RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 NISCHQ9Y2I1 1504 aa20.61■□□□□ 0.89
SMARCC1-208ENST00000492896 CCDC180Q9P1Z9 1646 aa18.05■□□□□ 0.48
SMARCC1-208ENST00000492896 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
SMARCC1-208ENST00000492896 DCAF1Q9Y4B6 1507 aa17.07■□□□□ 0.32
SMARCC1-208ENST00000492896 DCAF8L2P0C7V8 631 aa16.86■□□□□ 0.29
SMARCC1-208ENST00000492896 ABCC9O60706 1549 aa16.85■□□□□ 0.29
SMARCC1-208ENST00000492896 MYO15BQ96JP2 1530 aa16.82■□□□□ 0.28
SMARCC1-208ENST00000492896 SHROOM4Q9ULL8 1493 aa16.81■□□□□ 0.28
SMARCC1-208ENST00000492896 NACADO15069 1562 aa16.71■□□□□ 0.27
SMARCC1-208ENST00000492896 RB1CC1Q8TDY2 1594 aa16.55■□□□□ 0.24
SMARCC1-208ENST00000492896 SCRIBQ14160 1630 aa16.55■□□□□ 0.24
SMARCC1-208ENST00000492896 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
SMARCC1-208ENST00000492896 SUPT5HO00267 1087 aaKnown RBP16.18■□□□□ 0.18
SMARCC1-208ENST00000492896 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
SMARCC1-208ENST00000492896 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
SMARCC1-208ENST00000492896 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
SMARCC1-208ENST00000492896 BAZ1AQ9NRL2 1556 aaPredicted RBP15.93■□□□□ 0.14
SMARCC1-208ENST00000492896 MROH2BQ7Z745 1585 aa15.92■□□□□ 0.14
SMARCC1-208ENST00000492896 SMARCA4P51532 1647 aa15.87■□□□□ 0.13
SMARCC1-208ENST00000492896 WIZO95785 1651 aa15.83■□□□□ 0.13
SMARCC1-208ENST00000492896 PABPN1Q86U42 306 aaKnown RBP eCLIP15.83■□□□□ 0.12
SMARCC1-208ENST00000492896 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
SMARCC1-208ENST00000492896 PEG3Q9GZU2 1588 aa15.66■□□□□ 0.1
SMARCC1-208ENST00000492896 SMARCA2P51531 1590 aa15.57■□□□□ 0.08
SMARCC1-208ENST00000492896 EIF4G1Q04637 1599 aaKnown RBP15.55■□□□□ 0.08
SMARCC1-208ENST00000492896 CHIC1Q5VXU3 224 aa15.54■□□□□ 0.08
SMARCC1-208ENST00000492896 ATAD2BQ9ULI0 1458 aa15.52■□□□□ 0.07
SMARCC1-208ENST00000492896 BAZ1BQ9UIG0 1483 aaKnown RBP15.47■□□□□ 0.07
SMARCC1-208ENST00000492896 CCDC88BA6NC98 1476 aa15.45■□□□□ 0.06
SMARCC1-208ENST00000492896 HMGXB3Q12766 1538 aa15.43■□□□□ 0.06
SMARCC1-208ENST00000492896 NCAPD3P42695 1498 aa15.36■□□□□ 0.05
SMARCC1-208ENST00000492896 CC2D2AQ9P2K1 1620 aa15.3■□□□□ 0.04
SMARCC1-208ENST00000492896 TRIM41Q8WV44 630 aa15.22■□□□□ 0.03
SMARCC1-208ENST00000492896 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
SMARCC1-208ENST00000492896 PRDM2Q13029 1718 aa15.18■□□□□ 0.02
SMARCC1-208ENST00000492896 WRNQ14191 1432 aaPredicted RBP eCLIP15.06■□□□□ 0
SMARCC1-208ENST00000492896 CFTRP13569 1480 aa15.05■□□□□ -0
SMARCC1-208ENST00000492896 SYNJ1O43426 1573 aa15.04■□□□□ -0
SMARCC1-208ENST00000492896 BIVM-ERCC5R4GMW8 1640 aa15.01□□□□□ -0.01
SMARCC1-208ENST00000492896 TOP2BQ02880 1626 aa14.99□□□□□ -0.01
SMARCC1-208ENST00000492896 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.02
SMARCC1-208ENST00000492896 FAM9AQ8IZU1 332 aaPredicted RBP14.93□□□□□ -0.02
SMARCC1-208ENST00000492896 EEA1Q15075 1411 aa14.92□□□□□ -0.02
SMARCC1-208ENST00000492896 LOC105371045A0A1W2PR82 267 aa14.91□□□□□ -0.02
SMARCC1-208ENST00000492896 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
SMARCC1-208ENST00000492896 CUX1P39880 1505 aa14.89□□□□□ -0.03
SMARCC1-208ENST00000492896 SOGA1O94964 1423 aa14.87□□□□□ -0.03
SMARCC1-208ENST00000492896 FANCD2Q9BXW9 1451 aa14.83□□□□□ -0.03
SMARCC1-208ENST00000492896 RUSC2Q8N2Y8 1516 aa14.82□□□□□ -0.04
SMARCC1-208ENST00000492896 NESP48681 1621 aa14.81□□□□□ -0.04
SMARCC1-208ENST00000492896 KIF21BO75037 1637 aa14.77□□□□□ -0.04
SMARCC1-208ENST00000492896 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.04
SMARCC1-208ENST00000492896 CEP164Q9UPV0 1460 aa14.76□□□□□ -0.05
SMARCC1-208ENST00000492896 KIF21AQ7Z4S6 1674 aa14.75□□□□□ -0.05
SMARCC1-208ENST00000492896 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
SMARCC1-208ENST00000492896 GOLGA3Q08378 1498 aa14.73□□□□□ -0.05
SMARCC1-208ENST00000492896 PDS5BQ9NTI5 1447 aa14.72□□□□□ -0.05
SMARCC1-208ENST00000492896 FGD5Q6ZNL6 1462 aa14.71□□□□□ -0.05
SMARCC1-208ENST00000492896 DNAJC5BQ9UF47 199 aa14.71□□□□□ -0.05
SMARCC1-208ENST00000492896 EHMT2Q96KQ7 1210 aa14.7□□□□□ -0.06
SMARCC1-208ENST00000492896 TOPBP1Q92547 1522 aa14.7□□□□□ -0.06
SMARCC1-208ENST00000492896 KIF27Q86VH2 1401 aa14.67□□□□□ -0.06
SMARCC1-208ENST00000492896 TNIKQ9UKE5 1360 aa14.65□□□□□ -0.06
SMARCC1-208ENST00000492896 URB2Q14146 1524 aaKnown RBP14.64□□□□□ -0.07
SMARCC1-208ENST00000492896 ERICH3Q5RHP9 1530 aa14.64□□□□□ -0.07
SMARCC1-208ENST00000492896 WDR97A6NE52 1622 aa14.63□□□□□ -0.07
SMARCC1-208ENST00000492896 CUX2O14529 1486 aa14.62□□□□□ -0.07
SMARCC1-208ENST00000492896 POLA1P09884 1462 aaPredicted RBP14.62□□□□□ -0.07
SMARCC1-208ENST00000492896 CEP162Q5TB80 1403 aa14.6□□□□□ -0.07
SMARCC1-208ENST00000492896 PRXQ9BXM0 1461 aa14.59□□□□□ -0.07
SMARCC1-208ENST00000492896 RAPGEF2Q9Y4G8 1499 aa14.59□□□□□ -0.07
SMARCC1-208ENST00000492896 ABCA10Q8WWZ4 1543 aa14.59□□□□□ -0.07
SMARCC1-208ENST00000492896 MRC2Q9UBG0 1479 aa14.57□□□□□ -0.08
SMARCC1-208ENST00000492896 UBTFP17480 764 aaKnown RBP14.56□□□□□ -0.08
SMARCC1-208ENST00000492896 RAD54L2Q9Y4B4 1467 aa14.55□□□□□ -0.08
SMARCC1-208ENST00000492896 CUL7Q14999 1698 aa14.52□□□□□ -0.09
SMARCC1-208ENST00000492896 ABCA5Q8WWZ7 1642 aa14.52□□□□□ -0.09
SMARCC1-208ENST00000492896 WDR62O43379 1518 aa14.5□□□□□ -0.09
SMARCC1-208ENST00000492896 TARBP1Q13395 1621 aaKnown RBP14.49□□□□□ -0.09
SMARCC1-208ENST00000492896 IGF1RP08069 1367 aa14.47□□□□□ -0.09
SMARCC1-208ENST00000492896 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
SMARCC1-208ENST00000492896 ERCC6Q03468 1493 aa14.46□□□□□ -0.09
SMARCC1-208ENST00000492896 CLIP1P30622 1438 aa14.46□□□□□ -0.09
SMARCC1-208ENST00000492896 PBRM1Q86U86 1689 aa14.45□□□□□ -0.1
SMARCC1-208ENST00000492896 CARMIL1Q5VZK9 1371 aa14.43□□□□□ -0.1
SMARCC1-208ENST00000492896 GAPVD1Q14C86 1478 aa14.41□□□□□ -0.1
SMARCC1-208ENST00000492896 CTTNBP2Q8WZ74 1663 aa14.41□□□□□ -0.1
SMARCC1-208ENST00000492896 IFT140Q96RY7 1462 aa14.38□□□□□ -0.11
SMARCC1-208ENST00000492896 VPS8Q8N3P4 1428 aa14.36□□□□□ -0.11
SMARCC1-208ENST00000492896 TRIM26Q12899 539 aaPredicted RBP14.36□□□□□ -0.11
SMARCC1-208ENST00000492896 TDRD9Q8NDG6 1382 aaKnown RBP14.35□□□□□ -0.11
SMARCC1-208ENST00000492896 PCGF6Q9BYE7 350 aa14.35□□□□□ -0.11
SMARCC1-208ENST00000492896 ARAP1Q96P48 1450 aa14.33□□□□□ -0.12
SMARCC1-208ENST00000492896 ADAMTS12P58397 1594 aa14.33□□□□□ -0.12
SMARCC1-208ENST00000492896 EIF4G3O43432 1585 aaKnown RBP14.31□□□□□ -0.12
SMARCC1-208ENST00000492896 ARHGAP35Q9NRY4 1499 aa14.3□□□□□ -0.12
SMARCC1-208ENST00000492896 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
SMARCC1-208ENST00000492896 RANGAP1P46060 587 aaPredicted RBP14.28□□□□□ -0.12
SMARCC1-208ENST00000492896 EFCAB5A4FU69 1503 aa14.27□□□□□ -0.12
SMARCC1-208ENST00000492896 ZNF608Q9ULD9 1512 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms