RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 EIF4G3O43432 1585 aaKnown RBP36.45■■■■□ 3.42
SLIT3-204ENST00000518140 ADAMTS12P58397 1594 aa36.4■■■■□ 3.42
SLIT3-204ENST00000518140 SNAPC4Q5SXM2 1469 aa36.34■■■■□ 3.41
SLIT3-204ENST00000518140 P3H3Q8IVL6 736 aa36.33■■■■□ 3.41
SLIT3-204ENST00000518140 CTTNBP2Q8WZ74 1663 aa36.33■■■■□ 3.41
SLIT3-204ENST00000518140 APLP2Q06481 763 aa36.22■■■■□ 3.39
SLIT3-204ENST00000518140 FHOD3Q2V2M9 1422 aa36.16■■■■□ 3.38
SLIT3-204ENST00000518140 MAGI1Q96QZ7 1491 aaPredicted RBP36.16■■■■□ 3.38
SLIT3-204ENST00000518140 EFCAB5A4FU69 1503 aa36.12■■■■□ 3.37
SLIT3-204ENST00000518140 GRIN2AQ12879 1464 aa36.11■■■■□ 3.37
SLIT3-204ENST00000518140 CHMP7Q8WUX9 453 aaPredicted RBP36.11■■■■□ 3.37
SLIT3-204ENST00000518140 FBLN2P98095 1184 aa36.09■■■■□ 3.37
SLIT3-204ENST00000518140 SYNJ2O15056 1496 aa36.08■■■■□ 3.37
SLIT3-204ENST00000518140 KANK4Q5T7N3 995 aaPredicted RBP36.06■■■■□ 3.36
SLIT3-204ENST00000518140 IQGAP2Q13576 1575 aa36.02■■■■□ 3.36
SLIT3-204ENST00000518140 SAMD9Q5K651 1589 aa36.02■■■■□ 3.36
SLIT3-204ENST00000518140 KIAA0586Q9BVV6 1533 aa35.96■■■■□ 3.35
SLIT3-204ENST00000518140 ATP1B4Q9UN42 357 aaPredicted RBP35.93■■■■□ 3.34
SLIT3-204ENST00000518140 HRCP23327 699 aa35.92■■■■□ 3.34
SLIT3-204ENST00000518140 PCF11O94913 1555 aaKnown RBP35.92■■■■□ 3.34
SLIT3-204ENST00000518140 CEP170Q5SW79 1584 aa35.91■■■■□ 3.34
SLIT3-204ENST00000518140 FMN1Q68DA7 1419 aa35.87■■■■□ 3.33
SLIT3-204ENST00000518140 UGGT2Q9NYU1 1516 aa35.86■■■■□ 3.33
SLIT3-204ENST00000518140 CASKIN1Q8WXD9 1431 aa35.85■■■■□ 3.33
SLIT3-204ENST00000518140 NUP160Q12769 1436 aa35.83■■■■□ 3.33
SLIT3-204ENST00000518140 TIAM1Q13009 1591 aa35.8■■■■□ 3.32
SLIT3-204ENST00000518140 FYCO1Q9BQS8 1478 aa35.8■■■■□ 3.32
SLIT3-204ENST00000518140 MAP3K1Q13233 1512 aa35.78■■■■□ 3.32
SLIT3-204ENST00000518140 DISP1Q96F81 1524 aa35.76■■■■□ 3.32
SLIT3-204ENST00000518140 JPH4Q96JJ6 628 aa35.71■■■■□ 3.31
SLIT3-204ENST00000518140 LRRC9Q6ZRR7 1453 aa35.69■■■■□ 3.3
SLIT3-204ENST00000518140 KIAA0556O60303 1618 aa35.67■■■■□ 3.3
SLIT3-204ENST00000518140 CFAP43Q8NDM7 1665 aa35.64■■■■□ 3.3
SLIT3-204ENST00000518140 CHD1O14646 1710 aa35.63■■■■□ 3.29
SLIT3-204ENST00000518140 LRRIQ1Q96JM4 1722 aa35.58■■■■□ 3.29
SLIT3-204ENST00000518140 HNRNPUL2Q1KMD3 747 aaKnown RBP35.56■■■■□ 3.28
SLIT3-204ENST00000518140 ARID3CA6NKF2 412 aa35.48■■■■□ 3.27
SLIT3-204ENST00000518140 CARMIL2Q6F5E8 1435 aa35.48■■■■□ 3.27
SLIT3-204ENST00000518140 RRBP1Q9P2E9 1410 aaKnown RBP35.48■■■■□ 3.27
SLIT3-204ENST00000518140 PHLDB1Q86UU1 1377 aa35.47■■■■□ 3.27
SLIT3-204ENST00000518140 HECW1Q76N89 1606 aa35.43■■■■□ 3.26
SLIT3-204ENST00000518140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.42■■■■□ 3.26
SLIT3-204ENST00000518140 MTUS2Q5JR59 1369 aa35.42■■■■□ 3.26
SLIT3-204ENST00000518140 EPRSP07814 1512 aaKnown RBP35.42■■■■□ 3.26
SLIT3-204ENST00000518140 PRG4Q92954 1404 aaPredicted RBP35.41■■■■□ 3.26
SLIT3-204ENST00000518140 CCNB3Q8WWL7 1395 aa35.4■■■■□ 3.26
SLIT3-204ENST00000518140 CDK13Q14004 1512 aaKnown RBP35.38■■■■□ 3.25
SLIT3-204ENST00000518140 CCDC18Q5T9S5 1454 aa35.37■■■■□ 3.25
SLIT3-204ENST00000518140 MAGI3Q5TCQ9 1506 aa35.35■■■■□ 3.25
SLIT3-204ENST00000518140 PLB1Q6P1J6 1458 aa35.35■■■■□ 3.25
SLIT3-204ENST00000518140 NUP153P49790 1475 aaKnown RBP35.34■■■■□ 3.25
SLIT3-204ENST00000518140 RAPGEF6Q8TEU7 1601 aa35.32■■■■□ 3.25
SLIT3-204ENST00000518140 SHROOM2Q13796 1616 aa35.26■■■■□ 3.23
SLIT3-204ENST00000518140 EHBP1L1Q8N3D4 1523 aa35.24■■■■□ 3.23
SLIT3-204ENST00000518140 ITGAEP38570 1179 aa35.23■■■■□ 3.23
SLIT3-204ENST00000518140 NCOA2Q15596 1464 aa35.23■■■■□ 3.23
SLIT3-204ENST00000518140 CCER1Q8TC90 406 aaPredicted RBP35.22■■■■□ 3.23
SLIT3-204ENST00000518140 CLASP1Q7Z460 1538 aa35.22■■■■□ 3.23
SLIT3-204ENST00000518140 PTPRGP23470 1445 aa35.2■■■■□ 3.23
SLIT3-204ENST00000518140 FAM50AQ14320 339 aaKnown RBP35.2■■■■□ 3.23
SLIT3-204ENST00000518140 ERCC6L2Q5T890 1561 aa35.2■■■■□ 3.23
SLIT3-204ENST00000518140 ABCA8O94911 1581 aa35.16■■■■□ 3.22
SLIT3-204ENST00000518140 SUPT6HQ7KZ85 1726 aaKnown RBP35.15■■■■□ 3.22
SLIT3-204ENST00000518140 ARHGEF11O15085 1522 aa35.12■■■■□ 3.21
SLIT3-204ENST00000518140 FGD6Q6ZV73 1430 aa35.11■■■■□ 3.21
SLIT3-204ENST00000518140 ZEB1P37275 1124 aaPredicted RBP35.09■■■■□ 3.21
SLIT3-204ENST00000518140 MYOM3Q5VTT5 1437 aa35.08■■■■□ 3.21
SLIT3-204ENST00000518140 CDK11AQ9UQ88 783 aaPredicted RBP35.06■■■■□ 3.2
SLIT3-204ENST00000518140 ATP10BO94823 1461 aa35.03■■■■□ 3.2
SLIT3-204ENST00000518140 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35■■■■□ 3.19
SLIT3-204ENST00000518140 UACAQ9BZF9 1416 aa34.97■■■■□ 3.19
SLIT3-204ENST00000518140 TROQ12816 1431 aaPredicted RBP34.97■■■■□ 3.19
SLIT3-204ENST00000518140 OSCARQ8IYS5 282 aa34.94■■■■□ 3.18
SLIT3-204ENST00000518140 PLEKHD1A6NEE1 506 aa34.9■■■■□ 3.18
SLIT3-204ENST00000518140 PTPN23Q9H3S7 1636 aa34.88■■■■□ 3.17
SLIT3-204ENST00000518140 PTPRKQ15262 1439 aa34.85■■■■□ 3.17
SLIT3-204ENST00000518140 KIF14Q15058 1648 aa34.83■■■■□ 3.17
SLIT3-204ENST00000518140 MIA2Q96PC5 1412 aa34.81■■■■□ 3.16
SLIT3-204ENST00000518140 TCOF1Q13428 1488 aaKnown RBP34.81■■■■□ 3.16
SLIT3-204ENST00000518140 ABCC2Q92887 1545 aa34.8■■■■□ 3.16
SLIT3-204ENST00000518140 RAB3GAP2Q9H2M9 1393 aa34.8■■■■□ 3.16
SLIT3-204ENST00000518140 SETD5Q9C0A6 1442 aa34.78■■■■□ 3.16
SLIT3-204ENST00000518140 ZNF644Q9H582 1327 aaPredicted RBP34.77■■■■□ 3.16
SLIT3-204ENST00000518140 ADCY10Q96PN6 1610 aa34.75■■■■□ 3.15
SLIT3-204ENST00000518140 DHX57Q6P158 1386 aaKnown RBP34.74■■■■□ 3.15
SLIT3-204ENST00000518140 GPATCH8Q9UKJ3 1502 aaKnown RBP34.73■■■■□ 3.15
SLIT3-204ENST00000518140 CFDP1Q9UEE9 299 aaPredicted RBP34.69■■■■□ 3.14
SLIT3-204ENST00000518140 UHRF1BP1LA0JNW5 1464 aa34.67■■■■□ 3.14
SLIT3-204ENST00000518140 ABCC10Q5T3U5 1492 aa34.67■■■■□ 3.14
SLIT3-204ENST00000518140 CHIC2Q9UKJ5 165 aa34.66■■■■□ 3.14
SLIT3-204ENST00000518140 ZNF777Q9ULD5 760 aaPredicted RBP34.61■■■■□ 3.13
SLIT3-204ENST00000518140 KDM5BQ9UGL1 1544 aa34.59■■■■□ 3.13
SLIT3-204ENST00000518140 HFM1A2PYH4 1435 aa34.57■■■■□ 3.12
SLIT3-204ENST00000518140 ZCCHC11Q5TAX3 1644 aaKnown RBP34.57■■■■□ 3.12
SLIT3-204ENST00000518140 RRP7BPQ9NSQ0 103 aa34.56■■■■□ 3.12
SLIT3-204ENST00000518140 ITSN2Q9NZM3 1697 aa34.56■■■■□ 3.12
SLIT3-204ENST00000518140 KCNH8Q96L42 1107 aa34.55■■■■□ 3.12
SLIT3-204ENST00000518140 NAIPQ13075 1403 aa34.55■■■■□ 3.12
SLIT3-204ENST00000518140 CAMSAP2Q08AD1 1489 aa34.55■■■■□ 3.12
SLIT3-204ENST00000518140 CDC42BPAQ5VT25 1732 aa34.54■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms