RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 EIF4G3O43432 1585 aaKnown RBP28.39■■■□□ 2.13
TRAPPC9-210ENST00000521667 CTTNBP2Q8WZ74 1663 aa28.35■■■□□ 2.13
TRAPPC9-210ENST00000521667 GRIN2BQ13224 1484 aa28.34■■■□□ 2.13
TRAPPC9-210ENST00000521667 EFCAB5A4FU69 1503 aa28.29■■■□□ 2.12
TRAPPC9-210ENST00000521667 FHAD1B1AJZ9 1412 aa28.27■■■□□ 2.12
TRAPPC9-210ENST00000521667 ADAMTS12P58397 1594 aa28.27■■■□□ 2.12
TRAPPC9-210ENST00000521667 SNAPC4Q5SXM2 1469 aa28.23■■■□□ 2.11
TRAPPC9-210ENST00000521667 ZEB1P37275 1124 aaPredicted RBP28.22■■■□□ 2.11
TRAPPC9-210ENST00000521667 KANK4Q5T7N3 995 aaPredicted RBP28.19■■■□□ 2.1
TRAPPC9-210ENST00000521667 P3H3Q8IVL6 736 aa28.18■■■□□ 2.1
TRAPPC9-210ENST00000521667 FHOD3Q2V2M9 1422 aa28.17■■■□□ 2.1
TRAPPC9-210ENST00000521667 MAP3K1Q13233 1512 aa28.16■■■□□ 2.1
TRAPPC9-210ENST00000521667 SAMD9Q5K651 1589 aa28.11■■■□□ 2.09
TRAPPC9-210ENST00000521667 TIAM1Q13009 1591 aa28.1■■■□□ 2.09
TRAPPC9-210ENST00000521667 PCF11O94913 1555 aaKnown RBP28.1■■■□□ 2.09
TRAPPC9-210ENST00000521667 MAGI1Q96QZ7 1491 aaPredicted RBP28.09■■■□□ 2.09
TRAPPC9-210ENST00000521667 FMN1Q68DA7 1419 aa28.06■■■□□ 2.08
TRAPPC9-210ENST00000521667 FYCO1Q9BQS8 1478 aa28.06■■■□□ 2.08
TRAPPC9-210ENST00000521667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.04■■■□□ 2.08
TRAPPC9-210ENST00000521667 CASKIN1Q8WXD9 1431 aa28.04■■■□□ 2.08
TRAPPC9-210ENST00000521667 GRIN2AQ12879 1464 aa28.02■■■□□ 2.08
TRAPPC9-210ENST00000521667 IQGAP2Q13576 1575 aa28.01■■■□□ 2.07
TRAPPC9-210ENST00000521667 SYNJ2O15056 1496 aa28.01■■■□□ 2.07
TRAPPC9-210ENST00000521667 FBLN2P98095 1184 aa28.01■■■□□ 2.07
TRAPPC9-210ENST00000521667 CFAP43Q8NDM7 1665 aa27.99■■■□□ 2.07
TRAPPC9-210ENST00000521667 CHMP7Q8WUX9 453 aaPredicted RBP27.99■■■□□ 2.07
TRAPPC9-210ENST00000521667 CCER1Q8TC90 406 aaPredicted RBP27.99■■■□□ 2.07
TRAPPC9-210ENST00000521667 LRRC9Q6ZRR7 1453 aa27.99■■■□□ 2.07
TRAPPC9-210ENST00000521667 HNRNPUL2Q1KMD3 747 aaKnown RBP27.97■■■□□ 2.07
TRAPPC9-210ENST00000521667 RRBP1Q9P2E9 1410 aaKnown RBP27.96■■■□□ 2.07
TRAPPC9-210ENST00000521667 ATP1B4Q9UN42 357 aaPredicted RBP27.94■■■□□ 2.06
TRAPPC9-210ENST00000521667 KIAA0586Q9BVV6 1533 aa27.91■■■□□ 2.06
TRAPPC9-210ENST00000521667 CEP170Q5SW79 1584 aa27.89■■■□□ 2.06
TRAPPC9-210ENST00000521667 UGGT2Q9NYU1 1516 aa27.88■■■□□ 2.05
TRAPPC9-210ENST00000521667 CCNB3Q8WWL7 1395 aa27.85■■■□□ 2.05
TRAPPC9-210ENST00000521667 CHD1O14646 1710 aa27.82■■■□□ 2.04
TRAPPC9-210ENST00000521667 NUP160Q12769 1436 aa27.8■■■□□ 2.04
TRAPPC9-210ENST00000521667 PHLDB1Q86UU1 1377 aa27.77■■■□□ 2.04
TRAPPC9-210ENST00000521667 DISP1Q96F81 1524 aa27.73■■■□□ 2.03
TRAPPC9-210ENST00000521667 LRRIQ1Q96JM4 1722 aa27.73■■■□□ 2.03
TRAPPC9-210ENST00000521667 KIAA0556O60303 1618 aa27.72■■■□□ 2.03
TRAPPC9-210ENST00000521667 HECW1Q76N89 1606 aa27.7■■■□□ 2.02
TRAPPC9-210ENST00000521667 MTUS2Q5JR59 1369 aa27.7■■■□□ 2.02
TRAPPC9-210ENST00000521667 CCDC18Q5T9S5 1454 aa27.7■■■□□ 2.02
TRAPPC9-210ENST00000521667 EHBP1L1Q8N3D4 1523 aa27.63■■■□□ 2.01
TRAPPC9-210ENST00000521667 JPH4Q96JJ6 628 aa27.62■■■□□ 2.01
TRAPPC9-210ENST00000521667 EPRSP07814 1512 aaKnown RBP27.61■■■□□ 2.01
TRAPPC9-210ENST00000521667 ITGAEP38570 1179 aa27.58■■■□□ 2.01
TRAPPC9-210ENST00000521667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.56■■■□□ 22e-6■■■■■ 42.3
TRAPPC9-210ENST00000521667 NCOA2Q15596 1464 aa27.56■■■□□ 2
TRAPPC9-210ENST00000521667 FAM50AQ14320 339 aaKnown RBP27.55■■■□□ 2
TRAPPC9-210ENST00000521667 SUPT6HQ7KZ85 1726 aaKnown RBP27.55■■■□□ 2
TRAPPC9-210ENST00000521667 MAGI3Q5TCQ9 1506 aa27.55■■■□□ 2
TRAPPC9-210ENST00000521667 CARMIL2Q6F5E8 1435 aa27.54■■■□□ 2
TRAPPC9-210ENST00000521667 FGD6Q6ZV73 1430 aa27.54■■■□□ 2
TRAPPC9-210ENST00000521667 CDK13Q14004 1512 aaKnown RBP27.52■■■□□ 2
TRAPPC9-210ENST00000521667 RAPGEF6Q8TEU7 1601 aa27.5■■□□□ 1.99
TRAPPC9-210ENST00000521667 ARHGEF11O15085 1522 aa27.49■■□□□ 1.99
TRAPPC9-210ENST00000521667 MYOM3Q5VTT5 1437 aa27.48■■□□□ 1.99
TRAPPC9-210ENST00000521667 NUP153P49790 1475 aaKnown RBP27.47■■□□□ 1.99
TRAPPC9-210ENST00000521667 DHX57Q6P158 1386 aaKnown RBP27.46■■□□□ 1.99
TRAPPC9-210ENST00000521667 PRG4Q92954 1404 aaPredicted RBP27.46■■□□□ 1.99
TRAPPC9-210ENST00000521667 CLASP1Q7Z460 1538 aa27.44■■□□□ 1.98
TRAPPC9-210ENST00000521667 SHROOM2Q13796 1616 aa27.43■■□□□ 1.98
TRAPPC9-210ENST00000521667 CLSPNQ9HAW4 1339 aa27.43■■□□□ 1.98
TRAPPC9-210ENST00000521667 ARID3CA6NKF2 412 aa27.42■■□□□ 1.98
TRAPPC9-210ENST00000521667 SETD5Q9C0A6 1442 aa27.4■■□□□ 1.98
TRAPPC9-210ENST00000521667 RAB3GAP2Q9H2M9 1393 aa27.4■■□□□ 1.98
TRAPPC9-210ENST00000521667 PLB1Q6P1J6 1458 aa27.39■■□□□ 1.97
TRAPPC9-210ENST00000521667 ERCC6L2Q5T890 1561 aa27.38■■□□□ 1.97
TRAPPC9-210ENST00000521667 CDK11AQ9UQ88 783 aaPredicted RBP27.34■■□□□ 1.97
TRAPPC9-210ENST00000521667 PTPN23Q9H3S7 1636 aa27.33■■□□□ 1.97
TRAPPC9-210ENST00000521667 TCOF1Q13428 1488 aaKnown RBP27.3■■□□□ 1.96
TRAPPC9-210ENST00000521667 ABCA8O94911 1581 aa27.29■■□□□ 1.96
TRAPPC9-210ENST00000521667 MIA2Q96PC5 1412 aa27.29■■□□□ 1.96
TRAPPC9-210ENST00000521667 PTPRGP23470 1445 aa27.26■■□□□ 1.95
TRAPPC9-210ENST00000521667 TROQ12816 1431 aaPredicted RBP27.25■■□□□ 1.95
TRAPPC9-210ENST00000521667 PTPRKQ15262 1439 aa27.25■■□□□ 1.95
TRAPPC9-210ENST00000521667 OSCARQ8IYS5 282 aa27.22■■□□□ 1.95
TRAPPC9-210ENST00000521667 HFM1A2PYH4 1435 aa27.19■■□□□ 1.94
TRAPPC9-210ENST00000521667 ATP10BO94823 1461 aa27.15■■□□□ 1.94
TRAPPC9-210ENST00000521667 ADCY10Q96PN6 1610 aa27.15■■□□□ 1.94
TRAPPC9-210ENST00000521667 MAPKBP1O60336 1514 aa27.14■■□□□ 1.93
TRAPPC9-210ENST00000521667 NAIPQ13075 1403 aa27.11■■□□□ 1.93
TRAPPC9-210ENST00000521667 UACAQ9BZF9 1416 aa27.1■■□□□ 1.93
TRAPPC9-210ENST00000521667 PLEKHD1A6NEE1 506 aa27.09■■□□□ 1.93
TRAPPC9-210ENST00000521667 KIF14Q15058 1648 aa27.09■■□□□ 1.93
TRAPPC9-210ENST00000521667 AKNAQ7Z591 1439 aa27.06■■□□□ 1.92
TRAPPC9-210ENST00000521667 ITSN2Q9NZM3 1697 aa27.05■■□□□ 1.92
TRAPPC9-210ENST00000521667 GPATCH8Q9UKJ3 1502 aaKnown RBP27.04■■□□□ 1.92
TRAPPC9-210ENST00000521667 ZNF316A6NFI3 1004 aaPredicted RBP27.02■■□□□ 1.92
TRAPPC9-210ENST00000521667 ABCC2Q92887 1545 aa27.02■■□□□ 1.92
TRAPPC9-210ENST00000521667 DAPK1P53355 1430 aa27.01■■□□□ 1.91
TRAPPC9-210ENST00000521667 CHIC2Q9UKJ5 165 aa27.01■■□□□ 1.91
TRAPPC9-210ENST00000521667 CFDP1Q9UEE9 299 aaPredicted RBP27■■□□□ 1.91
TRAPPC9-210ENST00000521667 DNMT1P26358 1616 aaKnown RBP27■■□□□ 1.91
TRAPPC9-210ENST00000521667 ZNF644Q9H582 1327 aaPredicted RBP27■■□□□ 1.91
TRAPPC9-210ENST00000521667 GCC2Q8IWJ2 1684 aa26.99■■□□□ 1.91
TRAPPC9-210ENST00000521667 ABCC10Q5T3U5 1492 aa26.98■■□□□ 1.91
TRAPPC9-210ENST00000521667 RRP7BPQ9NSQ0 103 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms