RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 CHMP7Q8WUX9 453 aaPredicted RBP31.46■■■□□ 2.63
LINC01558-202ENST00000495520 GRIN2AQ12879 1464 aa31.42■■■□□ 2.62
LINC01558-202ENST00000495520 VPS8Q8N3P4 1428 aa31.4■■■□□ 2.62
LINC01558-202ENST00000495520 CHD1O14646 1710 aa31.32■■■□□ 2.6
LINC01558-202ENST00000495520 ARAP1Q96P48 1450 aa31.31■■■□□ 2.6
LINC01558-202ENST00000495520 CTTNBP2Q8WZ74 1663 aa31.31■■■□□ 2.6
LINC01558-202ENST00000495520 RANGAP1P46060 587 aaPredicted RBP31.3■■■□□ 2.6
LINC01558-202ENST00000495520 ARHGAP35Q9NRY4 1499 aa31.27■■■□□ 2.6
LINC01558-202ENST00000495520 CEP170Q5SW79 1584 aa31.24■■■□□ 2.59
LINC01558-202ENST00000495520 PPARGC1BQ86YN6 1023 aaKnown RBP31.22■■■□□ 2.59
LINC01558-202ENST00000495520 NUP160Q12769 1436 aa31.2■■■□□ 2.59
LINC01558-202ENST00000495520 KIAA0586Q9BVV6 1533 aa31.15■■■□□ 2.58
LINC01558-202ENST00000495520 IQGAP2Q13576 1575 aa31.15■■■□□ 2.58
LINC01558-202ENST00000495520 EFCAB5A4FU69 1503 aa31.04■■■□□ 2.56
LINC01558-202ENST00000495520 APLP2Q06481 763 aa31■■■□□ 2.55
LINC01558-202ENST00000495520 UGGT2Q9NYU1 1516 aa30.97■■■□□ 2.55
LINC01558-202ENST00000495520 P3H3Q8IVL6 736 aa30.97■■■□□ 2.55
LINC01558-202ENST00000495520 JPH4Q96JJ6 628 aa30.95■■■□□ 2.55
LINC01558-202ENST00000495520 CLASP1Q7Z460 1538 aa30.94■■■□□ 2.54
LINC01558-202ENST00000495520 SAMD9Q5K651 1589 aa30.94■■■□□ 2.54
LINC01558-202ENST00000495520 OSCARQ8IYS5 282 aa30.93■■■□□ 2.54
LINC01558-202ENST00000495520 HRCP23327 699 aa30.91■■■□□ 2.54
LINC01558-202ENST00000495520 FHOD3Q2V2M9 1422 aa30.89■■■□□ 2.54
LINC01558-202ENST00000495520 MAP3K1Q13233 1512 aa30.88■■■□□ 2.53
LINC01558-202ENST00000495520 DISP1Q96F81 1524 aa30.86■■■□□ 2.53
LINC01558-202ENST00000495520 TTBK1Q5TCY1 1321 aaPredicted RBP30.85■■■□□ 2.53
LINC01558-202ENST00000495520 KIAA0556O60303 1618 aa30.85■■■□□ 2.53
LINC01558-202ENST00000495520 SHROOM2Q13796 1616 aa30.84■■■□□ 2.53
LINC01558-202ENST00000495520 PRG4Q92954 1404 aaPredicted RBP30.82■■■□□ 2.52
LINC01558-202ENST00000495520 CARMIL2Q6F5E8 1435 aa30.8■■■□□ 2.52
LINC01558-202ENST00000495520 KANK4Q5T7N3 995 aaPredicted RBP30.78■■■□□ 2.52
LINC01558-202ENST00000495520 FMN1Q68DA7 1419 aa30.76■■■□□ 2.52
LINC01558-202ENST00000495520 CASKIN1Q8WXD9 1431 aa30.76■■■□□ 2.52
LINC01558-202ENST00000495520 FYCO1Q9BQS8 1478 aa30.73■■■□□ 2.51
LINC01558-202ENST00000495520 PCF11O94913 1555 aaKnown RBP30.73■■■□□ 2.51
LINC01558-202ENST00000495520 TIAM1Q13009 1591 aa30.73■■■□□ 2.51
LINC01558-202ENST00000495520 ERCC6L2Q5T890 1561 aa30.7■■■□□ 2.5
LINC01558-202ENST00000495520 CFAP43Q8NDM7 1665 aa30.62■■■□□ 2.49
LINC01558-202ENST00000495520 LRRC9Q6ZRR7 1453 aa30.62■■■□□ 2.49
LINC01558-202ENST00000495520 ATP1B4Q9UN42 357 aaPredicted RBP30.59■■■□□ 2.49
LINC01558-202ENST00000495520 PTPRGP23470 1445 aa30.56■■■□□ 2.48
LINC01558-202ENST00000495520 RRBP1Q9P2E9 1410 aaKnown RBP30.54■■■□□ 2.48
LINC01558-202ENST00000495520 PLB1Q6P1J6 1458 aa30.5■■■□□ 2.47
LINC01558-202ENST00000495520 RAPGEF6Q8TEU7 1601 aa30.48■■■□□ 2.47
LINC01558-202ENST00000495520 HECW1Q76N89 1606 aa30.45■■■□□ 2.47
LINC01558-202ENST00000495520 ZEB1P37275 1124 aaPredicted RBP30.44■■■□□ 2.46
LINC01558-202ENST00000495520 ARHGEF11O15085 1522 aa30.43■■■□□ 2.46
LINC01558-202ENST00000495520 ABCA8O94911 1581 aa30.42■■■□□ 2.46
LINC01558-202ENST00000495520 LRRIQ1Q96JM4 1722 aa30.41■■■□□ 2.46
LINC01558-202ENST00000495520 ARID3CA6NKF2 412 aa30.4■■■□□ 2.46
LINC01558-202ENST00000495520 CCNB3Q8WWL7 1395 aa30.38■■■□□ 2.45
LINC01558-202ENST00000495520 NUP153P49790 1475 aaKnown RBP30.38■■■□□ 2.45
LINC01558-202ENST00000495520 UACAQ9BZF9 1416 aa30.38■■■□□ 2.45
LINC01558-202ENST00000495520 CCDC18Q5T9S5 1454 aa30.37■■■□□ 2.45
LINC01558-202ENST00000495520 EPRSP07814 1512 aaKnown RBP30.34■■■□□ 2.45
LINC01558-202ENST00000495520 PHLDB1Q86UU1 1377 aa30.34■■■□□ 2.45
LINC01558-202ENST00000495520 HNRNPUL2Q1KMD3 747 aaKnown RBP30.33■■■□□ 2.45
LINC01558-202ENST00000495520 RIMBP3CA6NJZ7 1639 aa30.32■■■□□ 2.44
LINC01558-202ENST00000495520 RIMBP3BA6NNM3 1639 aa30.32■■■□□ 2.44
LINC01558-202ENST00000495520 RIMBP3Q9UFD9 1639 aa30.32■■■□□ 2.44
LINC01558-202ENST00000495520 CDK13Q14004 1512 aaKnown RBP30.31■■■□□ 2.44
LINC01558-202ENST00000495520 ABCC2Q92887 1545 aa30.29■■■□□ 2.44
LINC01558-202ENST00000495520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.29■■■□□ 2.44
LINC01558-202ENST00000495520 MTUS2Q5JR59 1369 aa30.27■■■□□ 2.44
LINC01558-202ENST00000495520 EHBP1L1Q8N3D4 1523 aa30.25■■■□□ 2.43
LINC01558-202ENST00000495520 UHRF1BP1LA0JNW5 1464 aa30.23■■■□□ 2.43
LINC01558-202ENST00000495520 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.21■■■□□ 2.43
LINC01558-202ENST00000495520 ATP10BO94823 1461 aa30.21■■■□□ 2.43
LINC01558-202ENST00000495520 CCER1Q8TC90 406 aaPredicted RBP30.2■■■□□ 2.43
LINC01558-202ENST00000495520 MAGI3Q5TCQ9 1506 aa30.2■■■□□ 2.43
LINC01558-202ENST00000495520 ADCY10Q96PN6 1610 aa30.2■■■□□ 2.42
LINC01558-202ENST00000495520 NCOA2Q15596 1464 aa30.16■■■□□ 2.42
LINC01558-202ENST00000495520 CYB5RLQ6IPT4 315 aa30.16■■■□□ 2.42
LINC01558-202ENST00000495520 SUPT6HQ7KZ85 1726 aaKnown RBP30.15■■■□□ 2.42
LINC01558-202ENST00000495520 CDK11AQ9UQ88 783 aaPredicted RBP30.13■■■□□ 2.41
LINC01558-202ENST00000495520 FGD6Q6ZV73 1430 aa30.11■■■□□ 2.41
LINC01558-202ENST00000495520 KDM5BQ9UGL1 1544 aa30.11■■■□□ 2.41
LINC01558-202ENST00000495520 ZCCHC11Q5TAX3 1644 aaKnown RBP30.11■■■□□ 2.41
LINC01558-202ENST00000495520 MYOM3Q5VTT5 1437 aa30.08■■■□□ 2.41
LINC01558-202ENST00000495520 PLEKHD1A6NEE1 506 aa30.05■■■□□ 2.4
LINC01558-202ENST00000495520 TROQ12816 1431 aaPredicted RBP30.03■■■□□ 2.4
LINC01558-202ENST00000495520 NPM1P06748 294 aaKnown RBP eCLIP30.01■■■□□ 2.39
LINC01558-202ENST00000495520 FAM50AQ14320 339 aaKnown RBP30■■■□□ 2.39
LINC01558-202ENST00000495520 TCOF1Q13428 1488 aaKnown RBP29.94■■■□□ 2.38
LINC01558-202ENST00000495520 ITGAEP38570 1179 aa29.93■■■□□ 2.38
LINC01558-202ENST00000495520 KIF14Q15058 1648 aa29.93■■■□□ 2.38
LINC01558-202ENST00000495520 MIA2Q96PC5 1412 aa29.93■■■□□ 2.38
LINC01558-202ENST00000495520 DNAJC5Q9H3Z4 198 aa29.91■■■□□ 2.38
LINC01558-202ENST00000495520 PTPN23Q9H3S7 1636 aa29.89■■■□□ 2.37
LINC01558-202ENST00000495520 ASXL2Q76L83 1435 aa29.88■■■□□ 2.37
LINC01558-202ENST00000495520 SETD5Q9C0A6 1442 aa29.87■■■□□ 2.37
LINC01558-202ENST00000495520 KCNH8Q96L42 1107 aa29.87■■■□□ 2.37
LINC01558-202ENST00000495520 WDR7Q9Y4E6 1490 aa29.87■■■□□ 2.37
LINC01558-202ENST00000495520 DHX57Q6P158 1386 aaKnown RBP29.86■■■□□ 2.37
LINC01558-202ENST00000495520 CLSPNQ9HAW4 1339 aa29.85■■■□□ 2.37
LINC01558-202ENST00000495520 RAB3GAP2Q9H2M9 1393 aa29.83■■■□□ 2.37
LINC01558-202ENST00000495520 PTPRKQ15262 1439 aa29.81■■■□□ 2.36
LINC01558-202ENST00000495520 ABCC10Q5T3U5 1492 aa29.79■■■□□ 2.36
LINC01558-202ENST00000495520 MAPKBP1O60336 1514 aa29.76■■■□□ 2.36
LINC01558-202ENST00000495520 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.76■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms