RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 GRIN2BQ13224 1484 aa25.51■■□□□ 1.67
PCM1-206ENST00000518537 ZNF608Q9ULD9 1512 aaPredicted RBP25.49■■□□□ 1.67
PCM1-206ENST00000518537 FHAD1B1AJZ9 1412 aa25.49■■□□□ 1.67
PCM1-206ENST00000518537 ADAMTS12P58397 1594 aa25.47■■□□□ 1.67
PCM1-206ENST00000518537 EFCAB5A4FU69 1503 aa25.47■■□□□ 1.67
PCM1-206ENST00000518537 EIF4G3O43432 1585 aaKnown RBP25.41■■□□□ 1.66
PCM1-206ENST00000518537 P3H3Q8IVL6 736 aa25.41■■□□□ 1.66
PCM1-206ENST00000518537 FHOD3Q2V2M9 1422 aa25.36■■□□□ 1.65
PCM1-206ENST00000518537 KANK4Q5T7N3 995 aaPredicted RBP25.34■■□□□ 1.65
PCM1-206ENST00000518537 SNAPC4Q5SXM2 1469 aa25.33■■□□□ 1.65
PCM1-206ENST00000518537 SAMD9Q5K651 1589 aa25.32■■□□□ 1.64
PCM1-206ENST00000518537 PCF11O94913 1555 aaKnown RBP25.31■■□□□ 1.64
PCM1-206ENST00000518537 MAP3K1Q13233 1512 aa25.3■■□□□ 1.64
PCM1-206ENST00000518537 ZEB1P37275 1124 aaPredicted RBP25.29■■□□□ 1.64
PCM1-206ENST00000518537 TIAM1Q13009 1591 aa25.29■■□□□ 1.64
PCM1-206ENST00000518537 IQGAP2Q13576 1575 aa25.27■■□□□ 1.64
PCM1-206ENST00000518537 FMN1Q68DA7 1419 aa25.25■■□□□ 1.63
PCM1-206ENST00000518537 MAGI1Q96QZ7 1491 aaPredicted RBP25.24■■□□□ 1.63
PCM1-206ENST00000518537 FYCO1Q9BQS8 1478 aa25.24■■□□□ 1.63
PCM1-206ENST00000518537 CASKIN1Q8WXD9 1431 aa25.23■■□□□ 1.63
PCM1-206ENST00000518537 CFAP43Q8NDM7 1665 aa25.22■■□□□ 1.63
PCM1-206ENST00000518537 ATP1B4Q9UN42 357 aaPredicted RBP25.22■■□□□ 1.63
PCM1-206ENST00000518537 GRIN2AQ12879 1464 aa25.21■■□□□ 1.63
PCM1-206ENST00000518537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.17■■□□□ 1.62
PCM1-206ENST00000518537 LRRC9Q6ZRR7 1453 aa25.16■■□□□ 1.62
PCM1-206ENST00000518537 HNRNPUL2Q1KMD3 747 aaKnown RBP25.16■■□□□ 1.62
PCM1-206ENST00000518537 SYNJ2O15056 1496 aa25.16■■□□□ 1.62
PCM1-206ENST00000518537 KIAA0586Q9BVV6 1533 aa25.14■■□□□ 1.62
PCM1-206ENST00000518537 CHMP7Q8WUX9 453 aaPredicted RBP25.14■■□□□ 1.61
PCM1-206ENST00000518537 CCER1Q8TC90 406 aaPredicted RBP25.13■■□□□ 1.61
PCM1-206ENST00000518537 UGGT2Q9NYU1 1516 aa25.12■■□□□ 1.61
PCM1-206ENST00000518537 RRBP1Q9P2E9 1410 aaKnown RBP25.1■■□□□ 1.61
PCM1-206ENST00000518537 FBLN2P98095 1184 aa25.07■■□□□ 1.6
PCM1-206ENST00000518537 CEP170Q5SW79 1584 aa25.05■■□□□ 1.6
PCM1-206ENST00000518537 CCNB3Q8WWL7 1395 aa25.03■■□□□ 1.6
PCM1-206ENST00000518537 LRRIQ1Q96JM4 1722 aa25.02■■□□□ 1.6
PCM1-206ENST00000518537 KIAA0556O60303 1618 aa25■■□□□ 1.59
PCM1-206ENST00000518537 DISP1Q96F81 1524 aa24.98■■□□□ 1.59
PCM1-206ENST00000518537 NUP160Q12769 1436 aa24.98■■□□□ 1.59
PCM1-206ENST00000518537 HECW1Q76N89 1606 aa24.98■■□□□ 1.59
PCM1-206ENST00000518537 PHLDB1Q86UU1 1377 aa24.96■■□□□ 1.59
PCM1-206ENST00000518537 MTUS2Q5JR59 1369 aa24.94■■□□□ 1.58
PCM1-206ENST00000518537 CCDC18Q5T9S5 1454 aa24.94■■□□□ 1.58
PCM1-206ENST00000518537 EHBP1L1Q8N3D4 1523 aa24.87■■□□□ 1.57
PCM1-206ENST00000518537 JPH4Q96JJ6 628 aa24.86■■□□□ 1.57
PCM1-206ENST00000518537 EPRSP07814 1512 aaKnown RBP24.85■■□□□ 1.57
PCM1-206ENST00000518537 CARMIL2Q6F5E8 1435 aa24.85■■□□□ 1.57
PCM1-206ENST00000518537 SUPT6HQ7KZ85 1726 aaKnown RBP24.84■■□□□ 1.57
PCM1-206ENST00000518537 CHD1O14646 1710 aa24.84■■□□□ 1.57
PCM1-206ENST00000518537 ITGAEP38570 1179 aa24.83■■□□□ 1.57
PCM1-206ENST00000518537 FAM50AQ14320 339 aaKnown RBP24.81■■□□□ 1.56
PCM1-206ENST00000518537 RAPGEF6Q8TEU7 1601 aa24.81■■□□□ 1.56
PCM1-206ENST00000518537 CDK13Q14004 1512 aaKnown RBP24.8■■□□□ 1.56
PCM1-206ENST00000518537 NCOA2Q15596 1464 aa24.79■■□□□ 1.56
PCM1-206ENST00000518537 MAGI3Q5TCQ9 1506 aa24.79■■□□□ 1.56
PCM1-206ENST00000518537 FGD6Q6ZV73 1430 aa24.76■■□□□ 1.55
PCM1-206ENST00000518537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.75■■□□□ 1.55
PCM1-206ENST00000518537 ARID3CA6NKF2 412 aa24.74■■□□□ 1.55
PCM1-206ENST00000518537 NUP153P49790 1475 aaKnown RBP24.73■■□□□ 1.55
PCM1-206ENST00000518537 MYOM3Q5VTT5 1437 aa24.72■■□□□ 1.55
PCM1-206ENST00000518537 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
PCM1-206ENST00000518537 PLB1Q6P1J6 1458 aa24.68■■□□□ 1.54
PCM1-206ENST00000518537 PRG4Q92954 1404 aaPredicted RBP24.66■■□□□ 1.54
PCM1-206ENST00000518537 CDK11AQ9UQ88 783 aaPredicted RBP24.64■■□□□ 1.54
PCM1-206ENST00000518537 DHX57Q6P158 1386 aaKnown RBP24.64■■□□□ 1.54
PCM1-206ENST00000518537 SETD5Q9C0A6 1442 aa24.63■■□□□ 1.53
PCM1-206ENST00000518537 PTPN23Q9H3S7 1636 aa24.62■■□□□ 1.53
PCM1-206ENST00000518537 RAB3GAP2Q9H2M9 1393 aa24.61■■□□□ 1.53
PCM1-206ENST00000518537 ABCA8O94911 1581 aa24.61■■□□□ 1.53
PCM1-206ENST00000518537 SHROOM2Q13796 1616 aa24.6■■□□□ 1.53
PCM1-206ENST00000518537 CLSPNQ9HAW4 1339 aa24.59■■□□□ 1.53
PCM1-206ENST00000518537 PTPRGP23470 1445 aa24.56■■□□□ 1.52
PCM1-206ENST00000518537 TCOF1Q13428 1488 aaKnown RBP24.55■■□□□ 1.52
PCM1-206ENST00000518537 MIA2Q96PC5 1412 aa24.54■■□□□ 1.52
PCM1-206ENST00000518537 TROQ12816 1431 aaPredicted RBP24.54■■□□□ 1.52
PCM1-206ENST00000518537 CLASP1Q7Z460 1538 aa24.5■■□□□ 1.51
PCM1-206ENST00000518537 PTPRKQ15262 1439 aa24.48■■□□□ 1.51
PCM1-206ENST00000518537 ATP10BO94823 1461 aa24.47■■□□□ 1.51
PCM1-206ENST00000518537 ADCY10Q96PN6 1610 aa24.47■■□□□ 1.51
PCM1-206ENST00000518537 ERCC6L2Q5T890 1561 aa24.43■■□□□ 1.5
PCM1-206ENST00000518537 PLEKHD1A6NEE1 506 aa24.43■■□□□ 1.5
PCM1-206ENST00000518537 HFM1A2PYH4 1435 aa24.42■■□□□ 1.5
PCM1-206ENST00000518537 KIF14Q15058 1648 aa24.42■■□□□ 1.5
PCM1-206ENST00000518537 ITSN2Q9NZM3 1697 aa24.41■■□□□ 1.5
PCM1-206ENST00000518537 UACAQ9BZF9 1416 aa24.41■■□□□ 1.5
PCM1-206ENST00000518537 NAIPQ13075 1403 aa24.36■■□□□ 1.49
PCM1-206ENST00000518537 MAPKBP1O60336 1514 aa24.35■■□□□ 1.49
PCM1-206ENST00000518537 GPATCH8Q9UKJ3 1502 aaKnown RBP24.34■■□□□ 1.49
PCM1-206ENST00000518537 CHIC2Q9UKJ5 165 aa24.33■■□□□ 1.49
PCM1-206ENST00000518537 CFDP1Q9UEE9 299 aaPredicted RBP24.33■■□□□ 1.48
PCM1-206ENST00000518537 DNMT1P26358 1616 aaKnown RBP24.32■■□□□ 1.48
PCM1-206ENST00000518537 ABCC2Q92887 1545 aa24.32■■□□□ 1.48
PCM1-206ENST00000518537 GCC2Q8IWJ2 1684 aa24.32■■□□□ 1.48
PCM1-206ENST00000518537 ZNF644Q9H582 1327 aaPredicted RBP24.31■■□□□ 1.48
PCM1-206ENST00000518537 DAPK1P53355 1430 aa24.31■■□□□ 1.48
PCM1-206ENST00000518537 AKNAQ7Z591 1439 aa24.31■■□□□ 1.48
PCM1-206ENST00000518537 RRP7BPQ9NSQ0 103 aa24.3■■□□□ 1.48
PCM1-206ENST00000518537 CAMSAP2Q08AD1 1489 aa24.29■■□□□ 1.48
PCM1-206ENST00000518537 ABCC10Q5T3U5 1492 aa24.29■■□□□ 1.48
PCM1-206ENST00000518537 CDC42BPAQ5VT25 1732 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms