RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 EIF4G3O43432 1585 aaKnown RBP13.69□□□□□ -0.22
CDC42SE1-204ENST00000483763 OSCARQ8IYS5 282 aa13.68□□□□□ -0.22
CDC42SE1-204ENST00000483763 CUL7Q14999 1698 aa13.67□□□□□ -0.22
CDC42SE1-204ENST00000483763 PBRM1Q86U86 1689 aa13.64□□□□□ -0.23
CDC42SE1-204ENST00000483763 P3H3Q8IVL6 736 aa13.64□□□□□ -0.23
CDC42SE1-204ENST00000483763 APLP2Q06481 763 aa13.63□□□□□ -0.23
CDC42SE1-204ENST00000483763 KANK4Q5T7N3 995 aaPredicted RBP13.63□□□□□ -0.23
CDC42SE1-204ENST00000483763 GRIN2BQ13224 1484 aa13.61□□□□□ -0.23
CDC42SE1-204ENST00000483763 CHMP7Q8WUX9 453 aaPredicted RBP13.6□□□□□ -0.23
CDC42SE1-204ENST00000483763 SNAPC4Q5SXM2 1469 aa13.59□□□□□ -0.23
CDC42SE1-204ENST00000483763 FHOD3Q2V2M9 1422 aa13.57□□□□□ -0.24
CDC42SE1-204ENST00000483763 CHD1O14646 1710 aa13.57□□□□□ -0.24
CDC42SE1-204ENST00000483763 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
CDC42SE1-204ENST00000483763 CTTNBP2Q8WZ74 1663 aa13.55□□□□□ -0.24
CDC42SE1-204ENST00000483763 ADAMTS12P58397 1594 aa13.55□□□□□ -0.24
CDC42SE1-204ENST00000483763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.24
CDC42SE1-204ENST00000483763 EFCAB5A4FU69 1503 aa13.5□□□□□ -0.25
CDC42SE1-204ENST00000483763 CYB5RLQ6IPT4 315 aa13.5□□□□□ -0.25
CDC42SE1-204ENST00000483763 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
CDC42SE1-204ENST00000483763 HNRNPUL2Q1KMD3 747 aaKnown RBP13.48□□□□□ -0.25
CDC42SE1-204ENST00000483763 ATP1B4Q9UN42 357 aaPredicted RBP13.48□□□□□ -0.25
CDC42SE1-204ENST00000483763 PCF11O94913 1555 aaKnown RBP13.48□□□□□ -0.25
CDC42SE1-204ENST00000483763 SAMD9Q5K651 1589 aa13.47□□□□□ -0.25
CDC42SE1-204ENST00000483763 TIAM1Q13009 1591 aa13.45□□□□□ -0.26
CDC42SE1-204ENST00000483763 GRIN2AQ12879 1464 aa13.45□□□□□ -0.26
CDC42SE1-204ENST00000483763 SYNJ2O15056 1496 aa13.44□□□□□ -0.26
CDC42SE1-204ENST00000483763 CASKIN1Q8WXD9 1431 aa13.44□□□□□ -0.26
CDC42SE1-204ENST00000483763 MAP3K1Q13233 1512 aa13.43□□□□□ -0.26
CDC42SE1-204ENST00000483763 IQGAP2Q13576 1575 aa13.43□□□□□ -0.26
CDC42SE1-204ENST00000483763 FMN1Q68DA7 1419 aa13.43□□□□□ -0.26
CDC42SE1-204ENST00000483763 LRRC9Q6ZRR7 1453 aa13.43□□□□□ -0.26
CDC42SE1-204ENST00000483763 RIMBP3CA6NJZ7 1639 aa13.42□□□□□ -0.26
CDC42SE1-204ENST00000483763 RIMBP3BA6NNM3 1639 aa13.42□□□□□ -0.26
CDC42SE1-204ENST00000483763 CCER1Q8TC90 406 aaPredicted RBP13.42□□□□□ -0.26
CDC42SE1-204ENST00000483763 FYCO1Q9BQS8 1478 aa13.42□□□□□ -0.26
CDC42SE1-204ENST00000483763 RIMBP3Q9UFD9 1639 aa13.42□□□□□ -0.26
CDC42SE1-204ENST00000483763 KIAA0586Q9BVV6 1533 aa13.4□□□□□ -0.26
CDC42SE1-204ENST00000483763 ZEB1P37275 1124 aaPredicted RBP13.39□□□□□ -0.27
CDC42SE1-204ENST00000483763 RRBP1Q9P2E9 1410 aaKnown RBP13.39□□□□□ -0.27
CDC42SE1-204ENST00000483763 ARHGEF11O15085 1522 aa13.39□□□□□ -0.27
CDC42SE1-204ENST00000483763 PHLDB1Q86UU1 1377 aa13.38□□□□□ -0.27
CDC42SE1-204ENST00000483763 CEP170Q5SW79 1584 aa13.37□□□□□ -0.27
CDC42SE1-204ENST00000483763 UGGT2Q9NYU1 1516 aa13.37□□□□□ -0.27
CDC42SE1-204ENST00000483763 CFAP43Q8NDM7 1665 aa13.36□□□□□ -0.27
CDC42SE1-204ENST00000483763 CCNB3Q8WWL7 1395 aa13.36□□□□□ -0.27
CDC42SE1-204ENST00000483763 ERCC6L2Q5T890 1561 aa13.36□□□□□ -0.27
CDC42SE1-204ENST00000483763 DISP1Q96F81 1524 aa13.35□□□□□ -0.27
CDC42SE1-204ENST00000483763 LRRIQ1Q96JM4 1722 aa13.34□□□□□ -0.27
CDC42SE1-204ENST00000483763 NUP160Q12769 1436 aa13.33□□□□□ -0.28
CDC42SE1-204ENST00000483763 CLASP1Q7Z460 1538 aa13.32□□□□□ -0.28
CDC42SE1-204ENST00000483763 ARID3CA6NKF2 412 aa13.31□□□□□ -0.28
CDC42SE1-204ENST00000483763 ITGAEP38570 1179 aa13.31□□□□□ -0.28
CDC42SE1-204ENST00000483763 JPH4Q96JJ6 628 aa13.31□□□□□ -0.28
CDC42SE1-204ENST00000483763 KIAA0556O60303 1618 aa13.3□□□□□ -0.28
CDC42SE1-204ENST00000483763 MTUS2Q5JR59 1369 aa13.29□□□□□ -0.28
CDC42SE1-204ENST00000483763 MAGI3Q5TCQ9 1506 aa13.28□□□□□ -0.28
CDC42SE1-204ENST00000483763 FAM50AQ14320 339 aaKnown RBP13.26□□□□□ -0.29
CDC42SE1-204ENST00000483763 EPRSP07814 1512 aaKnown RBP13.26□□□□□ -0.29
CDC42SE1-204ENST00000483763 CDK13Q14004 1512 aaKnown RBP13.25□□□□□ -0.29
CDC42SE1-204ENST00000483763 PRG4Q92954 1404 aaPredicted RBP13.25□□□□□ -0.29
CDC42SE1-204ENST00000483763 TRHP20396 242 aaPredicted RBP13.24□□□□□ -0.29
CDC42SE1-204ENST00000483763 HECW1Q76N89 1606 aa13.23□□□□□ -0.29
CDC42SE1-204ENST00000483763 NCOA2Q15596 1464 aa13.23□□□□□ -0.29
CDC42SE1-204ENST00000483763 CARMIL2Q6F5E8 1435 aa13.23□□□□□ -0.29
CDC42SE1-204ENST00000483763 NUP153P49790 1475 aaKnown RBP13.23□□□□□ -0.29
CDC42SE1-204ENST00000483763 CCDC18Q5T9S5 1454 aa13.22□□□□□ -0.29
CDC42SE1-204ENST00000483763 PLB1Q6P1J6 1458 aa13.22□□□□□ -0.29
CDC42SE1-204ENST00000483763 FGD6Q6ZV73 1430 aa13.21□□□□□ -0.29
CDC42SE1-204ENST00000483763 EHBP1L1Q8N3D4 1523 aa13.2□□□□□ -0.3
CDC42SE1-204ENST00000483763 DHX57Q6P158 1386 aaKnown RBP13.18□□□□□ -0.3
CDC42SE1-204ENST00000483763 RAPGEF6Q8TEU7 1601 aa13.18□□□□□ -0.3
CDC42SE1-204ENST00000483763 MYOM3Q5VTT5 1437 aa13.17□□□□□ -0.3
CDC42SE1-204ENST00000483763 RAB3GAP2Q9H2M9 1393 aa13.16□□□□□ -0.3
CDC42SE1-204ENST00000483763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDC42SE1-204ENST00000483763 SUPT6HQ7KZ85 1726 aaKnown RBP13.16□□□□□ -0.3
CDC42SE1-204ENST00000483763 PTPRKQ15262 1439 aa13.15□□□□□ -0.3
CDC42SE1-204ENST00000483763 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
CDC42SE1-204ENST00000483763 SHROOM2Q13796 1616 aa13.14□□□□□ -0.31
CDC42SE1-204ENST00000483763 SETD5Q9C0A6 1442 aa13.12□□□□□ -0.31
CDC42SE1-204ENST00000483763 PTPRGP23470 1445 aa13.11□□□□□ -0.31
CDC42SE1-204ENST00000483763 ABCA8O94911 1581 aa13.1□□□□□ -0.31
CDC42SE1-204ENST00000483763 CDK11AQ9UQ88 783 aaPredicted RBP13.09□□□□□ -0.31
CDC42SE1-204ENST00000483763 PTPN23Q9H3S7 1636 aa13.09□□□□□ -0.31
CDC42SE1-204ENST00000483763 ATP10BO94823 1461 aa13.08□□□□□ -0.32
CDC42SE1-204ENST00000483763 MYT1Q01538 1121 aa13.07□□□□□ -0.32
CDC42SE1-204ENST00000483763 TROQ12816 1431 aaPredicted RBP13.07□□□□□ -0.32
CDC42SE1-204ENST00000483763 ZNF644Q9H582 1327 aaPredicted RBP13.07□□□□□ -0.32
CDC42SE1-204ENST00000483763 CLSPNQ9HAW4 1339 aa13.06□□□□□ -0.32
CDC42SE1-204ENST00000483763 TCOF1Q13428 1488 aaKnown RBP13.06□□□□□ -0.32
CDC42SE1-204ENST00000483763 MIA2Q96PC5 1412 aa13.05□□□□□ -0.32
CDC42SE1-204ENST00000483763 CHIC2Q9UKJ5 165 aa13.05□□□□□ -0.32
CDC42SE1-204ENST00000483763 KIF14Q15058 1648 aa13.03□□□□□ -0.32
CDC42SE1-204ENST00000483763 HFM1A2PYH4 1435 aa13.03□□□□□ -0.32
CDC42SE1-204ENST00000483763 MAPKBP1O60336 1514 aa13.03□□□□□ -0.32
CDC42SE1-204ENST00000483763 PLEKHD1A6NEE1 506 aa13.03□□□□□ -0.32
CDC42SE1-204ENST00000483763 NAIPQ13075 1403 aa13.02□□□□□ -0.32
CDC42SE1-204ENST00000483763 NPM1P06748 294 aaKnown RBP eCLIP13.02□□□□□ -0.33
CDC42SE1-204ENST00000483763 RRP7BPQ9NSQ0 103 aa13.02□□□□□ -0.33
CDC42SE1-204ENST00000483763 UACAQ9BZF9 1416 aa13.02□□□□□ -0.33
CDC42SE1-204ENST00000483763 GPATCH8Q9UKJ3 1502 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms