TAX3 1644 aaKnown RBP41.05■■■■■ 4.16
RDX-206ENST00000528900 CAMSAP2Q08AD1 1489 aa41.04■■■■■ 4.16
RDX-206ENST00000528900 NAIPQ13075 1403 aa41.04■■■■■ 4.16
RDX-206ENST00000528900 DAPK1P53355 1430 aa41.02■■■■■ 4.16
RDX-206ENST00000528900 GCC2Q8IWJ2 1684 aa40.99■■■■■ 4.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms