RNA–Protein interactions for RNA: ENST00000495368.1

SEC61A2-214, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 2

Gene SEC61A2, Length 2,311 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-214ENST00000495368 NISCHQ9Y2I1 1504 aa35.95■■■■□ 3.34
SEC61A2-214ENST00000495368 CCDC180Q9P1Z9 1646 aa31.1■■■□□ 2.57
SEC61A2-214ENST00000495368 ZCCHC6Q5VYS8 1495 aaKnown RBP30.21■■■□□ 2.43
SEC61A2-214ENST00000495368 DCAF8L2P0C7V8 631 aa29.98■■■□□ 2.39
SEC61A2-214ENST00000495368 SHROOM4Q9ULL8 1493 aa29.81■■■□□ 2.36
SEC61A2-214ENST00000495368 ABCC9O60706 1549 aa29.57■■■□□ 2.32
SEC61A2-214ENST00000495368 DCAF1Q9Y4B6 1507 aa29.54■■■□□ 2.32
SEC61A2-214ENST00000495368 MYO15BQ96JP2 1530 aa29.07■■■□□ 2.24
SEC61A2-214ENST00000495368 NACADO15069 1562 aa28.97■■■□□ 2.23
SEC61A2-214ENST00000495368 SCRIBQ14160 1630 aa28.9■■■□□ 2.22
SEC61A2-214ENST00000495368 SUPT5HO00267 1087 aaKnown RBP28.75■■■□□ 2.19
SEC61A2-214ENST00000495368 RB1CC1Q8TDY2 1594 aa28.72■■■□□ 2.19
SEC61A2-214ENST00000495368 UNC13AQ9UPW8 1703 aa28.22■■■□□ 2.11
SEC61A2-214ENST00000495368 CECR2Q9BXF3 1484 aa28.07■■■□□ 2.08
SEC61A2-214ENST00000495368 PABPN1Q86U42 306 aaKnown RBP eCLIP28.03■■■□□ 2.08
SEC61A2-214ENST00000495368 RSF1Q96T23 1441 aaPredicted RBP28.03■■■□□ 2.08
SEC61A2-214ENST00000495368 BICRAQ9NZM4 1560 aa27.93■■■□□ 2.06
SEC61A2-214ENST00000495368 MROH2BQ7Z745 1585 aa27.88■■■□□ 2.05
SEC61A2-214ENST00000495368 BAZ1AQ9NRL2 1556 aaPredicted RBP27.7■■■□□ 2.02
SEC61A2-214ENST00000495368 WIZO95785 1651 aa27.68■■■□□ 2.02
SEC61A2-214ENST00000495368 SMARCA4P51532 1647 aa27.59■■■□□ 2.01
SEC61A2-214ENST00000495368 CHIC1Q5VXU3 224 aa27.5■■□□□ 1.99
SEC61A2-214ENST00000495368 TOP2AP11388 1531 aaKnown RBP27.27■■□□□ 1.96
SEC61A2-214ENST00000495368 PEG3Q9GZU2 1588 aa27.12■■□□□ 1.93
SEC61A2-214ENST00000495368 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
SEC61A2-214ENST00000495368 CCDC88BA6NC98 1476 aa27.09■■□□□ 1.93
SEC61A2-214ENST00000495368 SMARCA2P51531 1590 aa27.07■■□□□ 1.92
SEC61A2-214ENST00000495368 EIF4G1Q04637 1599 aaKnown RBP27.06■■□□□ 1.92
SEC61A2-214ENST00000495368 BAZ1BQ9UIG0 1483 aaKnown RBP26.99■■□□□ 1.91
SEC61A2-214ENST00000495368 TRIM41Q8WV44 630 aa26.88■■□□□ 1.89
SEC61A2-214ENST00000495368 NCAPD3P42695 1498 aa26.78■■□□□ 1.88
SEC61A2-214ENST00000495368 HMGXB3Q12766 1538 aa26.72■■□□□ 1.87
SEC61A2-214ENST00000495368 ABCC8Q09428 1581 aa26.67■■□□□ 1.86
SEC61A2-214ENST00000495368 CC2D2AQ9P2K1 1620 aa26.65■■□□□ 1.86
SEC61A2-214ENST00000495368 LOC105371045A0A1W2PR82 267 aa26.6■■□□□ 1.85
SEC61A2-214ENST00000495368 FAM9AQ8IZU1 332 aaPredicted RBP26.6■■□□□ 1.85
SEC61A2-214ENST00000495368 EHMT2Q96KQ7 1210 aa26.36■■□□□ 1.81
SEC61A2-214ENST00000495368 WRNQ14191 1432 aaPredicted RBP eCLIP26.36■■□□□ 1.81
SEC61A2-214ENST00000495368 SYNJ1O43426 1573 aa26.28■■□□□ 1.8
SEC61A2-214ENST00000495368 CFTRP13569 1480 aa26.27■■□□□ 1.8
SEC61A2-214ENST00000495368 SOGA1O94964 1423 aa26.21■■□□□ 1.79
SEC61A2-214ENST00000495368 DNAJC5BQ9UF47 199 aa26.19■■□□□ 1.78
SEC61A2-214ENST00000495368 CADPSQ9ULU8 1353 aa26.17■■□□□ 1.78
SEC61A2-214ENST00000495368 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.77
SEC61A2-214ENST00000495368 TOP2BQ02880 1626 aa26.06■■□□□ 1.76
SEC61A2-214ENST00000495368 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
SEC61A2-214ENST00000495368 NESP48681 1621 aa26.04■■□□□ 1.76
SEC61A2-214ENST00000495368 CUX1P39880 1505 aa26.03■■□□□ 1.76
SEC61A2-214ENST00000495368 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
SEC61A2-214ENST00000495368 CSRNP3Q8WYN3 585 aa25.97■■□□□ 1.75
SEC61A2-214ENST00000495368 EEA1Q15075 1411 aa25.94■■□□□ 1.74
SEC61A2-214ENST00000495368 FANCD2Q9BXW9 1451 aa25.92■■□□□ 1.74
SEC61A2-214ENST00000495368 LAMC3Q9Y6N6 1575 aa25.81■■□□□ 1.72
SEC61A2-214ENST00000495368 UBTFP17480 764 aaKnown RBP25.76■■□□□ 1.71
SEC61A2-214ENST00000495368 FGD5Q6ZNL6 1462 aa25.72■■□□□ 1.71
SEC61A2-214ENST00000495368 GOLGA3Q08378 1498 aa25.71■■□□□ 1.71
SEC61A2-214ENST00000495368 CEP164Q9UPV0 1460 aa25.71■■□□□ 1.71
SEC61A2-214ENST00000495368 TNIKQ9UKE5 1360 aa25.66■■□□□ 1.7
SEC61A2-214ENST00000495368 PDS5BQ9NTI5 1447 aa25.66■■□□□ 1.7
SEC61A2-214ENST00000495368 KIF21BO75037 1637 aa25.65■■□□□ 1.7
SEC61A2-214ENST00000495368 TOPBP1Q92547 1522 aa25.65■■□□□ 1.7
SEC61A2-214ENST00000495368 KIF27Q86VH2 1401 aa25.65■■□□□ 1.7
SEC61A2-214ENST00000495368 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
SEC61A2-214ENST00000495368 RAPGEF2Q9Y4G8 1499 aa25.62■■□□□ 1.69
SEC61A2-214ENST00000495368 KIF21AQ7Z4S6 1674 aa25.62■■□□□ 1.69
SEC61A2-214ENST00000495368 CUX2O14529 1486 aa25.62■■□□□ 1.69
SEC61A2-214ENST00000495368 CEP162Q5TB80 1403 aa25.61■■□□□ 1.69
SEC61A2-214ENST00000495368 URB2Q14146 1524 aaKnown RBP25.61■■□□□ 1.69
SEC61A2-214ENST00000495368 RAD54L2Q9Y4B4 1467 aa25.57■■□□□ 1.68
SEC61A2-214ENST00000495368 PCGF6Q9BYE7 350 aa25.55■■□□□ 1.68
SEC61A2-214ENST00000495368 POLA1P09884 1462 aaPredicted RBP25.55■■□□□ 1.68
SEC61A2-214ENST00000495368 PRXQ9BXM0 1461 aa25.51■■□□□ 1.67
SEC61A2-214ENST00000495368 RANGAP1P46060 587 aaPredicted RBP25.48■■□□□ 1.67
SEC61A2-214ENST00000495368 PPARGC1BQ86YN6 1023 aaKnown RBP25.47■■□□□ 1.67
SEC61A2-214ENST00000495368 IGF1RP08069 1367 aa25.45■■□□□ 1.66
SEC61A2-214ENST00000495368 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
SEC61A2-214ENST00000495368 ABCA10Q8WWZ4 1543 aa25.4■■□□□ 1.66
SEC61A2-214ENST00000495368 CLIP1P30622 1438 aa25.36■■□□□ 1.65
SEC61A2-214ENST00000495368 TRIM26Q12899 539 aaPredicted RBP25.35■■□□□ 1.65
SEC61A2-214ENST00000495368 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
SEC61A2-214ENST00000495368 CARMIL1Q5VZK9 1371 aa25.33■■□□□ 1.65
SEC61A2-214ENST00000495368 TDRD9Q8NDG6 1382 aaKnown RBP25.32■■□□□ 1.64
SEC61A2-214ENST00000495368 WDR97A6NE52 1622 aa25.29■■□□□ 1.64
SEC61A2-214ENST00000495368 ERCC6Q03468 1493 aa25.27■■□□□ 1.64
SEC61A2-214ENST00000495368 TTBK1Q5TCY1 1321 aaPredicted RBP25.24■■□□□ 1.63
SEC61A2-214ENST00000495368 TARBP1Q13395 1621 aaKnown RBP25.21■■□□□ 1.63
SEC61A2-214ENST00000495368 ABCA5Q8WWZ7 1642 aa25.19■■□□□ 1.62
SEC61A2-214ENST00000495368 GAPVD1Q14C86 1478 aa25.19■■□□□ 1.62
SEC61A2-214ENST00000495368 WDR62O43379 1518 aa25.16■■□□□ 1.62
SEC61A2-214ENST00000495368 VPS8Q8N3P4 1428 aa25.12■■□□□ 1.61
SEC61A2-214ENST00000495368 AQRO60306 1485 aaKnown RBP eCLIP25.11■■□□□ 1.61
SEC61A2-214ENST00000495368 CUL7Q14999 1698 aa25.1■■□□□ 1.61
SEC61A2-214ENST00000495368 ARAP1Q96P48 1450 aa25.09■■□□□ 1.61
SEC61A2-214ENST00000495368 THOC2Q8NI27 1593 aaKnown RBP25.07■■□□□ 1.6
SEC61A2-214ENST00000495368 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
SEC61A2-214ENST00000495368 ARHGAP35Q9NRY4 1499 aa25.04■■□□□ 1.6
SEC61A2-214ENST00000495368 IFT140Q96RY7 1462 aa25.03■■□□□ 1.6
SEC61A2-214ENST00000495368 PBRM1Q86U86 1689 aa25■■□□□ 1.59
SEC61A2-214ENST00000495368 P3H3Q8IVL6 736 aa24.96■■□□□ 1.59
SEC61A2-214ENST00000495368 APLP2Q06481 763 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms