RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-223ENST00000522746 CTTNBP2Q8WZ74 1663 aa25.49■■□□□ 1.67
FAM49B-223ENST00000522746 GRIN2BQ13224 1484 aa25.48■■□□□ 1.67
FAM49B-223ENST00000522746 P3H3Q8IVL6 736 aa25.48■■□□□ 1.67
FAM49B-223ENST00000522746 ZEB1P37275 1124 aaPredicted RBP25.47■■□□□ 1.67
FAM49B-223ENST00000522746 EIF4G3O43432 1585 aaKnown RBP25.47■■□□□ 1.67
FAM49B-223ENST00000522746 ADAMTS12P58397 1594 aa25.45■■□□□ 1.66
FAM49B-223ENST00000522746 KANK4Q5T7N3 995 aaPredicted RBP25.44■■□□□ 1.66
FAM49B-223ENST00000522746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.43■■□□□ 1.66
FAM49B-223ENST00000522746 FHAD1B1AJZ9 1412 aa25.43■■□□□ 1.66
FAM49B-223ENST00000522746 SNAPC4Q5SXM2 1469 aa25.39■■□□□ 1.66
FAM49B-223ENST00000522746 EFCAB5A4FU69 1503 aa25.36■■□□□ 1.65
FAM49B-223ENST00000522746 FHOD3Q2V2M9 1422 aa25.36■■□□□ 1.65
FAM49B-223ENST00000522746 CCER1Q8TC90 406 aaPredicted RBP25.32■■□□□ 1.64
FAM49B-223ENST00000522746 PCF11O94913 1555 aaKnown RBP25.3■■□□□ 1.64
FAM49B-223ENST00000522746 HNRNPUL2Q1KMD3 747 aaKnown RBP25.29■■□□□ 1.64
FAM49B-223ENST00000522746 TIAM1Q13009 1591 aa25.29■■□□□ 1.64
FAM49B-223ENST00000522746 MAP3K1Q13233 1512 aa25.27■■□□□ 1.64
FAM49B-223ENST00000522746 SAMD9Q5K651 1589 aa25.24■■□□□ 1.63
FAM49B-223ENST00000522746 GRIN2AQ12879 1464 aa25.21■■□□□ 1.63
FAM49B-223ENST00000522746 FBLN2P98095 1184 aa25.21■■□□□ 1.63
FAM49B-223ENST00000522746 MAGI1Q96QZ7 1491 aaPredicted RBP25.2■■□□□ 1.63
FAM49B-223ENST00000522746 ATP1B4Q9UN42 357 aaPredicted RBP25.2■■□□□ 1.62
FAM49B-223ENST00000522746 CFAP43Q8NDM7 1665 aa25.19■■□□□ 1.62
FAM49B-223ENST00000522746 FYCO1Q9BQS8 1478 aa25.19■■□□□ 1.62
FAM49B-223ENST00000522746 IQGAP2Q13576 1575 aa25.19■■□□□ 1.62
FAM49B-223ENST00000522746 CHMP7Q8WUX9 453 aaPredicted RBP25.18■■□□□ 1.62
FAM49B-223ENST00000522746 CASKIN1Q8WXD9 1431 aa25.18■■□□□ 1.62
FAM49B-223ENST00000522746 LRRC9Q6ZRR7 1453 aa25.17■■□□□ 1.62
FAM49B-223ENST00000522746 RRBP1Q9P2E9 1410 aaKnown RBP25.17■■□□□ 1.62
FAM49B-223ENST00000522746 FMN1Q68DA7 1419 aa25.16■■□□□ 1.62
FAM49B-223ENST00000522746 SYNJ2O15056 1496 aa25.15■■□□□ 1.62
FAM49B-223ENST00000522746 CEP170Q5SW79 1584 aa25.1■■□□□ 1.61
FAM49B-223ENST00000522746 KIAA0586Q9BVV6 1533 aa25.09■■□□□ 1.61
FAM49B-223ENST00000522746 CCNB3Q8WWL7 1395 aa25.08■■□□□ 1.6
FAM49B-223ENST00000522746 UGGT2Q9NYU1 1516 aa25.04■■□□□ 1.6
FAM49B-223ENST00000522746 LRRIQ1Q96JM4 1722 aa25.03■■□□□ 1.6
FAM49B-223ENST00000522746 PHLDB1Q86UU1 1377 aa25.03■■□□□ 1.6
FAM49B-223ENST00000522746 DISP1Q96F81 1524 aa25■■□□□ 1.59
FAM49B-223ENST00000522746 NUP160Q12769 1436 aa24.99■■□□□ 1.59
FAM49B-223ENST00000522746 KIAA0556O60303 1618 aa24.95■■□□□ 1.58
FAM49B-223ENST00000522746 ITGAEP38570 1179 aa24.92■■□□□ 1.58
FAM49B-223ENST00000522746 ARID3CA6NKF2 412 aa24.91■■□□□ 1.58
FAM49B-223ENST00000522746 CHD1O14646 1710 aa24.9■■□□□ 1.58
FAM49B-223ENST00000522746 MTUS2Q5JR59 1369 aa24.89■■□□□ 1.58
FAM49B-223ENST00000522746 JPH4Q96JJ6 628 aa24.88■■□□□ 1.57
FAM49B-223ENST00000522746 HECW1Q76N89 1606 aa24.86■■□□□ 1.57
FAM49B-223ENST00000522746 FAM50AQ14320 339 aaKnown RBP24.84■■□□□ 1.57
FAM49B-223ENST00000522746 CCDC18Q5T9S5 1454 aa24.83■■□□□ 1.57
FAM49B-223ENST00000522746 CDK13Q14004 1512 aaKnown RBP24.81■■□□□ 1.56
FAM49B-223ENST00000522746 MAGI3Q5TCQ9 1506 aa24.81■■□□□ 1.56
FAM49B-223ENST00000522746 EHBP1L1Q8N3D4 1523 aa24.81■■□□□ 1.56
FAM49B-223ENST00000522746 EPRSP07814 1512 aaKnown RBP24.79■■□□□ 1.56
FAM49B-223ENST00000522746 DHX57Q6P158 1386 aaKnown RBP24.79■■□□□ 1.56
FAM49B-223ENST00000522746 NCOA2Q15596 1464 aa24.78■■□□□ 1.56
FAM49B-223ENST00000522746 SUPT6HQ7KZ85 1726 aaKnown RBP24.78■■□□□ 1.56
FAM49B-223ENST00000522746 FGD6Q6ZV73 1430 aa24.77■■□□□ 1.56
FAM49B-223ENST00000522746 CARMIL2Q6F5E8 1435 aa24.74■■□□□ 1.55
FAM49B-223ENST00000522746 PLB1Q6P1J6 1458 aa24.73■■□□□ 1.55
FAM49B-223ENST00000522746 NUP153P49790 1475 aaKnown RBP24.73■■□□□ 1.55
FAM49B-223ENST00000522746 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.73■■□□□ 1.555e-6■■■□□ 14.8
FAM49B-223ENST00000522746 RAPGEF6Q8TEU7 1601 aa24.72■■□□□ 1.55
FAM49B-223ENST00000522746 PRG4Q92954 1404 aaPredicted RBP24.71■■□□□ 1.55
FAM49B-223ENST00000522746 RAB3GAP2Q9H2M9 1393 aa24.71■■□□□ 1.55
FAM49B-223ENST00000522746 MYOM3Q5VTT5 1437 aa24.7■■□□□ 1.55
FAM49B-223ENST00000522746 ARHGEF11O15085 1522 aa24.7■■□□□ 1.54
FAM49B-223ENST00000522746 SETD5Q9C0A6 1442 aa24.67■■□□□ 1.54
FAM49B-223ENST00000522746 CLSPNQ9HAW4 1339 aa24.66■■□□□ 1.54
FAM49B-223ENST00000522746 ERCC6L2Q5T890 1561 aa24.62■■□□□ 1.53
FAM49B-223ENST00000522746 PTPN23Q9H3S7 1636 aa24.6■■□□□ 1.53
FAM49B-223ENST00000522746 SHROOM2Q13796 1616 aa24.59■■□□□ 1.53
FAM49B-223ENST00000522746 PTPRKQ15262 1439 aa24.57■■□□□ 1.52
FAM49B-223ENST00000522746 ABCA8O94911 1581 aa24.56■■□□□ 1.52
FAM49B-223ENST00000522746 PTPRGP23470 1445 aa24.56■■□□□ 1.52
FAM49B-223ENST00000522746 CLASP1Q7Z460 1538 aa24.55■■□□□ 1.52
FAM49B-223ENST00000522746 TCOF1Q13428 1488 aaKnown RBP24.52■■□□□ 1.52
FAM49B-223ENST00000522746 MAPKBP1O60336 1514 aa24.51■■□□□ 1.51
FAM49B-223ENST00000522746 CDK11AQ9UQ88 783 aaPredicted RBP24.48■■□□□ 1.51
FAM49B-223ENST00000522746 MIA2Q96PC5 1412 aa24.47■■□□□ 1.51
FAM49B-223ENST00000522746 ATP10BO94823 1461 aa24.47■■□□□ 1.51
FAM49B-223ENST00000522746 HFM1A2PYH4 1435 aa24.46■■□□□ 1.51
FAM49B-223ENST00000522746 ZNF316A6NFI3 1004 aaPredicted RBP24.45■■□□□ 1.5
FAM49B-223ENST00000522746 TROQ12816 1431 aaPredicted RBP24.44■■□□□ 1.5
FAM49B-223ENST00000522746 KIF14Q15058 1648 aa24.42■■□□□ 1.5
FAM49B-223ENST00000522746 NAIPQ13075 1403 aa24.41■■□□□ 1.5
FAM49B-223ENST00000522746 UACAQ9BZF9 1416 aa24.39■■□□□ 1.49
FAM49B-223ENST00000522746 DIEXFQ68CQ4 756 aaKnown RBP24.37■■□□□ 1.49
FAM49B-223ENST00000522746 ZNF644Q9H582 1327 aaPredicted RBP24.37■■□□□ 1.49
FAM49B-223ENST00000522746 ADCY10Q96PN6 1610 aa24.37■■□□□ 1.49
FAM49B-223ENST00000522746 CHIC2Q9UKJ5 165 aa24.36■■□□□ 1.49
FAM49B-223ENST00000522746 PLEKHD1A6NEE1 506 aa24.35■■□□□ 1.49
FAM49B-223ENST00000522746 RRP7BPQ9NSQ0 103 aa24.33■■□□□ 1.49
FAM49B-223ENST00000522746 GCC2Q8IWJ2 1684 aa24.31■■□□□ 1.48
FAM49B-223ENST00000522746 ITSN2Q9NZM3 1697 aa24.3■■□□□ 1.48
FAM49B-223ENST00000522746 ABCC2Q92887 1545 aa24.29■■□□□ 1.48
FAM49B-223ENST00000522746 SIN3AQ96ST3 1273 aa24.29■■□□□ 1.48
FAM49B-223ENST00000522746 GPATCH8Q9UKJ3 1502 aaKnown RBP24.29■■□□□ 1.48
FAM49B-223ENST00000522746 DNMT1P26358 1616 aaKnown RBP24.29■■□□□ 1.48
FAM49B-223ENST00000522746 DAPK1P53355 1430 aa24.28■■□□□ 1.48
FAM49B-223ENST00000522746 AKNAQ7Z591 1439 aa24.28■■□□□ 1.48
FAM49B-223ENST00000522746 OSCARQ8IYS5 282 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms