RNA–Protein interactions for RNA: ENST00000495368.1

SEC61A2-214, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 2

Gene SEC61A2, Length 2,311 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-214ENST00000495368 GRIN2BQ13224 1484 aa24.92■■□□□ 1.58
SEC61A2-214ENST00000495368 CTTNBP2Q8WZ74 1663 aa24.9■■□□□ 1.58
SEC61A2-214ENST00000495368 FHAD1B1AJZ9 1412 aa24.87■■□□□ 1.57
SEC61A2-214ENST00000495368 EIF4G3O43432 1585 aaKnown RBP24.87■■□□□ 1.57
SEC61A2-214ENST00000495368 ADAMTS12P58397 1594 aa24.86■■□□□ 1.57
SEC61A2-214ENST00000495368 HRCP23327 699 aa24.86■■□□□ 1.57
SEC61A2-214ENST00000495368 FHOD3Q2V2M9 1422 aa24.81■■□□□ 1.56
SEC61A2-214ENST00000495368 SNAPC4Q5SXM2 1469 aa24.81■■□□□ 1.56
SEC61A2-214ENST00000495368 KANK4Q5T7N3 995 aaPredicted RBP24.78■■□□□ 1.56
SEC61A2-214ENST00000495368 EFCAB5A4FU69 1503 aa24.73■■□□□ 1.55
SEC61A2-214ENST00000495368 ATP1B4Q9UN42 357 aaPredicted RBP24.73■■□□□ 1.55
SEC61A2-214ENST00000495368 FBLN2P98095 1184 aa24.68■■□□□ 1.54
SEC61A2-214ENST00000495368 PCF11O94913 1555 aaKnown RBP24.67■■□□□ 1.54
SEC61A2-214ENST00000495368 SAMD9Q5K651 1589 aa24.65■■□□□ 1.54
SEC61A2-214ENST00000495368 GRIN2AQ12879 1464 aa24.64■■□□□ 1.54
SEC61A2-214ENST00000495368 CHMP7Q8WUX9 453 aaPredicted RBP24.64■■□□□ 1.54
SEC61A2-214ENST00000495368 IQGAP2Q13576 1575 aa24.64■■□□□ 1.53
SEC61A2-214ENST00000495368 MAGI1Q96QZ7 1491 aaPredicted RBP24.64■■□□□ 1.53
SEC61A2-214ENST00000495368 TIAM1Q13009 1591 aa24.59■■□□□ 1.53
SEC61A2-214ENST00000495368 SYNJ2O15056 1496 aa24.59■■□□□ 1.53
SEC61A2-214ENST00000495368 HNRNPUL2Q1KMD3 747 aaKnown RBP24.57■■□□□ 1.52
SEC61A2-214ENST00000495368 FMN1Q68DA7 1419 aa24.56■■□□□ 1.52
SEC61A2-214ENST00000495368 CASKIN1Q8WXD9 1431 aa24.55■■□□□ 1.52
SEC61A2-214ENST00000495368 FYCO1Q9BQS8 1478 aa24.54■■□□□ 1.52
SEC61A2-214ENST00000495368 KIAA0586Q9BVV6 1533 aa24.54■■□□□ 1.52
SEC61A2-214ENST00000495368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.53■■□□□ 1.52
SEC61A2-214ENST00000495368 CEP170Q5SW79 1584 aa24.51■■□□□ 1.51
SEC61A2-214ENST00000495368 MAP3K1Q13233 1512 aa24.51■■□□□ 1.51
SEC61A2-214ENST00000495368 LRRC9Q6ZRR7 1453 aa24.49■■□□□ 1.51
SEC61A2-214ENST00000495368 UGGT2Q9NYU1 1516 aa24.48■■□□□ 1.51
SEC61A2-214ENST00000495368 CFAP43Q8NDM7 1665 aa24.48■■□□□ 1.51
SEC61A2-214ENST00000495368 DISP1Q96F81 1524 aa24.42■■□□□ 1.5
SEC61A2-214ENST00000495368 NUP160Q12769 1436 aa24.41■■□□□ 1.5
SEC61A2-214ENST00000495368 LRRIQ1Q96JM4 1722 aa24.41■■□□□ 1.5
SEC61A2-214ENST00000495368 CCER1Q8TC90 406 aaPredicted RBP24.4■■□□□ 1.5
SEC61A2-214ENST00000495368 KIAA0556O60303 1618 aa24.39■■□□□ 1.49
SEC61A2-214ENST00000495368 ARID3CA6NKF2 412 aa24.38■■□□□ 1.49
SEC61A2-214ENST00000495368 RRBP1Q9P2E9 1410 aaKnown RBP24.37■■□□□ 1.49
SEC61A2-214ENST00000495368 PHLDB1Q86UU1 1377 aa24.36■■□□□ 1.49
SEC61A2-214ENST00000495368 JPH4Q96JJ6 628 aa24.35■■□□□ 1.49
SEC61A2-214ENST00000495368 CCNB3Q8WWL7 1395 aa24.34■■□□□ 1.49
SEC61A2-214ENST00000495368 ZEB1P37275 1124 aaPredicted RBP24.32■■□□□ 1.48
SEC61A2-214ENST00000495368 ITGAEP38570 1179 aa24.32■■□□□ 1.48
SEC61A2-214ENST00000495368 CHD1O14646 1710 aa24.32■■□□□ 1.48
SEC61A2-214ENST00000495368 MTUS2Q5JR59 1369 aa24.31■■□□□ 1.48
SEC61A2-214ENST00000495368 HECW1Q76N89 1606 aa24.28■■□□□ 1.48
SEC61A2-214ENST00000495368 CDK13Q14004 1512 aaKnown RBP24.27■■□□□ 1.48
SEC61A2-214ENST00000495368 EPRSP07814 1512 aaKnown RBP24.24■■□□□ 1.47
SEC61A2-214ENST00000495368 FAM50AQ14320 339 aaKnown RBP24.24■■□□□ 1.47
SEC61A2-214ENST00000495368 MAGI3Q5TCQ9 1506 aa24.24■■□□□ 1.47
SEC61A2-214ENST00000495368 CARMIL2Q6F5E8 1435 aa24.23■■□□□ 1.47
SEC61A2-214ENST00000495368 CCDC18Q5T9S5 1454 aa24.22■■□□□ 1.47
SEC61A2-214ENST00000495368 RAPGEF6Q8TEU7 1601 aa24.18■■□□□ 1.46
SEC61A2-214ENST00000495368 PLB1Q6P1J6 1458 aa24.18■■□□□ 1.46
SEC61A2-214ENST00000495368 NUP153P49790 1475 aaKnown RBP24.17■■□□□ 1.46
SEC61A2-214ENST00000495368 NCOA2Q15596 1464 aa24.17■■□□□ 1.46
SEC61A2-214ENST00000495368 EHBP1L1Q8N3D4 1523 aa24.17■■□□□ 1.46
SEC61A2-214ENST00000495368 PRG4Q92954 1404 aaPredicted RBP24.17■■□□□ 1.46
SEC61A2-214ENST00000495368 SUPT6HQ7KZ85 1726 aaKnown RBP24.13■■□□□ 1.45
SEC61A2-214ENST00000495368 FGD6Q6ZV73 1430 aa24.11■■□□□ 1.45
SEC61A2-214ENST00000495368 MYOM3Q5VTT5 1437 aa24.06■■□□□ 1.44
SEC61A2-214ENST00000495368 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
SEC61A2-214ENST00000495368 PTPRGP23470 1445 aa24.03■■□□□ 1.44
SEC61A2-214ENST00000495368 ERCC6L2Q5T890 1561 aa24.03■■□□□ 1.44
SEC61A2-214ENST00000495368 SHROOM2Q13796 1616 aa24.01■■□□□ 1.43
SEC61A2-214ENST00000495368 ABCA8O94911 1581 aa24.01■■□□□ 1.43
SEC61A2-214ENST00000495368 CDK11AQ9UQ88 783 aaPredicted RBP23.99■■□□□ 1.43
SEC61A2-214ENST00000495368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.97■■□□□ 1.43
SEC61A2-214ENST00000495368 CLASP1Q7Z460 1538 aa23.97■■□□□ 1.43
SEC61A2-214ENST00000495368 RAB3GAP2Q9H2M9 1393 aa23.96■■□□□ 1.43
SEC61A2-214ENST00000495368 PTPN23Q9H3S7 1636 aa23.95■■□□□ 1.43
SEC61A2-214ENST00000495368 DHX57Q6P158 1386 aaKnown RBP23.95■■□□□ 1.42
SEC61A2-214ENST00000495368 ATP10BO94823 1461 aa23.93■■□□□ 1.42
SEC61A2-214ENST00000495368 PTPRKQ15262 1439 aa23.92■■□□□ 1.42
SEC61A2-214ENST00000495368 SETD5Q9C0A6 1442 aa23.92■■□□□ 1.42
SEC61A2-214ENST00000495368 TROQ12816 1431 aaPredicted RBP23.92■■□□□ 1.42
SEC61A2-214ENST00000495368 KIF14Q15058 1648 aa23.87■■□□□ 1.41
SEC61A2-214ENST00000495368 PLEKHD1A6NEE1 506 aa23.87■■□□□ 1.41
SEC61A2-214ENST00000495368 UACAQ9BZF9 1416 aa23.86■■□□□ 1.41
SEC61A2-214ENST00000495368 TCOF1Q13428 1488 aaKnown RBP23.85■■□□□ 1.41
SEC61A2-214ENST00000495368 ZNF644Q9H582 1327 aaPredicted RBP23.84■■□□□ 1.41
SEC61A2-214ENST00000495368 CHIC2Q9UKJ5 165 aa23.84■■□□□ 1.41
SEC61A2-214ENST00000495368 MIA2Q96PC5 1412 aa23.84■■□□□ 1.41
SEC61A2-214ENST00000495368 ADCY10Q96PN6 1610 aa23.78■■□□□ 1.4
SEC61A2-214ENST00000495368 RRP7BPQ9NSQ0 103 aa23.77■■□□□ 1.4
SEC61A2-214ENST00000495368 CFDP1Q9UEE9 299 aaPredicted RBP23.77■■□□□ 1.4
SEC61A2-214ENST00000495368 ZNF777Q9ULD5 760 aaPredicted RBP23.77■■□□□ 1.4
SEC61A2-214ENST00000495368 GPATCH8Q9UKJ3 1502 aaKnown RBP23.76■■□□□ 1.39
SEC61A2-214ENST00000495368 ABCC2Q92887 1545 aa23.75■■□□□ 1.39
SEC61A2-214ENST00000495368 HFM1A2PYH4 1435 aa23.73■■□□□ 1.39
SEC61A2-214ENST00000495368 NAIPQ13075 1403 aa23.72■■□□□ 1.39
SEC61A2-214ENST00000495368 OSCARQ8IYS5 282 aa23.72■■□□□ 1.39
SEC61A2-214ENST00000495368 CLSPNQ9HAW4 1339 aa23.72■■□□□ 1.39
SEC61A2-214ENST00000495368 ABCC10Q5T3U5 1492 aa23.7■■□□□ 1.38
SEC61A2-214ENST00000495368 ITSN2Q9NZM3 1697 aa23.7■■□□□ 1.38
SEC61A2-214ENST00000495368 CAMSAP2Q08AD1 1489 aa23.69■■□□□ 1.38
SEC61A2-214ENST00000495368 MAPKBP1O60336 1514 aa23.68■■□□□ 1.38
SEC61A2-214ENST00000495368 DAPK1P53355 1430 aa23.68■■□□□ 1.38
SEC61A2-214ENST00000495368 ABCC5O15440 1437 aa23.67■■□□□ 1.38
SEC61A2-214ENST00000495368 CDC42BPAQ5VT25 1732 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms