RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 AQRO60306 1485 aaKnown RBP eCLIP14.26□□□□□ -0.135e-7■■■■□ 19.7
SMARCC1-208ENST00000492896 FHAD1B1AJZ9 1412 aa14.25□□□□□ -0.13
SMARCC1-208ENST00000492896 PPARGC1BQ86YN6 1023 aaKnown RBP14.22□□□□□ -0.13
SMARCC1-208ENST00000492896 SNAPC4Q5SXM2 1469 aa14.2□□□□□ -0.14
SMARCC1-208ENST00000492896 SAMD9Q5K651 1589 aa14.19□□□□□ -0.14
SMARCC1-208ENST00000492896 MAGI1Q96QZ7 1491 aaPredicted RBP14.18□□□□□ -0.14
SMARCC1-208ENST00000492896 APLP2Q06481 763 aa14.17□□□□□ -0.14
SMARCC1-208ENST00000492896 IQGAP2Q13576 1575 aa14.17□□□□□ -0.14
SMARCC1-208ENST00000492896 PCF11O94913 1555 aaKnown RBP14.16□□□□□ -0.14
SMARCC1-208ENST00000492896 CFAP43Q8NDM7 1665 aa14.15□□□□□ -0.14
SMARCC1-208ENST00000492896 GRIN2AQ12879 1464 aa14.12□□□□□ -0.15
SMARCC1-208ENST00000492896 FHOD3Q2V2M9 1422 aa14.12□□□□□ -0.15
SMARCC1-208ENST00000492896 TTBK1Q5TCY1 1321 aaPredicted RBP14.12□□□□□ -0.15
SMARCC1-208ENST00000492896 MAP3K1Q13233 1512 aa14.11□□□□□ -0.15
SMARCC1-208ENST00000492896 TIAM1Q13009 1591 aa14.11□□□□□ -0.15
SMARCC1-208ENST00000492896 SYNJ2O15056 1496 aa14.11□□□□□ -0.15
SMARCC1-208ENST00000492896 FYCO1Q9BQS8 1478 aa14.1□□□□□ -0.15
SMARCC1-208ENST00000492896 UGGT2Q9NYU1 1516 aa14.08□□□□□ -0.16
SMARCC1-208ENST00000492896 FMN1Q68DA7 1419 aa14.07□□□□□ -0.16
SMARCC1-208ENST00000492896 CEP170Q5SW79 1584 aa14.06□□□□□ -0.16
SMARCC1-208ENST00000492896 CASKIN1Q8WXD9 1431 aa14.06□□□□□ -0.16
SMARCC1-208ENST00000492896 KIAA0586Q9BVV6 1533 aa14.05□□□□□ -0.16
SMARCC1-208ENST00000492896 HRCP23327 699 aa14.05□□□□□ -0.16
SMARCC1-208ENST00000492896 P3H3Q8IVL6 736 aa14.04□□□□□ -0.16
SMARCC1-208ENST00000492896 KIAA0556O60303 1618 aa14.03□□□□□ -0.16
SMARCC1-208ENST00000492896 CHD1O14646 1710 aa14.03□□□□□ -0.16
SMARCC1-208ENST00000492896 LRRIQ1Q96JM4 1722 aa14.03□□□□□ -0.16
SMARCC1-208ENST00000492896 NUP160Q12769 1436 aa14□□□□□ -0.17
SMARCC1-208ENST00000492896 HECW1Q76N89 1606 aa14□□□□□ -0.17
SMARCC1-208ENST00000492896 LRRC9Q6ZRR7 1453 aa13.99□□□□□ -0.17
SMARCC1-208ENST00000492896 CHMP7Q8WUX9 453 aaPredicted RBP13.99□□□□□ -0.17
SMARCC1-208ENST00000492896 KANK4Q5T7N3 995 aaPredicted RBP13.98□□□□□ -0.17
SMARCC1-208ENST00000492896 DISP1Q96F81 1524 aa13.96□□□□□ -0.17
SMARCC1-208ENST00000492896 CCDC18Q5T9S5 1454 aa13.94□□□□□ -0.18
SMARCC1-208ENST00000492896 RRBP1Q9P2E9 1410 aaKnown RBP13.94□□□□□ -0.18
SMARCC1-208ENST00000492896 FBLN2P98095 1184 aa13.93□□□□□ -0.18
SMARCC1-208ENST00000492896 EHBP1L1Q8N3D4 1523 aa13.92□□□□□ -0.18
SMARCC1-208ENST00000492896 ATP1B4Q9UN42 357 aaPredicted RBP13.92□□□□□ -0.18
SMARCC1-208ENST00000492896 RAPGEF6Q8TEU7 1601 aa13.91□□□□□ -0.18
SMARCC1-208ENST00000492896 SUPT6HQ7KZ85 1726 aaKnown RBP13.9□□□□□ -0.18
SMARCC1-208ENST00000492896 CARMIL2Q6F5E8 1435 aa13.89□□□□□ -0.19
SMARCC1-208ENST00000492896 CCNB3Q8WWL7 1395 aa13.87□□□□□ -0.19
SMARCC1-208ENST00000492896 SHROOM2Q13796 1616 aa13.86□□□□□ -0.19
SMARCC1-208ENST00000492896 EPRSP07814 1512 aaKnown RBP13.86□□□□□ -0.19
SMARCC1-208ENST00000492896 ZEB1P37275 1124 aaPredicted RBP13.86□□□□□ -0.19
SMARCC1-208ENST00000492896 MTUS2Q5JR59 1369 aa13.85□□□□□ -0.19
SMARCC1-208ENST00000492896 CDK13Q14004 1512 aaKnown RBP13.84□□□□□ -0.19
SMARCC1-208ENST00000492896 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.19
SMARCC1-208ENST00000492896 HNRNPUL2Q1KMD3 747 aaKnown RBP13.83□□□□□ -0.2
SMARCC1-208ENST00000492896 JPH4Q96JJ6 628 aa13.83□□□□□ -0.2
SMARCC1-208ENST00000492896 MAGI3Q5TCQ9 1506 aa13.83□□□□□ -0.2
SMARCC1-208ENST00000492896 NUP153P49790 1475 aaKnown RBP13.81□□□□□ -0.2
SMARCC1-208ENST00000492896 NCOA2Q15596 1464 aa13.8□□□□□ -0.2
SMARCC1-208ENST00000492896 ARHGEF11O15085 1522 aa13.8□□□□□ -0.2
SMARCC1-208ENST00000492896 CLASP1Q7Z460 1538 aa13.8□□□□□ -0.2
SMARCC1-208ENST00000492896 ABCA8O94911 1581 aa13.8□□□□□ -0.2
SMARCC1-208ENST00000492896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.78□□□□□ -0.2
SMARCC1-208ENST00000492896 CCER1Q8TC90 406 aaPredicted RBP13.78□□□□□ -0.2
SMARCC1-208ENST00000492896 PRG4Q92954 1404 aaPredicted RBP13.78□□□□□ -0.2
SMARCC1-208ENST00000492896 PLB1Q6P1J6 1458 aa13.77□□□□□ -0.21
SMARCC1-208ENST00000492896 FGD6Q6ZV73 1430 aa13.77□□□□□ -0.21
SMARCC1-208ENST00000492896 MYOM3Q5VTT5 1437 aa13.76□□□□□ -0.21
SMARCC1-208ENST00000492896 ADCY10Q96PN6 1610 aa13.75□□□□□ -0.21
SMARCC1-208ENST00000492896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMARCC1-208ENST00000492896 PTPN23Q9H3S7 1636 aa13.75□□□□□ -0.21
SMARCC1-208ENST00000492896 ITSN2Q9NZM3 1697 aa13.72□□□□□ -0.21
SMARCC1-208ENST00000492896 FAM50AQ14320 339 aaKnown RBP13.7□□□□□ -0.22
SMARCC1-208ENST00000492896 PTPRGP23470 1445 aa13.7□□□□□ -0.22
SMARCC1-208ENST00000492896 TROQ12816 1431 aaPredicted RBP13.7□□□□□ -0.22
SMARCC1-208ENST00000492896 ERCC6L2Q5T890 1561 aa13.7□□□□□ -0.22
SMARCC1-208ENST00000492896 TCOF1Q13428 1488 aaKnown RBP13.69□□□□□ -0.22
SMARCC1-208ENST00000492896 ARID3CA6NKF2 412 aa13.69□□□□□ -0.22
SMARCC1-208ENST00000492896 CDK11AQ9UQ88 783 aaPredicted RBP13.69□□□□□ -0.22
SMARCC1-208ENST00000492896 KIF14Q15058 1648 aa13.68□□□□□ -0.22
SMARCC1-208ENST00000492896 MIA2Q96PC5 1412 aa13.67□□□□□ -0.22
SMARCC1-208ENST00000492896 ITGAEP38570 1179 aa13.67□□□□□ -0.22
SMARCC1-208ENST00000492896 ATP10BO94823 1461 aa13.65□□□□□ -0.22
SMARCC1-208ENST00000492896 UACAQ9BZF9 1416 aa13.64□□□□□ -0.23
SMARCC1-208ENST00000492896 ABCC2Q92887 1545 aa13.64□□□□□ -0.23
SMARCC1-208ENST00000492896 CDC42BPAQ5VT25 1732 aa13.63□□□□□ -0.23
SMARCC1-208ENST00000492896 SETD5Q9C0A6 1442 aa13.63□□□□□ -0.23
SMARCC1-208ENST00000492896 GCC2Q8IWJ2 1684 aa13.63□□□□□ -0.23
SMARCC1-208ENST00000492896 DHX57Q6P158 1386 aaKnown RBP13.61□□□□□ -0.23
SMARCC1-208ENST00000492896 RAB3GAP2Q9H2M9 1393 aa13.61□□□□□ -0.23
SMARCC1-208ENST00000492896 DNMT1P26358 1616 aaKnown RBP13.61□□□□□ -0.23
SMARCC1-208ENST00000492896 ZCCHC11Q5TAX3 1644 aaKnown RBP13.59□□□□□ -0.23
SMARCC1-208ENST00000492896 UHRF1BP1LA0JNW5 1464 aa13.59□□□□□ -0.23
SMARCC1-208ENST00000492896 CROCC2H7BZ55 1655 aa13.58□□□□□ -0.24
SMARCC1-208ENST00000492896 CLSPNQ9HAW4 1339 aa13.58□□□□□ -0.24
SMARCC1-208ENST00000492896 PTPRKQ15262 1439 aa13.57□□□□□ -0.24
SMARCC1-208ENST00000492896 ADGBQ8N7X0 1667 aa13.57□□□□□ -0.24
SMARCC1-208ENST00000492896 ABCC10Q5T3U5 1492 aa13.57□□□□□ -0.24
SMARCC1-208ENST00000492896 HFM1A2PYH4 1435 aa13.56□□□□□ -0.24
SMARCC1-208ENST00000492896 AKNAQ7Z591 1439 aa13.56□□□□□ -0.24
SMARCC1-208ENST00000492896 CAMSAP2Q08AD1 1489 aa13.56□□□□□ -0.24
SMARCC1-208ENST00000492896 GPATCH8Q9UKJ3 1502 aaKnown RBP13.56□□□□□ -0.24
SMARCC1-208ENST00000492896 PLEKHD1A6NEE1 506 aa13.56□□□□□ -0.24
SMARCC1-208ENST00000492896 PREX2Q70Z35 1606 aa13.56□□□□□ -0.24
SMARCC1-208ENST00000492896 MYO5CQ9NQX4 1742 aa13.53□□□□□ -0.24
SMARCC1-208ENST00000492896 AEBP2Q6ZN18 517 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms