RNA–Protein interactions for RNA: ENST00000528643.5

FDFT1-212, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-212ENST00000528643 CARMIL1Q5VZK9 1371 aa13.06□□□□□ -0.32
FDFT1-212ENST00000528643 TARBP1Q13395 1621 aaKnown RBP13.06□□□□□ -0.32
FDFT1-212ENST00000528643 MRC2Q9UBG0 1479 aa13.06□□□□□ -0.32
FDFT1-212ENST00000528643 CUL7Q14999 1698 aa13.05□□□□□ -0.32
FDFT1-212ENST00000528643 PPARGC1BQ86YN6 1023 aaKnown RBP13.05□□□□□ -0.32
FDFT1-212ENST00000528643 VPS8Q8N3P4 1428 aa13.04□□□□□ -0.32
FDFT1-212ENST00000528643 ARAP1Q96P48 1450 aa13.01□□□□□ -0.33
FDFT1-212ENST00000528643 MAPK8IP2Q13387 824 aaPredicted RBP13.01□□□□□ -0.33
FDFT1-212ENST00000528643 WDR62O43379 1518 aa13.01□□□□□ -0.33
FDFT1-212ENST00000528643 RANGAP1P46060 587 aaPredicted RBP13□□□□□ -0.33
FDFT1-212ENST00000528643 TDRD9Q8NDG6 1382 aaKnown RBP13□□□□□ -0.33
FDFT1-212ENST00000528643 GAPVD1Q14C86 1478 aa12.99□□□□□ -0.33
FDFT1-212ENST00000528643 ARHGAP35Q9NRY4 1499 aa12.97□□□□□ -0.33
FDFT1-212ENST00000528643 PBRM1Q86U86 1689 aa12.97□□□□□ -0.33
FDFT1-212ENST00000528643 CTTNBP2Q8WZ74 1663 aa12.97□□□□□ -0.33
FDFT1-212ENST00000528643 THOC2Q8NI27 1593 aaKnown RBP12.96□□□□□ -0.33
FDFT1-212ENST00000528643 HRCP23327 699 aa12.96□□□□□ -0.33
FDFT1-212ENST00000528643 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.33
FDFT1-212ENST00000528643 ERCC6Q03468 1493 aa12.94□□□□□ -0.34
FDFT1-212ENST00000528643 IFT140Q96RY7 1462 aa12.92□□□□□ -0.34
FDFT1-212ENST00000528643 TTBK1Q5TCY1 1321 aaPredicted RBP12.91□□□□□ -0.34
FDFT1-212ENST00000528643 SLC4A2P04920 1241 aa12.9□□□□□ -0.35
FDFT1-212ENST00000528643 AQRO60306 1485 aaKnown RBP eCLIP12.89□□□□□ -0.352e-8■■■■□ 25.7
FDFT1-212ENST00000528643 ATXN8OSP0DMR3 200 aa12.89□□□□□ -0.35
FDFT1-212ENST00000528643 ADAMTS12P58397 1594 aa12.88□□□□□ -0.35
FDFT1-212ENST00000528643 ZNF608Q9ULD9 1512 aaPredicted RBP12.88□□□□□ -0.35
FDFT1-212ENST00000528643 GRIN2BQ13224 1484 aa12.86□□□□□ -0.35
FDFT1-212ENST00000528643 EFCAB5A4FU69 1503 aa12.86□□□□□ -0.35
FDFT1-212ENST00000528643 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
FDFT1-212ENST00000528643 FHAD1B1AJZ9 1412 aa12.84□□□□□ -0.35
FDFT1-212ENST00000528643 APLP2Q06481 763 aa12.84□□□□□ -0.35
FDFT1-212ENST00000528643 SAMD9Q5K651 1589 aa12.81□□□□□ -0.36
FDFT1-212ENST00000528643 PCF11O94913 1555 aaKnown RBP12.8□□□□□ -0.36
FDFT1-212ENST00000528643 FHOD3Q2V2M9 1422 aa12.79□□□□□ -0.36
FDFT1-212ENST00000528643 PLCB2Q00722 1185 aa12.79□□□□□ -0.36
FDFT1-212ENST00000528643 TIAM1Q13009 1591 aa12.78□□□□□ -0.36
FDFT1-212ENST00000528643 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
FDFT1-212ENST00000528643 MYCNP04198 464 aaPredicted RBP12.78□□□□□ -0.36
FDFT1-212ENST00000528643 CFAP43Q8NDM7 1665 aa12.78□□□□□ -0.36
FDFT1-212ENST00000528643 MAP3K1Q13233 1512 aa12.78□□□□□ -0.36
FDFT1-212ENST00000528643 KANK4Q5T7N3 995 aaPredicted RBP12.77□□□□□ -0.37
FDFT1-212ENST00000528643 P3H3Q8IVL6 736 aa12.76□□□□□ -0.37
FDFT1-212ENST00000528643 IQGAP2Q13576 1575 aa12.76□□□□□ -0.37
FDFT1-212ENST00000528643 PRKCSHP14314 528 aaPredicted RBP12.75□□□□□ -0.37
FDFT1-212ENST00000528643 FYCO1Q9BQS8 1478 aa12.74□□□□□ -0.37
FDFT1-212ENST00000528643 MAGI1Q96QZ7 1491 aaPredicted RBP12.74□□□□□ -0.37
FDFT1-212ENST00000528643 CASKIN1Q8WXD9 1431 aa12.72□□□□□ -0.37
FDFT1-212ENST00000528643 GRIN2AQ12879 1464 aa12.72□□□□□ -0.37
FDFT1-212ENST00000528643 FMN1Q68DA7 1419 aa12.72□□□□□ -0.37
FDFT1-212ENST00000528643 LRRIQ1Q96JM4 1722 aa12.71□□□□□ -0.37
FDFT1-212ENST00000528643 LRRC9Q6ZRR7 1453 aa12.7□□□□□ -0.38
FDFT1-212ENST00000528643 UGGT2Q9NYU1 1516 aa12.69□□□□□ -0.38
FDFT1-212ENST00000528643 SYNJ2O15056 1496 aa12.69□□□□□ -0.38
FDFT1-212ENST00000528643 RRBP1Q9P2E9 1410 aaKnown RBP12.68□□□□□ -0.38
FDFT1-212ENST00000528643 KIAA0586Q9BVV6 1533 aa12.68□□□□□ -0.38
FDFT1-212ENST00000528643 ZEB1P37275 1124 aaPredicted RBP12.67□□□□□ -0.38
FDFT1-212ENST00000528643 HAP1P54257 671 aaPredicted RBP12.67□□□□□ -0.38
FDFT1-212ENST00000528643 CEP170Q5SW79 1584 aa12.67□□□□□ -0.38
FDFT1-212ENST00000528643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
FDFT1-212ENST00000528643 KIAA0556O60303 1618 aa12.64□□□□□ -0.39
FDFT1-212ENST00000528643 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
FDFT1-212ENST00000528643 BCANQ96GW7 911 aa12.64□□□□□ -0.39
FDFT1-212ENST00000528643 DISP1Q96F81 1524 aa12.63□□□□□ -0.39
FDFT1-212ENST00000528643 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
FDFT1-212ENST00000528643 MSH5O43196 834 aa12.62□□□□□ -0.39
FDFT1-212ENST00000528643 ATP1B4Q9UN42 357 aaPredicted RBP12.62□□□□□ -0.39
FDFT1-212ENST00000528643 NUP160Q12769 1436 aa12.62□□□□□ -0.39
FDFT1-212ENST00000528643 CHMP7Q8WUX9 453 aaPredicted RBP12.61□□□□□ -0.39
FDFT1-212ENST00000528643 CCNB3Q8WWL7 1395 aa12.61□□□□□ -0.39
FDFT1-212ENST00000528643 CCER1Q8TC90 406 aaPredicted RBP12.6□□□□□ -0.39
FDFT1-212ENST00000528643 PHLDB1Q86UU1 1377 aa12.6□□□□□ -0.39
FDFT1-212ENST00000528643 HECW1Q76N89 1606 aa12.6□□□□□ -0.39
FDFT1-212ENST00000528643 CHD1O14646 1710 aa12.58□□□□□ -0.4
FDFT1-212ENST00000528643 FBLN2P98095 1184 aa12.57□□□□□ -0.4
FDFT1-212ENST00000528643 TAOK2Q9UL54 1235 aa12.57□□□□□ -0.4
FDFT1-212ENST00000528643 CCDC18Q5T9S5 1454 aa12.57□□□□□ -0.4
FDFT1-212ENST00000528643 MAGI3Q5TCQ9 1506 aa12.55□□□□□ -0.4
FDFT1-212ENST00000528643 EHBP1L1Q8N3D4 1523 aa12.55□□□□□ -0.4
FDFT1-212ENST00000528643 EPRSP07814 1512 aaKnown RBP12.55□□□□□ -0.4
FDFT1-212ENST00000528643 SUPT6HQ7KZ85 1726 aaKnown RBP12.55□□□□□ -0.4
FDFT1-212ENST00000528643 MTUS2Q5JR59 1369 aa12.54□□□□□ -0.4
FDFT1-212ENST00000528643 RAPGEF6Q8TEU7 1601 aa12.53□□□□□ -0.4
FDFT1-212ENST00000528643 CDK13Q14004 1512 aaKnown RBP12.53□□□□□ -0.4
FDFT1-212ENST00000528643 NCOA2Q15596 1464 aa12.51□□□□□ -0.41
FDFT1-212ENST00000528643 ARHGEF11O15085 1522 aa12.51□□□□□ -0.41
FDFT1-212ENST00000528643 NUP153P49790 1475 aaKnown RBP12.5□□□□□ -0.41
FDFT1-212ENST00000528643 FGD6Q6ZV73 1430 aa12.49□□□□□ -0.41
FDFT1-212ENST00000528643 JPH4Q96JJ6 628 aa12.49□□□□□ -0.41
FDFT1-212ENST00000528643 CARMIL2Q6F5E8 1435 aa12.49□□□□□ -0.41
FDFT1-212ENST00000528643 ATF5Q9Y2D1 282 aaPredicted RBP12.49□□□□□ -0.41
FDFT1-212ENST00000528643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.48□□□□□ -0.41
FDFT1-212ENST00000528643 DMRT2Q9Y5R5 561 aa12.47□□□□□ -0.41
FDFT1-212ENST00000528643 MYOM3Q5VTT5 1437 aa12.47□□□□□ -0.41
FDFT1-212ENST00000528643 SHROOM2Q13796 1616 aa12.46□□□□□ -0.41
FDFT1-212ENST00000528643 ITGAEP38570 1179 aa12.46□□□□□ -0.42
FDFT1-212ENST00000528643 PLB1Q6P1J6 1458 aa12.46□□□□□ -0.42
FDFT1-212ENST00000528643 FAM50AQ14320 339 aaKnown RBP12.45□□□□□ -0.42
FDFT1-212ENST00000528643 PTPN23Q9H3S7 1636 aa12.44□□□□□ -0.42
FDFT1-212ENST00000528643 ABCA8O94911 1581 aa12.43□□□□□ -0.42
FDFT1-212ENST00000528643 ARID3CA6NKF2 412 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms