RNA–Protein interactions for RNA: ENST00000515877.5

GPN1-210, Transcript of GPN-loop GTPase 1, humanhuman

TSL 5 BASIC

Gene GPN1, Length 1,646 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-210ENST00000515877 RAPGEF2Q9Y4G8 1499 aa13.44□□□□□ -0.26
GPN1-210ENST00000515877 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
GPN1-210ENST00000515877 POLA1P09884 1462 aaPredicted RBP13.44□□□□□ -0.26
GPN1-210ENST00000515877 ABCA10Q8WWZ4 1543 aa13.43□□□□□ -0.26
GPN1-210ENST00000515877 WDR97A6NE52 1622 aa13.43□□□□□ -0.26
GPN1-210ENST00000515877 PRKCSHP14314 528 aaPredicted RBP13.39□□□□□ -0.27
GPN1-210ENST00000515877 FBXO3Q9UK99 471 aa13.39□□□□□ -0.27
GPN1-210ENST00000515877 ATF5Q9Y2D1 282 aaPredicted RBP13.39□□□□□ -0.27
GPN1-210ENST00000515877 MRC2Q9UBG0 1479 aa13.37□□□□□ -0.27
GPN1-210ENST00000515877 TRIM26Q12899 539 aaPredicted RBP13.36□□□□□ -0.27
GPN1-210ENST00000515877 RAD54L2Q9Y4B4 1467 aa13.36□□□□□ -0.27
GPN1-210ENST00000515877 CUL7Q14999 1698 aa13.36□□□□□ -0.27
GPN1-210ENST00000515877 IGF1RP08069 1367 aa13.36□□□□□ -0.27
GPN1-210ENST00000515877 TAOK2Q9UL54 1235 aa13.35□□□□□ -0.27
GPN1-210ENST00000515877 CLIP1P30622 1438 aa13.35□□□□□ -0.27
GPN1-210ENST00000515877 ABCA5Q8WWZ7 1642 aa13.33□□□□□ -0.27
GPN1-210ENST00000515877 PCGF6Q9BYE7 350 aa13.33□□□□□ -0.28
GPN1-210ENST00000515877 TARBP1Q13395 1621 aaKnown RBP13.32□□□□□ -0.28
GPN1-210ENST00000515877 CARMIL1Q5VZK9 1371 aa13.31□□□□□ -0.28
GPN1-210ENST00000515877 WDR62O43379 1518 aa13.3□□□□□ -0.28
GPN1-210ENST00000515877 VSIG10Q8N0Z9 540 aa13.28□□□□□ -0.28
GPN1-210ENST00000515877 VPS8Q8N3P4 1428 aa13.27□□□□□ -0.29
GPN1-210ENST00000515877 GAPVD1Q14C86 1478 aa13.27□□□□□ -0.29
GPN1-210ENST00000515877 PBRM1Q86U86 1689 aa13.25□□□□□ -0.29
GPN1-210ENST00000515877 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
GPN1-210ENST00000515877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
GPN1-210ENST00000515877 HNRNPUL2Q1KMD3 747 aaKnown RBP13.25□□□□□ -0.29
GPN1-210ENST00000515877 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
GPN1-210ENST00000515877 CTTNBP2Q8WZ74 1663 aa13.25□□□□□ -0.29
GPN1-210ENST00000515877 THOC2Q8NI27 1593 aaKnown RBP13.24□□□□□ -0.29
GPN1-210ENST00000515877 IFT140Q96RY7 1462 aa13.23□□□□□ -0.29
GPN1-210ENST00000515877 TDRD9Q8NDG6 1382 aaKnown RBP13.21□□□□□ -0.3
GPN1-210ENST00000515877 ARAP1Q96P48 1450 aa13.2□□□□□ -0.3
GPN1-210ENST00000515877 ARHGAP35Q9NRY4 1499 aa13.18□□□□□ -0.3
GPN1-210ENST00000515877 VASPP50552 380 aaPredicted RBP13.17□□□□□ -0.3
GPN1-210ENST00000515877 EFCAB5A4FU69 1503 aa13.15□□□□□ -0.3
GPN1-210ENST00000515877 GRIN2BQ13224 1484 aa13.15□□□□□ -0.3
GPN1-210ENST00000515877 RANGAP1P46060 587 aaPredicted RBP13.14□□□□□ -0.31
GPN1-210ENST00000515877 APLP2Q06481 763 aa13.14□□□□□ -0.31
GPN1-210ENST00000515877 TPRNQ4KMQ1 711 aa13.14□□□□□ -0.31
GPN1-210ENST00000515877 ADAMTS12P58397 1594 aa13.14□□□□□ -0.31
GPN1-210ENST00000515877 FHAD1B1AJZ9 1412 aa13.13□□□□□ -0.31
GPN1-210ENST00000515877 SPDYE4A6NLX3 237 aa13.13□□□□□ -0.31
GPN1-210ENST00000515877 PPARGC1BQ86YN6 1023 aaKnown RBP13.12□□□□□ -0.31
GPN1-210ENST00000515877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.12□□□□□ -0.319e-6■□□□□ 10.7
GPN1-210ENST00000515877 EIF4G3O43432 1585 aaKnown RBP13.12□□□□□ -0.31
GPN1-210ENST00000515877 AQRO60306 1485 aaKnown RBP eCLIP13.11□□□□□ -0.31
GPN1-210ENST00000515877 HRCP23327 699 aa13.09□□□□□ -0.31
GPN1-210ENST00000515877 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.32
GPN1-210ENST00000515877 MAP3K1Q13233 1512 aa13.07□□□□□ -0.32
GPN1-210ENST00000515877 SAMD9Q5K651 1589 aa13.07□□□□□ -0.32
GPN1-210ENST00000515877 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
GPN1-210ENST00000515877 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
GPN1-210ENST00000515877 MAGI1Q96QZ7 1491 aaPredicted RBP13.04□□□□□ -0.32
GPN1-210ENST00000515877 PKD2Q13563 968 aa13.04□□□□□ -0.32
GPN1-210ENST00000515877 PROM2Q8N271 834 aa13.04□□□□□ -0.32
GPN1-210ENST00000515877 IQGAP2Q13576 1575 aa13.03□□□□□ -0.32
GPN1-210ENST00000515877 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.02□□□□□ -0.32
GPN1-210ENST00000515877 SNAPC4Q5SXM2 1469 aa13.02□□□□□ -0.32
GPN1-210ENST00000515877 CFAP43Q8NDM7 1665 aa13.01□□□□□ -0.33
GPN1-210ENST00000515877 U3KPZ7 1027 aaPredicted RBP13.01□□□□□ -0.33
GPN1-210ENST00000515877 FYCO1Q9BQS8 1478 aa13.01□□□□□ -0.33
GPN1-210ENST00000515877 PCF11O94913 1555 aaKnown RBP13.01□□□□□ -0.33
GPN1-210ENST00000515877 TIAM1Q13009 1591 aa13.01□□□□□ -0.33
GPN1-210ENST00000515877 FMN1Q68DA7 1419 aa13□□□□□ -0.33
GPN1-210ENST00000515877 TTBK1Q5TCY1 1321 aaPredicted RBP12.99□□□□□ -0.33
GPN1-210ENST00000515877 KDM2AQ9Y2K7 1162 aa12.99□□□□□ -0.33
GPN1-210ENST00000515877 GRIN2AQ12879 1464 aa12.99□□□□□ -0.33
GPN1-210ENST00000515877 FHOD3Q2V2M9 1422 aa12.99□□□□□ -0.33
GPN1-210ENST00000515877 DCAF8L1A6NGE4 600 aa12.99□□□□□ -0.33
GPN1-210ENST00000515877 CASKIN1Q8WXD9 1431 aa12.98□□□□□ -0.33
GPN1-210ENST00000515877 SYNJ2O15056 1496 aa12.97□□□□□ -0.33
GPN1-210ENST00000515877 KIAA0586Q9BVV6 1533 aa12.96□□□□□ -0.33
GPN1-210ENST00000515877 UGGT2Q9NYU1 1516 aa12.96□□□□□ -0.33
GPN1-210ENST00000515877 BBXQ8WY36 941 aaPredicted RBP12.96□□□□□ -0.33
GPN1-210ENST00000515877 ZEB1P37275 1124 aaPredicted RBP12.95□□□□□ -0.34
GPN1-210ENST00000515877 P3H3Q8IVL6 736 aa12.94□□□□□ -0.34
GPN1-210ENST00000515877 FBLN2P98095 1184 aa12.93□□□□□ -0.34
GPN1-210ENST00000515877 LRRC9Q6ZRR7 1453 aa12.92□□□□□ -0.34
GPN1-210ENST00000515877 KANK4Q5T7N3 995 aaPredicted RBP12.91□□□□□ -0.34
GPN1-210ENST00000515877 PAXIP1Q6ZW49 1069 aaPredicted RBP12.91□□□□□ -0.34
GPN1-210ENST00000515877 CEP170Q5SW79 1584 aa12.9□□□□□ -0.34
GPN1-210ENST00000515877 CHMP7Q8WUX9 453 aaPredicted RBP12.9□□□□□ -0.34
GPN1-210ENST00000515877 RRBP1Q9P2E9 1410 aaKnown RBP12.9□□□□□ -0.34
GPN1-210ENST00000515877 LRRIQ1Q96JM4 1722 aa12.89□□□□□ -0.35
GPN1-210ENST00000515877 KIAA0556O60303 1618 aa12.89□□□□□ -0.35
GPN1-210ENST00000515877 HECW1Q76N89 1606 aa12.89□□□□□ -0.35
GPN1-210ENST00000515877 NUP160Q12769 1436 aa12.88□□□□□ -0.35
GPN1-210ENST00000515877 CFAP44Q96MT7 982 aa12.88□□□□□ -0.35
GPN1-210ENST00000515877 CCDC18Q5T9S5 1454 aa12.87□□□□□ -0.35
GPN1-210ENST00000515877 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
GPN1-210ENST00000515877 DISP1Q96F81 1524 aa12.85□□□□□ -0.35
GPN1-210ENST00000515877 CHD1O14646 1710 aa12.84□□□□□ -0.35
GPN1-210ENST00000515877 ATP1B4Q9UN42 357 aaPredicted RBP12.84□□□□□ -0.35
GPN1-210ENST00000515877 CCNB3Q8WWL7 1395 aa12.83□□□□□ -0.36
GPN1-210ENST00000515877 EHBP1L1Q8N3D4 1523 aa12.82□□□□□ -0.36
GPN1-210ENST00000515877 SUPT6HQ7KZ85 1726 aaKnown RBP12.81□□□□□ -0.36
GPN1-210ENST00000515877 CARMIL2Q6F5E8 1435 aa12.8□□□□□ -0.36
GPN1-210ENST00000515877 ECM2O94769 699 aaPredicted RBP12.8□□□□□ -0.36
GPN1-210ENST00000515877 NPM1P06748 294 aaKnown RBP eCLIP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms