RNA–Protein interactions for RNA: ENST00000516227.1

RN7SKP288-201, Transcript of RNA, 7SK small nuclear pseudogene 288, humanhuman

BASIC

Gene RN7SKP288, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP288-201ENST00000516227 VPS8Q8N3P4 1428 aa9.28□□□□□ -0.92
RN7SKP288-201ENST00000516227 TTBK1Q5TCY1 1321 aaPredicted RBP9.28□□□□□ -0.92
RN7SKP288-201ENST00000516227 ARAP1Q96P48 1450 aa9.28□□□□□ -0.92
RN7SKP288-201ENST00000516227 ARHGAP35Q9NRY4 1499 aa9.27□□□□□ -0.93
RN7SKP288-201ENST00000516227 LRRIQ1Q96JM4 1722 aa9.26□□□□□ -0.93
RN7SKP288-201ENST00000516227 CFAP43Q8NDM7 1665 aa9.25□□□□□ -0.93
RN7SKP288-201ENST00000516227 EFCAB5A4FU69 1503 aa9.25□□□□□ -0.93
RN7SKP288-201ENST00000516227 IQGAP2Q13576 1575 aa9.24□□□□□ -0.93
RN7SKP288-201ENST00000516227 FHAD1B1AJZ9 1412 aa9.23□□□□□ -0.93
RN7SKP288-201ENST00000516227 SNAPC4Q5SXM2 1469 aa9.23□□□□□ -0.93
RN7SKP288-201ENST00000516227 SAMD9Q5K651 1589 aa9.23□□□□□ -0.93
RN7SKP288-201ENST00000516227 PCF11O94913 1555 aaKnown RBP9.22□□□□□ -0.93
RN7SKP288-201ENST00000516227 P3H3Q8IVL6 736 aa9.21□□□□□ -0.94
RN7SKP288-201ENST00000516227 MAGI1Q96QZ7 1491 aaPredicted RBP9.2□□□□□ -0.94
RN7SKP288-201ENST00000516227 TIAM1Q13009 1591 aa9.18□□□□□ -0.94
RN7SKP288-201ENST00000516227 GRIN2AQ12879 1464 aa9.17□□□□□ -0.94
RN7SKP288-201ENST00000516227 FHOD3Q2V2M9 1422 aa9.17□□□□□ -0.94
RN7SKP288-201ENST00000516227 ATP1B4Q9UN42 357 aaPredicted RBP9.17□□□□□ -0.94
RN7SKP288-201ENST00000516227 CEP170Q5SW79 1584 aa9.16□□□□□ -0.94
RN7SKP288-201ENST00000516227 SYNJ2O15056 1496 aa9.16□□□□□ -0.94
RN7SKP288-201ENST00000516227 FBLN2P98095 1184 aa9.16□□□□□ -0.94
RN7SKP288-201ENST00000516227 CHMP7Q8WUX9 453 aaPredicted RBP9.15□□□□□ -0.94
RN7SKP288-201ENST00000516227 KIAA0556O60303 1618 aa9.14□□□□□ -0.95
RN7SKP288-201ENST00000516227 HECW1Q76N89 1606 aa9.13□□□□□ -0.95
RN7SKP288-201ENST00000516227 UGGT2Q9NYU1 1516 aa9.13□□□□□ -0.95
RN7SKP288-201ENST00000516227 FYCO1Q9BQS8 1478 aa9.13□□□□□ -0.95
RN7SKP288-201ENST00000516227 FMN1Q68DA7 1419 aa9.13□□□□□ -0.95
RN7SKP288-201ENST00000516227 KIAA0586Q9BVV6 1533 aa9.12□□□□□ -0.95
RN7SKP288-201ENST00000516227 SUPT6HQ7KZ85 1726 aaKnown RBP9.12□□□□□ -0.95
RN7SKP288-201ENST00000516227 MAP3K1Q13233 1512 aa9.11□□□□□ -0.95
RN7SKP288-201ENST00000516227 RAPGEF6Q8TEU7 1601 aa9.11□□□□□ -0.95
RN7SKP288-201ENST00000516227 CASKIN1Q8WXD9 1431 aa9.1□□□□□ -0.95
RN7SKP288-201ENST00000516227 KANK4Q5T7N3 995 aaPredicted RBP9.08□□□□□ -0.96
RN7SKP288-201ENST00000516227 HRCP23327 699 aa9.07□□□□□ -0.96
RN7SKP288-201ENST00000516227 LRRC9Q6ZRR7 1453 aa9.07□□□□□ -0.96
RN7SKP288-201ENST00000516227 NUP160Q12769 1436 aa9.05□□□□□ -0.96
RN7SKP288-201ENST00000516227 DISP1Q96F81 1524 aa9.05□□□□□ -0.96
RN7SKP288-201ENST00000516227 CCDC18Q5T9S5 1454 aa9.05□□□□□ -0.96
RN7SKP288-201ENST00000516227 SHROOM2Q13796 1616 aa9.05□□□□□ -0.96
RN7SKP288-201ENST00000516227 HNRNPUL2Q1KMD3 747 aaKnown RBP9.04□□□□□ -0.96
RN7SKP288-201ENST00000516227 EHBP1L1Q8N3D4 1523 aa9.04□□□□□ -0.96
RN7SKP288-201ENST00000516227 CARMIL2Q6F5E8 1435 aa9.04□□□□□ -0.96
RN7SKP288-201ENST00000516227 MTUS2Q5JR59 1369 aa9.01□□□□□ -0.97
RN7SKP288-201ENST00000516227 CDK13Q14004 1512 aaKnown RBP9.01□□□□□ -0.97
RN7SKP288-201ENST00000516227 ITSN2Q9NZM3 1697 aa9.01□□□□□ -0.97
RN7SKP288-201ENST00000516227 EPRSP07814 1512 aaKnown RBP9□□□□□ -0.97
RN7SKP288-201ENST00000516227 JPH4Q96JJ6 628 aa9□□□□□ -0.97
RN7SKP288-201ENST00000516227 RRBP1Q9P2E9 1410 aaKnown RBP8.99□□□□□ -0.97
RN7SKP288-201ENST00000516227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.99□□□□□ -0.97
RN7SKP288-201ENST00000516227 ZEB1P37275 1124 aaPredicted RBP8.99□□□□□ -0.97
RN7SKP288-201ENST00000516227 CCER1Q8TC90 406 aaPredicted RBP8.99□□□□□ -0.97
RN7SKP288-201ENST00000516227 CDC42BPAQ5VT25 1732 aa8.99□□□□□ -0.97
RN7SKP288-201ENST00000516227 PTPN23Q9H3S7 1636 aa8.98□□□□□ -0.97
RN7SKP288-201ENST00000516227 ARID3CA6NKF2 412 aa8.98□□□□□ -0.97
RN7SKP288-201ENST00000516227 MAGI3Q5TCQ9 1506 aa8.98□□□□□ -0.97
RN7SKP288-201ENST00000516227 ADCY10Q96PN6 1610 aa8.98□□□□□ -0.97
RN7SKP288-201ENST00000516227 PRG4Q92954 1404 aaPredicted RBP8.97□□□□□ -0.97
RN7SKP288-201ENST00000516227 CLASP1Q7Z460 1538 aa8.97□□□□□ -0.97
RN7SKP288-201ENST00000516227 ITGAEP38570 1179 aa8.97□□□□□ -0.97
RN7SKP288-201ENST00000516227 ABCA8O94911 1581 aa8.97□□□□□ -0.97
RN7SKP288-201ENST00000516227 CCNB3Q8WWL7 1395 aa8.97□□□□□ -0.97
RN7SKP288-201ENST00000516227 NCOA2Q15596 1464 aa8.96□□□□□ -0.97
RN7SKP288-201ENST00000516227 FAM50AQ14320 339 aaKnown RBP8.96□□□□□ -0.98
RN7SKP288-201ENST00000516227 NUP153P49790 1475 aaKnown RBP8.96□□□□□ -0.98
RN7SKP288-201ENST00000516227 AEBP2Q6ZN18 517 aaPredicted RBP8.95□□□□□ -0.98
RN7SKP288-201ENST00000516227 PHLDB1Q86UU1 1377 aa8.95□□□□□ -0.98
RN7SKP288-201ENST00000516227 PLB1Q6P1J6 1458 aa8.95□□□□□ -0.98
RN7SKP288-201ENST00000516227 ERCC6L2Q5T890 1561 aa8.95□□□□□ -0.98
RN7SKP288-201ENST00000516227 KIF14Q15058 1648 aa8.94□□□□□ -0.98
RN7SKP288-201ENST00000516227 ADGBQ8N7X0 1667 aa8.94□□□□□ -0.98
RN7SKP288-201ENST00000516227 MYO5CQ9NQX4 1742 aa8.94□□□□□ -0.98
RN7SKP288-201ENST00000516227 CDC42BPBQ9Y5S2 1711 aa8.92□□□□□ -0.98
RN7SKP288-201ENST00000516227 GCC2Q8IWJ2 1684 aa8.92□□□□□ -0.98
RN7SKP288-201ENST00000516227 ZCCHC11Q5TAX3 1644 aaKnown RBP8.92□□□□□ -0.98
RN7SKP288-201ENST00000516227 MYOM3Q5VTT5 1437 aa8.92□□□□□ -0.98
RN7SKP288-201ENST00000516227 FGD6Q6ZV73 1430 aa8.92□□□□□ -0.98
RN7SKP288-201ENST00000516227 CDK11AQ9UQ88 783 aaPredicted RBP8.92□□□□□ -0.98
RN7SKP288-201ENST00000516227 CROCC2H7BZ55 1655 aa8.91□□□□□ -0.98
RN7SKP288-201ENST00000516227 PTPRGP23470 1445 aa8.91□□□□□ -0.98
RN7SKP288-201ENST00000516227 ARHGEF11O15085 1522 aa8.9□□□□□ -0.98
RN7SKP288-201ENST00000516227 TROQ12816 1431 aaPredicted RBP8.88□□□□□ -0.99
RN7SKP288-201ENST00000516227 DNMT1P26358 1616 aaKnown RBP8.87□□□□□ -0.99
RN7SKP288-201ENST00000516227 ABCC2Q92887 1545 aa8.87□□□□□ -0.99
RN7SKP288-201ENST00000516227 ATP10BO94823 1461 aa8.87□□□□□ -0.99
RN7SKP288-201ENST00000516227 PREX2Q70Z35 1606 aa8.87□□□□□ -0.99
RN7SKP288-201ENST00000516227 UACAQ9BZF9 1416 aa8.86□□□□□ -0.99
RN7SKP288-201ENST00000516227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.86□□□□□ -0.99
RN7SKP288-201ENST00000516227 PLEKHD1A6NEE1 506 aa8.85□□□□□ -0.99
RN7SKP288-201ENST00000516227 SETD5Q9C0A6 1442 aa8.85□□□□□ -0.99
RN7SKP288-201ENST00000516227 TCOF1Q13428 1488 aaKnown RBP8.84□□□□□ -0.99
RN7SKP288-201ENST00000516227 MIA2Q96PC5 1412 aa8.84□□□□□ -0.99
RN7SKP288-201ENST00000516227 RAB3GAP2Q9H2M9 1393 aa8.83□□□□□ -1
RN7SKP288-201ENST00000516227 OSCARQ8IYS5 282 aa8.82□□□□□ -1
RN7SKP288-201ENST00000516227 CAMSAP2Q08AD1 1489 aa8.82□□□□□ -1
RN7SKP288-201ENST00000516227 TTC37Q6PGP7 1564 aa8.82□□□□□ -1
RN7SKP288-201ENST00000516227 ZNF777Q9ULD5 760 aaPredicted RBP8.8□□□□□ -1
RN7SKP288-201ENST00000516227 DHX57Q6P158 1386 aaKnown RBP8.8□□□□□ -1
RN7SKP288-201ENST00000516227 UHRF1BP1LA0JNW5 1464 aa8.8□□□□□ -1
RN7SKP288-201ENST00000516227 GPATCH8Q9UKJ3 1502 aaKnown RBP8.8□□□□□ -1
RN7SKP288-201ENST00000516227 ABCC10Q5T3U5 1492 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms