RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 TTBK1Q5TCY1 1321 aaPredicted RBP41.59■■■■■ 4.25
COL13A1-212ENST00000520133 FHAD1B1AJZ9 1412 aa41.54■■■■■ 4.24
COL13A1-212ENST00000520133 ZNF608Q9ULD9 1512 aaPredicted RBP41.52■■■■■ 4.24
COL13A1-212ENST00000520133 ADAMTS12P58397 1594 aa41.5■■■■■ 4.23
COL13A1-212ENST00000520133 EFCAB5A4FU69 1503 aa41.49■■■■■ 4.23
COL13A1-212ENST00000520133 EIF4G3O43432 1585 aaKnown RBP41.43■■■■■ 4.22
COL13A1-212ENST00000520133 SNAPC4Q5SXM2 1469 aa41.25■■■■■ 4.19
COL13A1-212ENST00000520133 P3H3Q8IVL6 736 aa41.24■■■■■ 4.19
COL13A1-212ENST00000520133 FHOD3Q2V2M9 1422 aa41.24■■■■■ 4.19
COL13A1-212ENST00000520133 SAMD9Q5K651 1589 aa41.23■■■■■ 4.19
COL13A1-212ENST00000520133 MAP3K1Q13233 1512 aa41.22■■■■■ 4.19
COL13A1-212ENST00000520133 MAGI1Q96QZ7 1491 aaPredicted RBP41.19■■■■■ 4.18
COL13A1-212ENST00000520133 IQGAP2Q13576 1575 aa41.16■■■■■ 4.18
COL13A1-212ENST00000520133 PCF11O94913 1555 aaKnown RBP41.14■■■■■ 4.18
COL13A1-212ENST00000520133 FMN1Q68DA7 1419 aa41.14■■■■■ 4.18
COL13A1-212ENST00000520133 KANK4Q5T7N3 995 aaPredicted RBP41.14■■■■■ 4.18
COL13A1-212ENST00000520133 TIAM1Q13009 1591 aa41.13■■■■■ 4.18
COL13A1-212ENST00000520133 FYCO1Q9BQS8 1478 aa41.1■■■■■ 4.17
COL13A1-212ENST00000520133 GRIN2AQ12879 1464 aa41.09■■■■■ 4.17
COL13A1-212ENST00000520133 CASKIN1Q8WXD9 1431 aa41.07■■■■■ 4.16
COL13A1-212ENST00000520133 SYNJ2O15056 1496 aa41.03■■■■■ 4.16
COL13A1-212ENST00000520133 CFAP43Q8NDM7 1665 aa41.03■■■■■ 4.16
COL13A1-212ENST00000520133 ZEB1P37275 1124 aaPredicted RBP41.01■■■■■ 4.16
COL13A1-212ENST00000520133 KIAA0586Q9BVV6 1533 aa40.99■■■■■ 4.15
COL13A1-212ENST00000520133 CHMP7Q8WUX9 453 aaPredicted RBP40.95■■■■■ 4.15
COL13A1-212ENST00000520133 UGGT2Q9NYU1 1516 aa40.94■■■■■ 4.14
COL13A1-212ENST00000520133 LRRC9Q6ZRR7 1453 aa40.93■■■■■ 4.14
COL13A1-212ENST00000520133 ATP1B4Q9UN42 357 aaPredicted RBP40.92■■■■■ 4.14
COL13A1-212ENST00000520133 RRBP1Q9P2E9 1410 aaKnown RBP40.82■■■■■ 4.13
COL13A1-212ENST00000520133 CEP170Q5SW79 1584 aa40.8■■■■■ 4.12
COL13A1-212ENST00000520133 FBLN2P98095 1184 aa40.79■■■■■ 4.12
COL13A1-212ENST00000520133 HNRNPUL2Q1KMD3 747 aaKnown RBP40.77■■■■■ 4.12
COL13A1-212ENST00000520133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.75■■■■■ 4.11
COL13A1-212ENST00000520133 NUP160Q12769 1436 aa40.74■■■■■ 4.11
COL13A1-212ENST00000520133 KIAA0556O60303 1618 aa40.72■■■■■ 4.11
COL13A1-212ENST00000520133 CCER1Q8TC90 406 aaPredicted RBP40.72■■■■■ 4.11
COL13A1-212ENST00000520133 LRRIQ1Q96JM4 1722 aa40.7■■■■■ 4.11
COL13A1-212ENST00000520133 DISP1Q96F81 1524 aa40.69■■■■■ 4.1
COL13A1-212ENST00000520133 CCNB3Q8WWL7 1395 aa40.68■■■■■ 4.1
COL13A1-212ENST00000520133 HECW1Q76N89 1606 aa40.66■■■■■ 4.1
COL13A1-212ENST00000520133 CCDC18Q5T9S5 1454 aa40.62■■■■■ 4.09
COL13A1-212ENST00000520133 MTUS2Q5JR59 1369 aa40.57■■■■■ 4.08
COL13A1-212ENST00000520133 PHLDB1Q86UU1 1377 aa40.55■■■■■ 4.08
COL13A1-212ENST00000520133 CARMIL2Q6F5E8 1435 aa40.5■■■■■ 4.07
COL13A1-212ENST00000520133 JPH4Q96JJ6 628 aa40.49■■■■■ 4.07
COL13A1-212ENST00000520133 EHBP1L1Q8N3D4 1523 aa40.48■■■■■ 4.07
COL13A1-212ENST00000520133 CHD1O14646 1710 aa40.48■■■■■ 4.07
COL13A1-212ENST00000520133 EPRSP07814 1512 aaKnown RBP40.47■■■■■ 4.07
COL13A1-212ENST00000520133 SUPT6HQ7KZ85 1726 aaKnown RBP40.43■■■■■ 4.06
COL13A1-212ENST00000520133 RAPGEF6Q8TEU7 1601 aa40.4■■■■■ 4.06
COL13A1-212ENST00000520133 NCOA2Q15596 1464 aa40.33■■■■■ 4.05
COL13A1-212ENST00000520133 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.32■■■■■ 4.05
COL13A1-212ENST00000520133 CDK13Q14004 1512 aaKnown RBP40.31■■■■■ 4.04
COL13A1-212ENST00000520133 MAGI3Q5TCQ9 1506 aa40.3■■■■■ 4.04
COL13A1-212ENST00000520133 FAM50AQ14320 339 aaKnown RBP40.28■■■■■ 4.04
COL13A1-212ENST00000520133 NUP153P49790 1475 aaKnown RBP40.27■■■■■ 4.04
COL13A1-212ENST00000520133 FGD6Q6ZV73 1430 aa40.27■■■■■ 4.04
COL13A1-212ENST00000520133 ITGAEP38570 1179 aa40.25■■■■■ 4.03
COL13A1-212ENST00000520133 ARHGEF11O15085 1522 aa40.23■■■■■ 4.03
COL13A1-212ENST00000520133 MYOM3Q5VTT5 1437 aa40.22■■■■■ 4.03
COL13A1-212ENST00000520133 PRG4Q92954 1404 aaPredicted RBP40.17■■■■■ 4.02
COL13A1-212ENST00000520133 PLB1Q6P1J6 1458 aa40.17■■■■■ 4.02
COL13A1-212ENST00000520133 ARID3CA6NKF2 412 aa40.14■■■■■ 4.02
COL13A1-212ENST00000520133 CDK11AQ9UQ88 783 aaPredicted RBP40.14■■■■■ 4.02
COL13A1-212ENST00000520133 SHROOM2Q13796 1616 aa40.14■■■■■ 4.02
COL13A1-212ENST00000520133 ABCA8O94911 1581 aa40.08■■■■■ 4.01
COL13A1-212ENST00000520133 PTPN23Q9H3S7 1636 aa40.04■■■■■ 4
COL13A1-212ENST00000520133 PTPRGP23470 1445 aa40.01■■■■□ 3.99
COL13A1-212ENST00000520133 SETD5Q9C0A6 1442 aa40.01■■■■□ 3.99
COL13A1-212ENST00000520133 CLSPNQ9HAW4 1339 aa40■■■■□ 3.99
COL13A1-212ENST00000520133 DHX57Q6P158 1386 aaKnown RBP40■■■■□ 3.99
COL13A1-212ENST00000520133 MIA2Q96PC5 1412 aa39.97■■■■□ 3.99
COL13A1-212ENST00000520133 RAB3GAP2Q9H2M9 1393 aa39.97■■■■□ 3.99
COL13A1-212ENST00000520133 TROQ12816 1431 aaPredicted RBP39.96■■■■□ 3.99
COL13A1-212ENST00000520133 CLASP1Q7Z460 1538 aa39.95■■■■□ 3.99
COL13A1-212ENST00000520133 TCOF1Q13428 1488 aaKnown RBP39.95■■■■□ 3.99
COL13A1-212ENST00000520133 ADCY10Q96PN6 1610 aa39.87■■■■□ 3.97
COL13A1-212ENST00000520133 ATP10BO94823 1461 aa39.84■■■■□ 3.97
COL13A1-212ENST00000520133 PLEKHD1A6NEE1 506 aa39.79■■■■□ 3.96
COL13A1-212ENST00000520133 UACAQ9BZF9 1416 aa39.78■■■■□ 3.96
COL13A1-212ENST00000520133 PTPRKQ15262 1439 aa39.77■■■■□ 3.96
COL13A1-212ENST00000520133 ERCC6L2Q5T890 1561 aa39.77■■■■□ 3.96
COL13A1-212ENST00000520133 ITSN2Q9NZM3 1697 aa39.77■■■■□ 3.96
COL13A1-212ENST00000520133 HFM1A2PYH4 1435 aa39.74■■■■□ 3.95
COL13A1-212ENST00000520133 KIF14Q15058 1648 aa39.72■■■■□ 3.95
COL13A1-212ENST00000520133 ABCC2Q92887 1545 aa39.64■■■■□ 3.94
COL13A1-212ENST00000520133 GPATCH8Q9UKJ3 1502 aaKnown RBP39.63■■■■□ 3.93
COL13A1-212ENST00000520133 NAIPQ13075 1403 aa39.61■■■■□ 3.93
COL13A1-212ENST00000520133 AKNAQ7Z591 1439 aa39.59■■■■□ 3.93
COL13A1-212ENST00000520133 CFDP1Q9UEE9 299 aaPredicted RBP39.58■■■■□ 3.93
COL13A1-212ENST00000520133 DNMT1P26358 1616 aaKnown RBP39.58■■■■□ 3.93
COL13A1-212ENST00000520133 GCC2Q8IWJ2 1684 aa39.55■■■■□ 3.92
COL13A1-212ENST00000520133 ABCC10Q5T3U5 1492 aa39.55■■■■□ 3.92
COL13A1-212ENST00000520133 MAPKBP1O60336 1514 aa39.54■■■■□ 3.92
COL13A1-212ENST00000520133 DAPK1P53355 1430 aa39.54■■■■□ 3.92
COL13A1-212ENST00000520133 CDC42BPAQ5VT25 1732 aa39.53■■■■□ 3.92
COL13A1-212ENST00000520133 CAMSAP2Q08AD1 1489 aa39.51■■■■□ 3.92
COL13A1-212ENST00000520133 UHRF1BP1LA0JNW5 1464 aa39.5■■■■□ 3.91
COL13A1-212ENST00000520133 CHIC2Q9UKJ5 165 aa39.49■■■■□ 3.91
COL13A1-212ENST00000520133 ZNF644Q9H582 1327 aaPredicted RBP39.49■■■■□ 3.91
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms