RNA–Protein interactions for RNA: ENST00000528276.1

CHEK1-210, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 1,814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-210ENST00000528276 PBRM1Q86U86 1689 aa21.89■■□□□ 1.09
CHEK1-210ENST00000528276 P3H3Q8IVL6 736 aa21.83■■□□□ 1.09
CHEK1-210ENST00000528276 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
CHEK1-210ENST00000528276 ADAMTS12P58397 1594 aa21.82■■□□□ 1.08
CHEK1-210ENST00000528276 CTTNBP2Q8WZ74 1663 aa21.8■■□□□ 1.08
CHEK1-210ENST00000528276 EFCAB5A4FU69 1503 aa21.8■■□□□ 1.08
CHEK1-210ENST00000528276 SNAPC4Q5SXM2 1469 aa21.79■■□□□ 1.08
CHEK1-210ENST00000528276 CHMP7Q8WUX9 453 aaPredicted RBP21.77■■□□□ 1.08
CHEK1-210ENST00000528276 MAGI1Q96QZ7 1491 aaPredicted RBP21.75■■□□□ 1.07
CHEK1-210ENST00000528276 FBLN2P98095 1184 aa21.73■■□□□ 1.07
CHEK1-210ENST00000528276 FHOD3Q2V2M9 1422 aa21.73■■□□□ 1.07
CHEK1-210ENST00000528276 ATP1B4Q9UN42 357 aaPredicted RBP21.73■■□□□ 1.07
CHEK1-210ENST00000528276 GRIN2AQ12879 1464 aa21.69■■□□□ 1.06
CHEK1-210ENST00000528276 SYNJ2O15056 1496 aa21.68■■□□□ 1.06
CHEK1-210ENST00000528276 FMN1Q68DA7 1419 aa21.68■■□□□ 1.06
CHEK1-210ENST00000528276 IQGAP2Q13576 1575 aa21.66■■□□□ 1.06
CHEK1-210ENST00000528276 HRCP23327 699 aa21.66■■□□□ 1.06
CHEK1-210ENST00000528276 KANK4Q5T7N3 995 aaPredicted RBP21.64■■□□□ 1.05
CHEK1-210ENST00000528276 KIAA0586Q9BVV6 1533 aa21.62■■□□□ 1.05
CHEK1-210ENST00000528276 SAMD9Q5K651 1589 aa21.61■■□□□ 1.05
CHEK1-210ENST00000528276 CASKIN1Q8WXD9 1431 aa21.6■■□□□ 1.05
CHEK1-210ENST00000528276 FYCO1Q9BQS8 1478 aa21.59■■□□□ 1.05
CHEK1-210ENST00000528276 MAP3K1Q13233 1512 aa21.58■■□□□ 1.05
CHEK1-210ENST00000528276 PCF11O94913 1555 aaKnown RBP21.56■■□□□ 1.04
CHEK1-210ENST00000528276 TIAM1Q13009 1591 aa21.54■■□□□ 1.04
CHEK1-210ENST00000528276 UGGT2Q9NYU1 1516 aa21.54■■□□□ 1.04
CHEK1-210ENST00000528276 LRRC9Q6ZRR7 1453 aa21.49■■□□□ 1.03
CHEK1-210ENST00000528276 NUP160Q12769 1436 aa21.48■■□□□ 1.03
CHEK1-210ENST00000528276 CEP170Q5SW79 1584 aa21.48■■□□□ 1.03
CHEK1-210ENST00000528276 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
CHEK1-210ENST00000528276 ZEB1P37275 1124 aaPredicted RBP21.45■■□□□ 1.03
CHEK1-210ENST00000528276 JPH4Q96JJ6 628 aa21.45■■□□□ 1.03
CHEK1-210ENST00000528276 CARMIL2Q6F5E8 1435 aa21.45■■□□□ 1.02
CHEK1-210ENST00000528276 CFAP43Q8NDM7 1665 aa21.42■■□□□ 1.02
CHEK1-210ENST00000528276 DISP1Q96F81 1524 aa21.42■■□□□ 1.02
CHEK1-210ENST00000528276 MTUS2Q5JR59 1369 aa21.41■■□□□ 1.02
CHEK1-210ENST00000528276 KIAA0556O60303 1618 aa21.41■■□□□ 1.02
CHEK1-210ENST00000528276 CCER1Q8TC90 406 aaPredicted RBP21.4■■□□□ 1.02
CHEK1-210ENST00000528276 CCDC18Q5T9S5 1454 aa21.38■■□□□ 1.01
CHEK1-210ENST00000528276 CCNB3Q8WWL7 1395 aa21.38■■□□□ 1.01
CHEK1-210ENST00000528276 RRBP1Q9P2E9 1410 aaKnown RBP21.38■■□□□ 1.01
CHEK1-210ENST00000528276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.37■■□□□ 1.01
CHEK1-210ENST00000528276 HECW1Q76N89 1606 aa21.36■■□□□ 1.01
CHEK1-210ENST00000528276 PHLDB1Q86UU1 1377 aa21.31■■□□□ 1
CHEK1-210ENST00000528276 ARID3CA6NKF2 412 aa21.3■■□□□ 1
CHEK1-210ENST00000528276 EPRSP07814 1512 aaKnown RBP21.29■■□□□ 1
CHEK1-210ENST00000528276 FAM50AQ14320 339 aaKnown RBP21.28■■□□□ 1
CHEK1-210ENST00000528276 CHD1O14646 1710 aa21.27■■□□□ 1
CHEK1-210ENST00000528276 ITGAEP38570 1179 aa21.27■■□□□ 1
CHEK1-210ENST00000528276 CDK11AQ9UQ88 783 aaPredicted RBP21.27■■□□□ 1
CHEK1-210ENST00000528276 PRG4Q92954 1404 aaPredicted RBP21.27■■□□□ 1
CHEK1-210ENST00000528276 EHBP1L1Q8N3D4 1523 aa21.26■□□□□ 0.99
CHEK1-210ENST00000528276 RAPGEF6Q8TEU7 1601 aa21.22■□□□□ 0.99
CHEK1-210ENST00000528276 CDK13Q14004 1512 aaKnown RBP21.21■□□□□ 0.99
CHEK1-210ENST00000528276 NCOA2Q15596 1464 aa21.2■□□□□ 0.98
CHEK1-210ENST00000528276 LRRIQ1Q96JM4 1722 aa21.2■□□□□ 0.98
CHEK1-210ENST00000528276 NUP153P49790 1475 aaKnown RBP21.2■□□□□ 0.98
CHEK1-210ENST00000528276 PLB1Q6P1J6 1458 aa21.19■□□□□ 0.98
CHEK1-210ENST00000528276 PTPRGP23470 1445 aa21.19■□□□□ 0.98
CHEK1-210ENST00000528276 SUPT6HQ7KZ85 1726 aaKnown RBP21.18■□□□□ 0.98
CHEK1-210ENST00000528276 FGD6Q6ZV73 1430 aa21.16■□□□□ 0.98
CHEK1-210ENST00000528276 MYOM3Q5VTT5 1437 aa21.15■□□□□ 0.98
CHEK1-210ENST00000528276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.14■□□□□ 0.98
CHEK1-210ENST00000528276 MAGI3Q5TCQ9 1506 aa21.13■□□□□ 0.97
CHEK1-210ENST00000528276 SHROOM2Q13796 1616 aa21.09■□□□□ 0.97
CHEK1-210ENST00000528276 PLEKHD1A6NEE1 506 aa21.09■□□□□ 0.97
CHEK1-210ENST00000528276 ABCA8O94911 1581 aa21.07■□□□□ 0.96
CHEK1-210ENST00000528276 ARHGEF11O15085 1522 aa21.06■□□□□ 0.96
CHEK1-210ENST00000528276 CLASP1Q7Z460 1538 aa21.06■□□□□ 0.96
CHEK1-210ENST00000528276 TROQ12816 1431 aaPredicted RBP21.05■□□□□ 0.96
CHEK1-210ENST00000528276 UACAQ9BZF9 1416 aa21.03■□□□□ 0.96
CHEK1-210ENST00000528276 MIA2Q96PC5 1412 aa21.02■□□□□ 0.96
CHEK1-210ENST00000528276 SETD5Q9C0A6 1442 aa21.01■□□□□ 0.95
CHEK1-210ENST00000528276 ATP10BO94823 1461 aa21■□□□□ 0.95
CHEK1-210ENST00000528276 OSCARQ8IYS5 282 aa21■□□□□ 0.95
CHEK1-210ENST00000528276 RAB3GAP2Q9H2M9 1393 aa20.98■□□□□ 0.95
CHEK1-210ENST00000528276 PTPN23Q9H3S7 1636 aa20.98■□□□□ 0.95
CHEK1-210ENST00000528276 ERCC6L2Q5T890 1561 aa20.97■□□□□ 0.95
CHEK1-210ENST00000528276 CLSPNQ9HAW4 1339 aa20.95■□□□□ 0.94
CHEK1-210ENST00000528276 CFDP1Q9UEE9 299 aaPredicted RBP20.94■□□□□ 0.94
CHEK1-210ENST00000528276 TCOF1Q13428 1488 aaKnown RBP20.94■□□□□ 0.94
CHEK1-210ENST00000528276 DHX57Q6P158 1386 aaKnown RBP20.93■□□□□ 0.94
CHEK1-210ENST00000528276 ABCC2Q92887 1545 aa20.91■□□□□ 0.94
CHEK1-210ENST00000528276 KIF14Q15058 1648 aa20.89■□□□□ 0.93
CHEK1-210ENST00000528276 ZNF777Q9ULD5 760 aaPredicted RBP20.88■□□□□ 0.93
CHEK1-210ENST00000528276 ADCY10Q96PN6 1610 aa20.87■□□□□ 0.93
CHEK1-210ENST00000528276 CHIC2Q9UKJ5 165 aa20.87■□□□□ 0.93
CHEK1-210ENST00000528276 PTPRKQ15262 1439 aa20.87■□□□□ 0.93
CHEK1-210ENST00000528276 GPATCH8Q9UKJ3 1502 aaKnown RBP20.86■□□□□ 0.93
CHEK1-210ENST00000528276 HFM1A2PYH4 1435 aa20.85■□□□□ 0.93
CHEK1-210ENST00000528276 UHRF1BP1LA0JNW5 1464 aa20.83■□□□□ 0.93
CHEK1-210ENST00000528276 ZNF644Q9H582 1327 aaPredicted RBP20.83■□□□□ 0.93
CHEK1-210ENST00000528276 ITSN2Q9NZM3 1697 aa20.83■□□□□ 0.93
CHEK1-210ENST00000528276 RRP7BPQ9NSQ0 103 aa20.81■□□□□ 0.92
CHEK1-210ENST00000528276 DAPK1P53355 1430 aa20.8■□□□□ 0.92
CHEK1-210ENST00000528276 ABCC10Q5T3U5 1492 aa20.79■□□□□ 0.92
CHEK1-210ENST00000528276 NAIPQ13075 1403 aa20.78■□□□□ 0.92
CHEK1-210ENST00000528276 KCNH8Q96L42 1107 aa20.78■□□□□ 0.92
CHEK1-210ENST00000528276 CAMSAP2Q08AD1 1489 aa20.78■□□□□ 0.92
CHEK1-210ENST00000528276 KDM5BQ9UGL1 1544 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms