RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 PBRM1Q86U86 1689 aa27.91■■■□□ 2.06
POLR2J3-205ENST00000489144 VPS8Q8N3P4 1428 aa27.88■■■□□ 2.05
POLR2J3-205ENST00000489144 ARHGAP35Q9NRY4 1499 aa27.88■■■□□ 2.05
POLR2J3-205ENST00000489144 EIF4G3O43432 1585 aaKnown RBP27.83■■■□□ 2.05
POLR2J3-205ENST00000489144 GRIN2BQ13224 1484 aa27.81■■■□□ 2.04
POLR2J3-205ENST00000489144 SNAPC4Q5SXM2 1469 aa27.77■■■□□ 2.04
POLR2J3-205ENST00000489144 FBLN2P98095 1184 aa27.76■■■□□ 2.03
POLR2J3-205ENST00000489144 ADAMTS12P58397 1594 aa27.74■■■□□ 2.03
POLR2J3-205ENST00000489144 APLP2Q06481 763 aa27.73■■■□□ 2.03
POLR2J3-205ENST00000489144 FHAD1B1AJZ9 1412 aa27.73■■■□□ 2.03
POLR2J3-205ENST00000489144 CTTNBP2Q8WZ74 1663 aa27.72■■■□□ 2.03
POLR2J3-205ENST00000489144 FHOD3Q2V2M9 1422 aa27.72■■■□□ 2.03
POLR2J3-205ENST00000489144 ATP1B4Q9UN42 357 aaPredicted RBP27.7■■■□□ 2.03
POLR2J3-205ENST00000489144 KANK4Q5T7N3 995 aaPredicted RBP27.63■■■□□ 2.01
POLR2J3-205ENST00000489144 BCL11AQ9H165 835 aa27.61■■■□□ 2.01
POLR2J3-205ENST00000489144 ACIN1Q9UKV3 1341 aaKnown RBP27.61■■■□□ 2.01
POLR2J3-205ENST00000489144 CHMP7Q8WUX9 453 aaPredicted RBP27.6■■■□□ 2.01
POLR2J3-205ENST00000489144 PRKCSHP14314 528 aaPredicted RBP27.57■■■□□ 2
POLR2J3-205ENST00000489144 GRIN2AQ12879 1464 aa27.53■■■□□ 2
POLR2J3-205ENST00000489144 PCF11O94913 1555 aaKnown RBP27.49■■□□□ 1.99
POLR2J3-205ENST00000489144 MAGI1Q96QZ7 1491 aaPredicted RBP27.48■■□□□ 1.99
POLR2J3-205ENST00000489144 IQGAP2Q13576 1575 aa27.48■■□□□ 1.99
POLR2J3-205ENST00000489144 EFCAB5A4FU69 1503 aa27.46■■□□□ 1.99
POLR2J3-205ENST00000489144 SYNJ2O15056 1496 aa27.46■■□□□ 1.99
POLR2J3-205ENST00000489144 ARID3CA6NKF2 412 aa27.43■■□□□ 1.98
POLR2J3-205ENST00000489144 SAMD9Q5K651 1589 aa27.42■■□□□ 1.98
POLR2J3-205ENST00000489144 CEP170Q5SW79 1584 aa27.41■■□□□ 1.98
POLR2J3-205ENST00000489144 ZEB1P37275 1124 aaPredicted RBP27.4■■□□□ 1.98
POLR2J3-205ENST00000489144 HNRNPUL2Q1KMD3 747 aaKnown RBP27.38■■□□□ 1.97
POLR2J3-205ENST00000489144 NEUROD1Q13562 356 aa27.37■■□□□ 1.97
POLR2J3-205ENST00000489144 GTF3C3Q9Y5Q9 886 aa27.37■■□□□ 1.97
POLR2J3-205ENST00000489144 CENPBP07199 599 aaPredicted RBP27.37■■□□□ 1.97
POLR2J3-205ENST00000489144 KIAA0586Q9BVV6 1533 aa27.34■■□□□ 1.97
POLR2J3-205ENST00000489144 TIAM1Q13009 1591 aa27.32■■□□□ 1.96
POLR2J3-205ENST00000489144 FMN1Q68DA7 1419 aa27.31■■□□□ 1.96
POLR2J3-205ENST00000489144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.3■■□□□ 1.96
POLR2J3-205ENST00000489144 CASKIN1Q8WXD9 1431 aa27.29■■□□□ 1.96
POLR2J3-205ENST00000489144 FYCO1Q9BQS8 1478 aa27.26■■□□□ 1.96
POLR2J3-205ENST00000489144 DISP1Q96F81 1524 aa27.26■■□□□ 1.95
POLR2J3-205ENST00000489144 UGGT2Q9NYU1 1516 aa27.25■■□□□ 1.95
POLR2J3-205ENST00000489144 CHD1O14646 1710 aa27.24■■□□□ 1.95
POLR2J3-205ENST00000489144 JPH4Q96JJ6 628 aa27.23■■□□□ 1.95
POLR2J3-205ENST00000489144 NUP160Q12769 1436 aa27.23■■□□□ 1.95
POLR2J3-205ENST00000489144 LRRC9Q6ZRR7 1453 aa27.23■■□□□ 1.95
POLR2J3-205ENST00000489144 LRRIQ1Q96JM4 1722 aa27.23■■□□□ 1.95
POLR2J3-205ENST00000489144 ITGAEP38570 1179 aa27.2■■□□□ 1.95
POLR2J3-205ENST00000489144 KIAA0556O60303 1618 aa27.2■■□□□ 1.95
POLR2J3-205ENST00000489144 CFAP43Q8NDM7 1665 aa27.18■■□□□ 1.94
POLR2J3-205ENST00000489144 PHLDB1Q86UU1 1377 aa27.14■■□□□ 1.94
POLR2J3-205ENST00000489144 CDK13Q14004 1512 aaKnown RBP27.12■■□□□ 1.93
POLR2J3-205ENST00000489144 MAP3K1Q13233 1512 aa27.11■■□□□ 1.93
POLR2J3-205ENST00000489144 ERICH6Q7L0X2 663 aa27.1■■□□□ 1.93
POLR2J3-205ENST00000489144 MTUS2Q5JR59 1369 aa27.1■■□□□ 1.93
POLR2J3-205ENST00000489144 CCER1Q8TC90 406 aaPredicted RBP27.07■■□□□ 1.92
POLR2J3-205ENST00000489144 PLB1Q6P1J6 1458 aa27.05■■□□□ 1.92
POLR2J3-205ENST00000489144 FAM50AQ14320 339 aaKnown RBP27.04■■□□□ 1.92
POLR2J3-205ENST00000489144 PRG4Q92954 1404 aaPredicted RBP27.04■■□□□ 1.92
POLR2J3-205ENST00000489144 MAGI3Q5TCQ9 1506 aa27.04■■□□□ 1.92
POLR2J3-205ENST00000489144 CCNB3Q8WWL7 1395 aa27.03■■□□□ 1.92
POLR2J3-205ENST00000489144 HECW1Q76N89 1606 aa27.02■■□□□ 1.92
POLR2J3-205ENST00000489144 EPRSP07814 1512 aaKnown RBP27.02■■□□□ 1.92
POLR2J3-205ENST00000489144 CARMIL2Q6F5E8 1435 aa27.02■■□□□ 1.92
POLR2J3-205ENST00000489144 RRBP1Q9P2E9 1410 aaKnown RBP27.01■■□□□ 1.91
POLR2J3-205ENST00000489144 NUP153P49790 1475 aaKnown RBP26.97■■□□□ 1.91
POLR2J3-205ENST00000489144 ERCC6L2Q5T890 1561 aa26.96■■□□□ 1.91
POLR2J3-205ENST00000489144 RAPGEF6Q8TEU7 1601 aa26.95■■□□□ 1.9
POLR2J3-205ENST00000489144 CCDC18Q5T9S5 1454 aa26.91■■□□□ 1.9
POLR2J3-205ENST00000489144 NCOA2Q15596 1464 aa26.91■■□□□ 1.9
POLR2J3-205ENST00000489144 EHBP1L1Q8N3D4 1523 aa26.86■■□□□ 1.89
POLR2J3-205ENST00000489144 PTPRGP23470 1445 aa26.85■■□□□ 1.89
POLR2J3-205ENST00000489144 SUPT6HQ7KZ85 1726 aaKnown RBP26.82■■□□□ 1.88
POLR2J3-205ENST00000489144 FGD6Q6ZV73 1430 aa26.81■■□□□ 1.88
POLR2J3-205ENST00000489144 ANP32EQ9BTT0 268 aa26.8■■□□□ 1.88
POLR2J3-205ENST00000489144 SHROOM2Q13796 1616 aa26.78■■□□□ 1.88
POLR2J3-205ENST00000489144 CLASP1Q7Z460 1538 aa26.78■■□□□ 1.88
POLR2J3-205ENST00000489144 MYOM3Q5VTT5 1437 aa26.75■■□□□ 1.87
POLR2J3-205ENST00000489144 ABCA8O94911 1581 aa26.75■■□□□ 1.87
POLR2J3-205ENST00000489144 ATP10BO94823 1461 aa26.7■■□□□ 1.87
POLR2J3-205ENST00000489144 CDK11AQ9UQ88 783 aaPredicted RBP26.7■■□□□ 1.86
POLR2J3-205ENST00000489144 ARHGEF11O15085 1522 aa26.69■■□□□ 1.86
POLR2J3-205ENST00000489144 KIF14Q15058 1648 aa26.67■■□□□ 1.86
POLR2J3-205ENST00000489144 ZNF644Q9H582 1327 aaPredicted RBP26.67■■□□□ 1.86
POLR2J3-205ENST00000489144 CHIC2Q9UKJ5 165 aa26.66■■□□□ 1.86
POLR2J3-205ENST00000489144 PTPRKQ15262 1439 aa26.65■■□□□ 1.86
POLR2J3-205ENST00000489144 PTPN23Q9H3S7 1636 aa26.64■■□□□ 1.86
POLR2J3-205ENST00000489144 TROQ12816 1431 aaPredicted RBP26.63■■□□□ 1.85
POLR2J3-205ENST00000489144 UACAQ9BZF9 1416 aa26.63■■□□□ 1.85
POLR2J3-205ENST00000489144 RAB3GAP2Q9H2M9 1393 aa26.63■■□□□ 1.85
POLR2J3-205ENST00000489144 PLEKHD1A6NEE1 506 aa26.63■■□□□ 1.85
POLR2J3-205ENST00000489144 OSCARQ8IYS5 282 aa26.62■■□□□ 1.85
POLR2J3-205ENST00000489144 ZNF777Q9ULD5 760 aaPredicted RBP26.62■■□□□ 1.85
POLR2J3-205ENST00000489144 DHX57Q6P158 1386 aaKnown RBP26.56■■□□□ 1.84
POLR2J3-205ENST00000489144 RRP7BPQ9NSQ0 103 aa26.54■■□□□ 1.84
POLR2J3-205ENST00000489144 SETD5Q9C0A6 1442 aa26.54■■□□□ 1.84
POLR2J3-205ENST00000489144 KCNH8Q96L42 1107 aa26.53■■□□□ 1.84
POLR2J3-205ENST00000489144 CFDP1Q9UEE9 299 aaPredicted RBP26.52■■□□□ 1.84
POLR2J3-205ENST00000489144 ABCC2Q92887 1545 aa26.5■■□□□ 1.83
POLR2J3-205ENST00000489144 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.5■■□□□ 1.83
POLR2J3-205ENST00000489144 GPATCH8Q9UKJ3 1502 aaKnown RBP26.47■■□□□ 1.83
POLR2J3-205ENST00000489144 TCOF1Q13428 1488 aaKnown RBP26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms