RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 ADAMTS12P58397 1594 aa21.18■□□□□ 0.98
SPTBN1-205ENST00000496323 APLP2Q06481 763 aa21.16■□□□□ 0.98
SPTBN1-205ENST00000496323 EIF4G3O43432 1585 aaKnown RBP21.16■□□□□ 0.98
SPTBN1-205ENST00000496323 CTTNBP2Q8WZ74 1663 aa21.14■□□□□ 0.97
SPTBN1-205ENST00000496323 P3H3Q8IVL6 736 aa21.13■□□□□ 0.97
SPTBN1-205ENST00000496323 HRCP23327 699 aa21.12■□□□□ 0.97
SPTBN1-205ENST00000496323 SNAPC4Q5SXM2 1469 aa21.12■□□□□ 0.97
SPTBN1-205ENST00000496323 EFCAB5A4FU69 1503 aa21.1■□□□□ 0.97
SPTBN1-205ENST00000496323 FHOD3Q2V2M9 1422 aa21.09■□□□□ 0.97
SPTBN1-205ENST00000496323 KANK4Q5T7N3 995 aaPredicted RBP21.06■□□□□ 0.96
SPTBN1-205ENST00000496323 MAGI1Q96QZ7 1491 aaPredicted RBP21.04■□□□□ 0.96
SPTBN1-205ENST00000496323 SAMD9Q5K651 1589 aa21.02■□□□□ 0.96
SPTBN1-205ENST00000496323 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
SPTBN1-205ENST00000496323 SYNJ2O15056 1496 aa20.98■□□□□ 0.95
SPTBN1-205ENST00000496323 IQGAP2Q13576 1575 aa20.97■□□□□ 0.95
SPTBN1-205ENST00000496323 PCF11O94913 1555 aaKnown RBP20.96■□□□□ 0.95
SPTBN1-205ENST00000496323 MAP3K1Q13233 1512 aa20.96■□□□□ 0.95
SPTBN1-205ENST00000496323 CHMP7Q8WUX9 453 aaPredicted RBP20.96■□□□□ 0.95
SPTBN1-205ENST00000496323 FMN1Q68DA7 1419 aa20.95■□□□□ 0.94
SPTBN1-205ENST00000496323 CASKIN1Q8WXD9 1431 aa20.95■□□□□ 0.94
SPTBN1-205ENST00000496323 KIAA0586Q9BVV6 1533 aa20.95■□□□□ 0.94
SPTBN1-205ENST00000496323 TIAM1Q13009 1591 aa20.93■□□□□ 0.94
SPTBN1-205ENST00000496323 FYCO1Q9BQS8 1478 aa20.92■□□□□ 0.94
SPTBN1-205ENST00000496323 UGGT2Q9NYU1 1516 aa20.9■□□□□ 0.94
SPTBN1-205ENST00000496323 FBLN2P98095 1184 aa20.9■□□□□ 0.94
SPTBN1-205ENST00000496323 ATP1B4Q9UN42 357 aaPredicted RBP20.89■□□□□ 0.93
SPTBN1-205ENST00000496323 LRRC9Q6ZRR7 1453 aa20.87■□□□□ 0.93
SPTBN1-205ENST00000496323 CEP170Q5SW79 1584 aa20.87■□□□□ 0.93
SPTBN1-205ENST00000496323 NUP160Q12769 1436 aa20.86■□□□□ 0.93
SPTBN1-205ENST00000496323 DISP1Q96F81 1524 aa20.83■□□□□ 0.92
SPTBN1-205ENST00000496323 CFAP43Q8NDM7 1665 aa20.82■□□□□ 0.92
SPTBN1-205ENST00000496323 RRBP1Q9P2E9 1410 aaKnown RBP20.8■□□□□ 0.92
SPTBN1-205ENST00000496323 HNRNPUL2Q1KMD3 747 aaKnown RBP20.79■□□□□ 0.92
SPTBN1-205ENST00000496323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.77■□□□□ 0.92
SPTBN1-205ENST00000496323 KIAA0556O60303 1618 aa20.77■□□□□ 0.92
SPTBN1-205ENST00000496323 JPH4Q96JJ6 628 aa20.74■□□□□ 0.91
SPTBN1-205ENST00000496323 PHLDB1Q86UU1 1377 aa20.74■□□□□ 0.91
SPTBN1-205ENST00000496323 CCNB3Q8WWL7 1395 aa20.73■□□□□ 0.91
SPTBN1-205ENST00000496323 ZEB1P37275 1124 aaPredicted RBP20.7■□□□□ 0.9
SPTBN1-205ENST00000496323 LRRIQ1Q96JM4 1722 aa20.7■□□□□ 0.9
SPTBN1-205ENST00000496323 MTUS2Q5JR59 1369 aa20.67■□□□□ 0.9
SPTBN1-205ENST00000496323 CCER1Q8TC90 406 aaPredicted RBP20.67■□□□□ 0.9
SPTBN1-205ENST00000496323 HECW1Q76N89 1606 aa20.66■□□□□ 0.9
SPTBN1-205ENST00000496323 CCDC18Q5T9S5 1454 aa20.66■□□□□ 0.9
SPTBN1-205ENST00000496323 EPRSP07814 1512 aaKnown RBP20.66■□□□□ 0.9
SPTBN1-205ENST00000496323 CARMIL2Q6F5E8 1435 aa20.65■□□□□ 0.9
SPTBN1-205ENST00000496323 MAGI3Q5TCQ9 1506 aa20.63■□□□□ 0.89
SPTBN1-205ENST00000496323 CHD1O14646 1710 aa20.62■□□□□ 0.89
SPTBN1-205ENST00000496323 NUP153P49790 1475 aaKnown RBP20.61■□□□□ 0.89
SPTBN1-205ENST00000496323 CDK13Q14004 1512 aaKnown RBP20.61■□□□□ 0.89
SPTBN1-205ENST00000496323 ARID3CA6NKF2 412 aa20.6■□□□□ 0.89
SPTBN1-205ENST00000496323 EHBP1L1Q8N3D4 1523 aa20.59■□□□□ 0.89
SPTBN1-205ENST00000496323 NCOA2Q15596 1464 aa20.58■□□□□ 0.88
SPTBN1-205ENST00000496323 PRG4Q92954 1404 aaPredicted RBP20.58■□□□□ 0.88
SPTBN1-205ENST00000496323 PLB1Q6P1J6 1458 aa20.57■□□□□ 0.88
SPTBN1-205ENST00000496323 RAPGEF6Q8TEU7 1601 aa20.57■□□□□ 0.88
SPTBN1-205ENST00000496323 ITGAEP38570 1179 aa20.55■□□□□ 0.88
SPTBN1-205ENST00000496323 ARHGEF11O15085 1522 aa20.54■□□□□ 0.88
SPTBN1-205ENST00000496323 FAM50AQ14320 339 aaKnown RBP20.54■□□□□ 0.88
SPTBN1-205ENST00000496323 FGD6Q6ZV73 1430 aa20.53■□□□□ 0.88
SPTBN1-205ENST00000496323 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.52■□□□□ 0.87
SPTBN1-205ENST00000496323 MYOM3Q5VTT5 1437 aa20.5■□□□□ 0.87
SPTBN1-205ENST00000496323 SUPT6HQ7KZ85 1726 aaKnown RBP20.5■□□□□ 0.87
SPTBN1-205ENST00000496323 SHROOM2Q13796 1616 aa20.49■□□□□ 0.87
SPTBN1-205ENST00000496323 ABCA8O94911 1581 aa20.47■□□□□ 0.87
SPTBN1-205ENST00000496323 PTPRGP23470 1445 aa20.46■□□□□ 0.87
SPTBN1-205ENST00000496323 CLASP1Q7Z460 1538 aa20.45■□□□□ 0.86
SPTBN1-205ENST00000496323 CDK11AQ9UQ88 783 aaPredicted RBP20.43■□□□□ 0.86
SPTBN1-205ENST00000496323 ERCC6L2Q5T890 1561 aa20.42■□□□□ 0.86
SPTBN1-205ENST00000496323 TROQ12816 1431 aaPredicted RBP20.4■□□□□ 0.86
SPTBN1-205ENST00000496323 ATP10BO94823 1461 aa20.39■□□□□ 0.86
SPTBN1-205ENST00000496323 DHX57Q6P158 1386 aaKnown RBP20.39■□□□□ 0.85
SPTBN1-205ENST00000496323 RAB3GAP2Q9H2M9 1393 aa20.38■□□□□ 0.85
SPTBN1-205ENST00000496323 PTPRKQ15262 1439 aa20.38■□□□□ 0.85
SPTBN1-205ENST00000496323 SETD5Q9C0A6 1442 aa20.37■□□□□ 0.85
SPTBN1-205ENST00000496323 TCOF1Q13428 1488 aaKnown RBP20.36■□□□□ 0.85
SPTBN1-205ENST00000496323 MIA2Q96PC5 1412 aa20.36■□□□□ 0.85
SPTBN1-205ENST00000496323 PTPN23Q9H3S7 1636 aa20.36■□□□□ 0.85
SPTBN1-205ENST00000496323 UACAQ9BZF9 1416 aa20.34■□□□□ 0.85
SPTBN1-205ENST00000496323 PLEKHD1A6NEE1 506 aa20.31■□□□□ 0.84
SPTBN1-205ENST00000496323 CLSPNQ9HAW4 1339 aa20.28■□□□□ 0.84
SPTBN1-205ENST00000496323 KIF14Q15058 1648 aa20.28■□□□□ 0.84
SPTBN1-205ENST00000496323 ADCY10Q96PN6 1610 aa20.26■□□□□ 0.83
SPTBN1-205ENST00000496323 GPATCH8Q9UKJ3 1502 aaKnown RBP20.26■□□□□ 0.83
SPTBN1-205ENST00000496323 ZNF644Q9H582 1327 aaPredicted RBP20.25■□□□□ 0.83
SPTBN1-205ENST00000496323 HFM1A2PYH4 1435 aa20.25■□□□□ 0.83
SPTBN1-205ENST00000496323 ABCC2Q92887 1545 aa20.25■□□□□ 0.83
SPTBN1-205ENST00000496323 ABCC10Q5T3U5 1492 aa20.22■□□□□ 0.83
SPTBN1-205ENST00000496323 NAIPQ13075 1403 aa20.22■□□□□ 0.83
SPTBN1-205ENST00000496323 OSCARQ8IYS5 282 aa20.21■□□□□ 0.83
SPTBN1-205ENST00000496323 CFDP1Q9UEE9 299 aaPredicted RBP20.21■□□□□ 0.83
SPTBN1-205ENST00000496323 CHIC2Q9UKJ5 165 aa20.19■□□□□ 0.82
SPTBN1-205ENST00000496323 UHRF1BP1LA0JNW5 1464 aa20.19■□□□□ 0.82
SPTBN1-205ENST00000496323 ABCC5O15440 1437 aa20.18■□□□□ 0.82
SPTBN1-205ENST00000496323 MAPKBP1O60336 1514 aa20.17■□□□□ 0.82
SPTBN1-205ENST00000496323 DAPK1P53355 1430 aa20.17■□□□□ 0.82
SPTBN1-205ENST00000496323 RRP7BPQ9NSQ0 103 aa20.16■□□□□ 0.82
SPTBN1-205ENST00000496323 CAMSAP2Q08AD1 1489 aa20.16■□□□□ 0.82
SPTBN1-205ENST00000496323 AKNAQ7Z591 1439 aa20.14■□□□□ 0.82
SPTBN1-205ENST00000496323 ITSN2Q9NZM3 1697 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms