RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 NISCHQ9Y2I1 1504 aa45.34■■■■■ 4.85
LINC01558-202ENST00000495520 CCDC180Q9P1Z9 1646 aa39.81■■■■□ 3.96
LINC01558-202ENST00000495520 ABCC9O60706 1549 aa38.18■■■■□ 3.7
LINC01558-202ENST00000495520 ZCCHC6Q5VYS8 1495 aaKnown RBP37.97■■■■□ 3.67
LINC01558-202ENST00000495520 DCAF8L2P0C7V8 631 aa37.69■■■■□ 3.62
LINC01558-202ENST00000495520 DCAF1Q9Y4B6 1507 aa37.47■■■■□ 3.59
LINC01558-202ENST00000495520 MYO15BQ96JP2 1530 aa37.23■■■■□ 3.55
LINC01558-202ENST00000495520 NACADO15069 1562 aa37.21■■■■□ 3.55
LINC01558-202ENST00000495520 RB1CC1Q8TDY2 1594 aa37.05■■■■□ 3.52
LINC01558-202ENST00000495520 SHROOM4Q9ULL8 1493 aa36.76■■■■□ 3.48
LINC01558-202ENST00000495520 SCRIBQ14160 1630 aa36.56■■■■□ 3.44
LINC01558-202ENST00000495520 UNC13AQ9UPW8 1703 aa36.26■■■■□ 3.39
LINC01558-202ENST00000495520 BICRAQ9NZM4 1560 aa35.91■■■■□ 3.34
LINC01558-202ENST00000495520 PABPN1Q86U42 306 aaKnown RBP eCLIP35.89■■■■□ 3.34
LINC01558-202ENST00000495520 SUPT5HO00267 1087 aaKnown RBP35.5■■■■□ 3.27
LINC01558-202ENST00000495520 CECR2Q9BXF3 1484 aa35.28■■■■□ 3.24
LINC01558-202ENST00000495520 BAZ1AQ9NRL2 1556 aaPredicted RBP35.07■■■■□ 3.2
LINC01558-202ENST00000495520 RSF1Q96T23 1441 aaPredicted RBP35.05■■■■□ 3.2
LINC01558-202ENST00000495520 MROH2BQ7Z745 1585 aa35.01■■■■□ 3.2
LINC01558-202ENST00000495520 SMARCA4P51532 1647 aa34.99■■■■□ 3.19
LINC01558-202ENST00000495520 EIF4G1Q04637 1599 aaKnown RBP34.9■■■■□ 3.18
LINC01558-202ENST00000495520 WIZO95785 1651 aa34.71■■■■□ 3.15
LINC01558-202ENST00000495520 PEG3Q9GZU2 1588 aa34.56■■■■□ 3.12
LINC01558-202ENST00000495520 ATAD2BQ9ULI0 1458 aa34.54■■■■□ 3.12
LINC01558-202ENST00000495520 CC2D2AQ9P2K1 1620 aa34.53■■■■□ 3.12
LINC01558-202ENST00000495520 SMARCA2P51531 1590 aa34.52■■■■□ 3.12
LINC01558-202ENST00000495520 BAZ1BQ9UIG0 1483 aaKnown RBP34.34■■■■□ 3.09
LINC01558-202ENST00000495520 TOP2AP11388 1531 aaKnown RBP34.33■■■■□ 3.09
LINC01558-202ENST00000495520 NCAPD3P42695 1498 aa34.33■■■■□ 3.09
LINC01558-202ENST00000495520 HMGXB3Q12766 1538 aa34.25■■■■□ 3.07
LINC01558-202ENST00000495520 CHIC1Q5VXU3 224 aa34.24■■■■□ 3.07
LINC01558-202ENST00000495520 DNAJC5BQ9UF47 199 aa34.15■■■■□ 3.06
LINC01558-202ENST00000495520 CCDC88BA6NC98 1476 aa33.97■■■■□ 3.03
LINC01558-202ENST00000495520 CADPSQ9ULU8 1353 aa33.43■■■□□ 2.94
LINC01558-202ENST00000495520 CFTRP13569 1480 aa33.42■■■□□ 2.94
LINC01558-202ENST00000495520 TRIM41Q8WV44 630 aa33.42■■■□□ 2.94
LINC01558-202ENST00000495520 NESP48681 1621 aa33.33■■■□□ 2.93
LINC01558-202ENST00000495520 LAMC3Q9Y6N6 1575 aa33.28■■■□□ 2.92
LINC01558-202ENST00000495520 PRDM2Q13029 1718 aa33.23■■■□□ 2.91
LINC01558-202ENST00000495520 ABCC8Q09428 1581 aa33.11■■■□□ 2.89
LINC01558-202ENST00000495520 FANCD2Q9BXW9 1451 aa33.07■■■□□ 2.88
LINC01558-202ENST00000495520 PDS5BQ9NTI5 1447 aa33.04■■■□□ 2.88
LINC01558-202ENST00000495520 WRNQ14191 1432 aaPredicted RBP eCLIP32.94■■■□□ 2.86
LINC01558-202ENST00000495520 KIF21AQ7Z4S6 1674 aa32.93■■■□□ 2.86
LINC01558-202ENST00000495520 CEP164Q9UPV0 1460 aa32.93■■■□□ 2.86
LINC01558-202ENST00000495520 LOC105371045A0A1W2PR82 267 aa32.88■■■□□ 2.85
LINC01558-202ENST00000495520 SYNJ1O43426 1573 aa32.82■■■□□ 2.84
LINC01558-202ENST00000495520 ERCC6Q03468 1493 aa32.81■■■□□ 2.84
LINC01558-202ENST00000495520 CUX1P39880 1505 aa32.78■■■□□ 2.84
LINC01558-202ENST00000495520 FAM9AQ8IZU1 332 aaPredicted RBP32.74■■■□□ 2.83
LINC01558-202ENST00000495520 TOP2BQ02880 1626 aa32.72■■■□□ 2.83
LINC01558-202ENST00000495520 BIVM-ERCC5R4GMW8 1640 aa32.7■■■□□ 2.83
LINC01558-202ENST00000495520 URB2Q14146 1524 aaKnown RBP32.68■■■□□ 2.82
LINC01558-202ENST00000495520 DNMBPQ6XZF7 1577 aa32.67■■■□□ 2.82
LINC01558-202ENST00000495520 MRC2Q9UBG0 1479 aa32.66■■■□□ 2.82
LINC01558-202ENST00000495520 TOPBP1Q92547 1522 aa32.65■■■□□ 2.82
LINC01558-202ENST00000495520 EEA1Q15075 1411 aa32.63■■■□□ 2.81
LINC01558-202ENST00000495520 SOGA1O94964 1423 aa32.6■■■□□ 2.81
LINC01558-202ENST00000495520 THOC2Q8NI27 1593 aaKnown RBP32.54■■■□□ 2.8
LINC01558-202ENST00000495520 FGD5Q6ZNL6 1462 aa32.52■■■□□ 2.8
LINC01558-202ENST00000495520 WDR62O43379 1518 aa32.5■■■□□ 2.79
LINC01558-202ENST00000495520 RUSC2Q8N2Y8 1516 aa32.47■■■□□ 2.79
LINC01558-202ENST00000495520 POLA1P09884 1462 aaPredicted RBP32.44■■■□□ 2.78
LINC01558-202ENST00000495520 CSRNP3Q8WYN3 585 aa32.42■■■□□ 2.78
LINC01558-202ENST00000495520 RAD54L2Q9Y4B4 1467 aa32.34■■■□□ 2.77
LINC01558-202ENST00000495520 CUX2O14529 1486 aa32.25■■■□□ 2.75
LINC01558-202ENST00000495520 ABCA10Q8WWZ4 1543 aa32.2■■■□□ 2.75
LINC01558-202ENST00000495520 TARBP1Q13395 1621 aaKnown RBP32.19■■■□□ 2.74
LINC01558-202ENST00000495520 EHMT2Q96KQ7 1210 aa32.18■■■□□ 2.74
LINC01558-202ENST00000495520 IFT140Q96RY7 1462 aa32.16■■■□□ 2.74
LINC01558-202ENST00000495520 WDR97A6NE52 1622 aa32.16■■■□□ 2.74
LINC01558-202ENST00000495520 KIF21BO75037 1637 aa32.16■■■□□ 2.74
LINC01558-202ENST00000495520 KIF27Q86VH2 1401 aa32.15■■■□□ 2.74
LINC01558-202ENST00000495520 TNIKQ9UKE5 1360 aa32.14■■■□□ 2.74
LINC01558-202ENST00000495520 GOLGA3Q08378 1498 aa32.14■■■□□ 2.73
LINC01558-202ENST00000495520 TDRD9Q8NDG6 1382 aaKnown RBP32.08■■■□□ 2.73
LINC01558-202ENST00000495520 ZNF608Q9ULD9 1512 aaPredicted RBP32.01■■■□□ 2.72
LINC01558-202ENST00000495520 ABCA5Q8WWZ7 1642 aa32■■■□□ 2.71
LINC01558-202ENST00000495520 PRXQ9BXM0 1461 aa31.99■■■□□ 2.71
LINC01558-202ENST00000495520 GAPVD1Q14C86 1478 aa31.97■■■□□ 2.71
LINC01558-202ENST00000495520 AQRO60306 1485 aaKnown RBP eCLIP31.96■■■□□ 2.71
LINC01558-202ENST00000495520 RAPGEF2Q9Y4G8 1499 aa31.93■■■□□ 2.7
LINC01558-202ENST00000495520 UBTFP17480 764 aaKnown RBP31.92■■■□□ 2.7
LINC01558-202ENST00000495520 CEP162Q5TB80 1403 aa31.92■■■□□ 2.7
LINC01558-202ENST00000495520 ERICH3Q5RHP9 1530 aa31.92■■■□□ 2.7
LINC01558-202ENST00000495520 EIF4G3O43432 1585 aaKnown RBP31.91■■■□□ 2.7
LINC01558-202ENST00000495520 IGF1RP08069 1367 aa31.9■■■□□ 2.7
LINC01558-202ENST00000495520 PBRM1Q86U86 1689 aa31.84■■■□□ 2.69
LINC01558-202ENST00000495520 GRIN2BQ13224 1484 aa31.81■■■□□ 2.68
LINC01558-202ENST00000495520 CARMIL1Q5VZK9 1371 aa31.75■■■□□ 2.67
LINC01558-202ENST00000495520 CUL7Q14999 1698 aa31.73■■■□□ 2.67
LINC01558-202ENST00000495520 SNAPC4Q5SXM2 1469 aa31.68■■■□□ 2.66
LINC01558-202ENST00000495520 ADAMTS12P58397 1594 aa31.64■■■□□ 2.65
LINC01558-202ENST00000495520 CLIP1P30622 1438 aa31.62■■■□□ 2.65
LINC01558-202ENST00000495520 FHAD1B1AJZ9 1412 aa31.61■■■□□ 2.65
LINC01558-202ENST00000495520 MAGI1Q96QZ7 1491 aaPredicted RBP31.6■■■□□ 2.65
LINC01558-202ENST00000495520 TRIM26Q12899 539 aaPredicted RBP31.57■■■□□ 2.65
LINC01558-202ENST00000495520 PCGF6Q9BYE7 350 aa31.55■■■□□ 2.64
LINC01558-202ENST00000495520 SYNJ2O15056 1496 aa31.48■■■□□ 2.63
LINC01558-202ENST00000495520 FBLN2P98095 1184 aa31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms