RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 NISCHQ9Y2I1 1504 aa52.62■■■■■ 6.01
SLIT3-204ENST00000518140 CCDC180Q9P1Z9 1646 aa45.62■■■■■ 4.89
SLIT3-204ENST00000518140 ZCCHC6Q5VYS8 1495 aaKnown RBP44.19■■■■■ 4.66
SLIT3-204ENST00000518140 DCAF8L2P0C7V8 631 aa43.73■■■■■ 4.59
SLIT3-204ENST00000518140 ABCC9O60706 1549 aa43.39■■■■■ 4.54
SLIT3-204ENST00000518140 DCAF1Q9Y4B6 1507 aa43.35■■■■■ 4.53
SLIT3-204ENST00000518140 SHROOM4Q9ULL8 1493 aa43.29■■■■■ 4.52
SLIT3-204ENST00000518140 MYO15BQ96JP2 1530 aa42.76■■■■■ 4.44
SLIT3-204ENST00000518140 NACADO15069 1562 aa42.54■■■■■ 4.4
SLIT3-204ENST00000518140 SCRIBQ14160 1630 aa42.22■■■■■ 4.35
SLIT3-204ENST00000518140 RB1CC1Q8TDY2 1594 aa42.17■■■■■ 4.34
SLIT3-204ENST00000518140 SUPT5HO00267 1087 aaKnown RBP41.71■■■■■ 4.27
SLIT3-204ENST00000518140 UNC13AQ9UPW8 1703 aa41.38■■■■■ 4.21
SLIT3-204ENST00000518140 PABPN1Q86U42 306 aaKnown RBP eCLIP41.08■■■■■ 4.17
SLIT3-204ENST00000518140 CECR2Q9BXF3 1484 aa41.04■■■■■ 4.16
SLIT3-204ENST00000518140 BICRAQ9NZM4 1560 aa41.03■■■■■ 4.16
SLIT3-204ENST00000518140 RSF1Q96T23 1441 aaPredicted RBP40.95■■■■■ 4.15
SLIT3-204ENST00000518140 MROH2BQ7Z745 1585 aa40.75■■■■■ 4.11
SLIT3-204ENST00000518140 BAZ1AQ9NRL2 1556 aaPredicted RBP40.54■■■■■ 4.08
SLIT3-204ENST00000518140 WIZO95785 1651 aa40.4■■■■■ 4.06
SLIT3-204ENST00000518140 SMARCA4P51532 1647 aa40.39■■■■■ 4.06
SLIT3-204ENST00000518140 CHIC1Q5VXU3 224 aa39.92■■■■□ 3.98
SLIT3-204ENST00000518140 TOP2AP11388 1531 aaKnown RBP39.87■■■■□ 3.97
SLIT3-204ENST00000518140 PEG3Q9GZU2 1588 aa39.82■■■■□ 3.97
SLIT3-204ENST00000518140 ATAD2BQ9ULI0 1458 aa39.77■■■■□ 3.96
SLIT3-204ENST00000518140 EIF4G1Q04637 1599 aaKnown RBP39.74■■■■□ 3.95
SLIT3-204ENST00000518140 SMARCA2P51531 1590 aa39.62■■■■□ 3.93
SLIT3-204ENST00000518140 CCDC88BA6NC98 1476 aa39.6■■■■□ 3.93
SLIT3-204ENST00000518140 BAZ1BQ9UIG0 1483 aaKnown RBP39.52■■■■□ 3.92
SLIT3-204ENST00000518140 NCAPD3P42695 1498 aa39.36■■■■□ 3.89
SLIT3-204ENST00000518140 HMGXB3Q12766 1538 aa39.22■■■■□ 3.87
SLIT3-204ENST00000518140 CC2D2AQ9P2K1 1620 aa39.16■■■■□ 3.86
SLIT3-204ENST00000518140 TRIM41Q8WV44 630 aa39.09■■■■□ 3.85
SLIT3-204ENST00000518140 ABCC8Q09428 1581 aa38.84■■■■□ 3.81
SLIT3-204ENST00000518140 LOC105371045A0A1W2PR82 267 aa38.54■■■■□ 3.76
SLIT3-204ENST00000518140 FAM9AQ8IZU1 332 aaPredicted RBP38.54■■■■□ 3.76
SLIT3-204ENST00000518140 CFTRP13569 1480 aa38.54■■■■□ 3.76
SLIT3-204ENST00000518140 DNAJC5BQ9UF47 199 aa38.51■■■■□ 3.76
SLIT3-204ENST00000518140 WRNQ14191 1432 aaPredicted RBP eCLIP38.5■■■■□ 3.75
SLIT3-204ENST00000518140 CADPSQ9ULU8 1353 aa38.41■■■■□ 3.74
SLIT3-204ENST00000518140 SYNJ1O43426 1573 aa38.35■■■■□ 3.73
SLIT3-204ENST00000518140 SOGA1O94964 1423 aa38.18■■■■□ 3.7
SLIT3-204ENST00000518140 NESP48681 1621 aa38.16■■■■□ 3.7
SLIT3-204ENST00000518140 PRDM2Q13029 1718 aa38.13■■■■□ 3.69
SLIT3-204ENST00000518140 EHMT2Q96KQ7 1210 aa38.11■■■■□ 3.69
SLIT3-204ENST00000518140 TOP2BQ02880 1626 aa38.09■■■■□ 3.69
SLIT3-204ENST00000518140 RUSC2Q8N2Y8 1516 aa38.07■■■■□ 3.69
SLIT3-204ENST00000518140 CUX1P39880 1505 aa38.07■■■■□ 3.68
SLIT3-204ENST00000518140 BIVM-ERCC5R4GMW8 1640 aa38■■■■□ 3.67
SLIT3-204ENST00000518140 FANCD2Q9BXW9 1451 aa37.99■■■■□ 3.67
SLIT3-204ENST00000518140 LAMC3Q9Y6N6 1575 aa37.92■■■■□ 3.66
SLIT3-204ENST00000518140 CSRNP3Q8WYN3 585 aa37.86■■■■□ 3.65
SLIT3-204ENST00000518140 EEA1Q15075 1411 aa37.85■■■■□ 3.65
SLIT3-204ENST00000518140 PDS5BQ9NTI5 1447 aa37.69■■■■□ 3.62
SLIT3-204ENST00000518140 CEP164Q9UPV0 1460 aa37.68■■■■□ 3.62
SLIT3-204ENST00000518140 FGD5Q6ZNL6 1462 aa37.62■■■■□ 3.61
SLIT3-204ENST00000518140 TOPBP1Q92547 1522 aa37.58■■■■□ 3.61
SLIT3-204ENST00000518140 DNMBPQ6XZF7 1577 aa37.58■■■■□ 3.61
SLIT3-204ENST00000518140 KIF21AQ7Z4S6 1674 aa37.54■■■■□ 3.6
SLIT3-204ENST00000518140 URB2Q14146 1524 aaKnown RBP37.54■■■■□ 3.6
SLIT3-204ENST00000518140 KIF27Q86VH2 1401 aa37.48■■■■□ 3.59
SLIT3-204ENST00000518140 UBTFP17480 764 aaKnown RBP37.44■■■■□ 3.58
SLIT3-204ENST00000518140 POLA1P09884 1462 aaPredicted RBP37.42■■■■□ 3.58
SLIT3-204ENST00000518140 GOLGA3Q08378 1498 aa37.42■■■■□ 3.58
SLIT3-204ENST00000518140 CUX2O14529 1486 aa37.42■■■■□ 3.58
SLIT3-204ENST00000518140 RAD54L2Q9Y4B4 1467 aa37.4■■■■□ 3.58
SLIT3-204ENST00000518140 KIF21BO75037 1637 aa37.38■■■■□ 3.57
SLIT3-204ENST00000518140 TNIKQ9UKE5 1360 aa37.38■■■■□ 3.57
SLIT3-204ENST00000518140 RAPGEF2Q9Y4G8 1499 aa37.34■■■■□ 3.57
SLIT3-204ENST00000518140 PRXQ9BXM0 1461 aa37.28■■■■□ 3.56
SLIT3-204ENST00000518140 IGF1RP08069 1367 aa37.25■■■■□ 3.55
SLIT3-204ENST00000518140 CEP162Q5TB80 1403 aa37.23■■■■□ 3.55
SLIT3-204ENST00000518140 ABCA10Q8WWZ4 1543 aa37.22■■■■□ 3.55
SLIT3-204ENST00000518140 MRC2Q9UBG0 1479 aa37.21■■■■□ 3.55
SLIT3-204ENST00000518140 ERICH3Q5RHP9 1530 aa37.11■■■■□ 3.53
SLIT3-204ENST00000518140 ERCC6Q03468 1493 aa37.09■■■■□ 3.53
SLIT3-204ENST00000518140 TDRD9Q8NDG6 1382 aaKnown RBP37.06■■■■□ 3.52
SLIT3-204ENST00000518140 CARMIL1Q5VZK9 1371 aa37.02■■■■□ 3.52
SLIT3-204ENST00000518140 WDR97A6NE52 1622 aa37.02■■■■□ 3.52
SLIT3-204ENST00000518140 WDR62O43379 1518 aa36.98■■■■□ 3.51
SLIT3-204ENST00000518140 TARBP1Q13395 1621 aaKnown RBP36.97■■■■□ 3.51
SLIT3-204ENST00000518140 RANGAP1P46060 587 aaPredicted RBP36.97■■■■□ 3.51
SLIT3-204ENST00000518140 CLIP1P30622 1438 aa36.91■■■■□ 3.5
SLIT3-204ENST00000518140 GAPVD1Q14C86 1478 aa36.88■■■■□ 3.49
SLIT3-204ENST00000518140 ABCA5Q8WWZ7 1642 aa36.88■■■■□ 3.49
SLIT3-204ENST00000518140 THOC2Q8NI27 1593 aaKnown RBP36.85■■■■□ 3.49
SLIT3-204ENST00000518140 PCGF6Q9BYE7 350 aa36.81■■■■□ 3.48
SLIT3-204ENST00000518140 PPARGC1BQ86YN6 1023 aaKnown RBP36.79■■■■□ 3.48
SLIT3-204ENST00000518140 AQRO60306 1485 aaKnown RBP eCLIP36.79■■■■□ 3.48
SLIT3-204ENST00000518140 IFT140Q96RY7 1462 aa36.76■■■■□ 3.47
SLIT3-204ENST00000518140 ZNF608Q9ULD9 1512 aaPredicted RBP36.72■■■■□ 3.47
SLIT3-204ENST00000518140 CUL7Q14999 1698 aa36.71■■■■□ 3.47
SLIT3-204ENST00000518140 TRIM26Q12899 539 aaPredicted RBP36.64■■■■□ 3.46
SLIT3-204ENST00000518140 PBRM1Q86U86 1689 aa36.56■■■■□ 3.44
SLIT3-204ENST00000518140 VPS8Q8N3P4 1428 aa36.55■■■■□ 3.44
SLIT3-204ENST00000518140 ARAP1Q96P48 1450 aa36.54■■■■□ 3.44
SLIT3-204ENST00000518140 GRIN2BQ13224 1484 aa36.54■■■■□ 3.44
SLIT3-204ENST00000518140 ARHGAP35Q9NRY4 1499 aa36.52■■■■□ 3.44
SLIT3-204ENST00000518140 FHAD1B1AJZ9 1412 aa36.45■■■■□ 3.43
SLIT3-204ENST00000518140 TTBK1Q5TCY1 1321 aaPredicted RBP36.45■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms