RNA–Protein interactions for RNA: ENST00000479810.6

FAM3B-205, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 2,742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-205ENST00000479810 CHMP7Q8WUX9 453 aaPredicted RBP20.45■□□□□ 0.86
FAM3B-205ENST00000479810 PBRM1Q86U86 1689 aa20.45■□□□□ 0.86
FAM3B-205ENST00000479810 GRIN2BQ13224 1484 aa20.45■□□□□ 0.86
FAM3B-205ENST00000479810 ARID3CA6NKF2 412 aa20.43■□□□□ 0.86
FAM3B-205ENST00000479810 FHOD3Q2V2M9 1422 aa20.41■□□□□ 0.86
FAM3B-205ENST00000479810 CUL7Q14999 1698 aa20.4■□□□□ 0.86
FAM3B-205ENST00000479810 VPS8Q8N3P4 1428 aa20.39■□□□□ 0.85
FAM3B-205ENST00000479810 KANK4Q5T7N3 995 aaPredicted RBP20.39■□□□□ 0.85
FAM3B-205ENST00000479810 APLP2Q06481 763 aa20.38■□□□□ 0.85
FAM3B-205ENST00000479810 FHAD1B1AJZ9 1412 aa20.38■□□□□ 0.85
FAM3B-205ENST00000479810 ADAMTS12P58397 1594 aa20.34■□□□□ 0.85
FAM3B-205ENST00000479810 GRIN2AQ12879 1464 aa20.25■□□□□ 0.83
FAM3B-205ENST00000479810 CTTNBP2Q8WZ74 1663 aa20.25■□□□□ 0.83
FAM3B-205ENST00000479810 SYNJ2O15056 1496 aa20.2■□□□□ 0.82
FAM3B-205ENST00000479810 HNRNPUL2Q1KMD3 747 aaKnown RBP20.19■□□□□ 0.82
FAM3B-205ENST00000479810 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
FAM3B-205ENST00000479810 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
FAM3B-205ENST00000479810 JPH4Q96JJ6 628 aa20.16■□□□□ 0.82
FAM3B-205ENST00000479810 IQGAP2Q13576 1575 aa20.15■□□□□ 0.82
FAM3B-205ENST00000479810 ITGAEP38570 1179 aa20.13■□□□□ 0.81
FAM3B-205ENST00000479810 PCF11O94913 1555 aaKnown RBP20.13■□□□□ 0.81
FAM3B-205ENST00000479810 KIAA0586Q9BVV6 1533 aa20.1■□□□□ 0.81
FAM3B-205ENST00000479810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.09■□□□□ 0.81
FAM3B-205ENST00000479810 CHD1O14646 1710 aa20.06■□□□□ 0.8
FAM3B-205ENST00000479810 DISP1Q96F81 1524 aa20.05■□□□□ 0.8
FAM3B-205ENST00000479810 SAMD9Q5K651 1589 aa20.04■□□□□ 0.8
FAM3B-205ENST00000479810 EFCAB5A4FU69 1503 aa20.04■□□□□ 0.8
FAM3B-205ENST00000479810 NUP160Q12769 1436 aa20.02■□□□□ 0.8
FAM3B-205ENST00000479810 FMN1Q68DA7 1419 aa20.01■□□□□ 0.79
FAM3B-205ENST00000479810 CASKIN1Q8WXD9 1431 aa19.98■□□□□ 0.79
FAM3B-205ENST00000479810 TIAM1Q13009 1591 aa19.97■□□□□ 0.79
FAM3B-205ENST00000479810 PLB1Q6P1J6 1458 aa19.97■□□□□ 0.79
FAM3B-205ENST00000479810 PRG4Q92954 1404 aaPredicted RBP19.96■□□□□ 0.79
FAM3B-205ENST00000479810 CDK13Q14004 1512 aaKnown RBP19.96■□□□□ 0.79
FAM3B-205ENST00000479810 UGGT2Q9NYU1 1516 aa19.96■□□□□ 0.79
FAM3B-205ENST00000479810 LRRIQ1Q96JM4 1722 aa19.95■□□□□ 0.78
FAM3B-205ENST00000479810 FAM50AQ14320 339 aaKnown RBP19.95■□□□□ 0.78
FAM3B-205ENST00000479810 ERCC6L2Q5T890 1561 aa19.95■□□□□ 0.78
FAM3B-205ENST00000479810 KIAA0556O60303 1618 aa19.95■□□□□ 0.78
FAM3B-205ENST00000479810 PHLDB1Q86UU1 1377 aa19.94■□□□□ 0.78
FAM3B-205ENST00000479810 LRRC9Q6ZRR7 1453 aa19.94■□□□□ 0.78
FAM3B-205ENST00000479810 MTUS2Q5JR59 1369 aa19.93■□□□□ 0.78
FAM3B-205ENST00000479810 FYCO1Q9BQS8 1478 aa19.92■□□□□ 0.78
FAM3B-205ENST00000479810 HRCP23327 699 aa19.92■□□□□ 0.78
FAM3B-205ENST00000479810 MAGI3Q5TCQ9 1506 aa19.87■□□□□ 0.77
FAM3B-205ENST00000479810 CARMIL2Q6F5E8 1435 aa19.86■□□□□ 0.77
FAM3B-205ENST00000479810 CCER1Q8TC90 406 aaPredicted RBP19.85■□□□□ 0.77
FAM3B-205ENST00000479810 EPRSP07814 1512 aaKnown RBP19.84■□□□□ 0.77
FAM3B-205ENST00000479810 NUP153P49790 1475 aaKnown RBP19.83■□□□□ 0.76
FAM3B-205ENST00000479810 PTPRGP23470 1445 aa19.81■□□□□ 0.76
FAM3B-205ENST00000479810 CCNB3Q8WWL7 1395 aa19.8■□□□□ 0.76
FAM3B-205ENST00000479810 CFAP43Q8NDM7 1665 aa19.8■□□□□ 0.76
FAM3B-205ENST00000479810 OSCARQ8IYS5 282 aa19.77■□□□□ 0.76
FAM3B-205ENST00000479810 RAPGEF6Q8TEU7 1601 aa19.75■□□□□ 0.75
FAM3B-205ENST00000479810 HECW1Q76N89 1606 aa19.74■□□□□ 0.75
FAM3B-205ENST00000479810 NCOA2Q15596 1464 aa19.74■□□□□ 0.75
FAM3B-205ENST00000479810 ZNF644Q9H582 1327 aaPredicted RBP19.74■□□□□ 0.75
FAM3B-205ENST00000479810 CHIC2Q9UKJ5 165 aa19.73■□□□□ 0.75
FAM3B-205ENST00000479810 MAP3K1Q13233 1512 aa19.73■□□□□ 0.75
FAM3B-205ENST00000479810 KCNH8Q96L42 1107 aa19.73■□□□□ 0.75
FAM3B-205ENST00000479810 ZNF777Q9ULD5 760 aaPredicted RBP19.73■□□□□ 0.75
FAM3B-205ENST00000479810 RRBP1Q9P2E9 1410 aaKnown RBP19.72■□□□□ 0.75
FAM3B-205ENST00000479810 CLASP1Q7Z460 1538 aa19.68■□□□□ 0.74
FAM3B-205ENST00000479810 ATP10BO94823 1461 aa19.67■□□□□ 0.74
FAM3B-205ENST00000479810 CCDC18Q5T9S5 1454 aa19.66■□□□□ 0.74
FAM3B-205ENST00000479810 PLEKHD1A6NEE1 506 aa19.66■□□□□ 0.74
FAM3B-205ENST00000479810 FGD6Q6ZV73 1430 aa19.64■□□□□ 0.73
FAM3B-205ENST00000479810 CDK11AQ9UQ88 783 aaPredicted RBP19.64■□□□□ 0.73
FAM3B-205ENST00000479810 SHROOM2Q13796 1616 aa19.63■□□□□ 0.73
FAM3B-205ENST00000479810 ABCA8O94911 1581 aa19.62■□□□□ 0.73
FAM3B-205ENST00000479810 UACAQ9BZF9 1416 aa19.61■□□□□ 0.73
FAM3B-205ENST00000479810 EHBP1L1Q8N3D4 1523 aa19.61■□□□□ 0.73
FAM3B-205ENST00000479810 RRP7BPQ9NSQ0 103 aa19.61■□□□□ 0.73
FAM3B-205ENST00000479810 PTPRKQ15262 1439 aa19.6■□□□□ 0.73
FAM3B-205ENST00000479810 MYOM3Q5VTT5 1437 aa19.6■□□□□ 0.73
FAM3B-205ENST00000479810 KIF14Q15058 1648 aa19.6■□□□□ 0.73
FAM3B-205ENST00000479810 SUPT6HQ7KZ85 1726 aaKnown RBP19.59■□□□□ 0.73
FAM3B-205ENST00000479810 CFDP1Q9UEE9 299 aaPredicted RBP19.56■□□□□ 0.72
FAM3B-205ENST00000479810 CYB5RLQ6IPT4 315 aa19.56■□□□□ 0.72
FAM3B-205ENST00000479810 TROQ12816 1431 aaPredicted RBP19.55■□□□□ 0.72
FAM3B-205ENST00000479810 ARHGEF11O15085 1522 aa19.54■□□□□ 0.72
FAM3B-205ENST00000479810 RAB3GAP2Q9H2M9 1393 aa19.53■□□□□ 0.72
FAM3B-205ENST00000479810 PTPN23Q9H3S7 1636 aa19.49■□□□□ 0.71
FAM3B-205ENST00000479810 HNRNPMP52272 730 aaKnown RBP eCLIP19.48■□□□□ 0.71
FAM3B-205ENST00000479810 ABCC2Q92887 1545 aa19.47■□□□□ 0.71
FAM3B-205ENST00000479810 GPATCH8Q9UKJ3 1502 aaKnown RBP19.46■□□□□ 0.71
FAM3B-205ENST00000479810 DHX57Q6P158 1386 aaKnown RBP19.43■□□□□ 0.7
FAM3B-205ENST00000479810 SETD5Q9C0A6 1442 aa19.42■□□□□ 0.7
FAM3B-205ENST00000479810 ADCY10Q96PN6 1610 aa19.41■□□□□ 0.7
FAM3B-205ENST00000479810 ZCCHC11Q5TAX3 1644 aaKnown RBP19.39■□□□□ 0.69
FAM3B-205ENST00000479810 SIN3AQ96ST3 1273 aa19.38■□□□□ 0.69
FAM3B-205ENST00000479810 NEUROD1Q13562 356 aa19.38■□□□□ 0.69
FAM3B-205ENST00000479810 TRIM52Q96A61 297 aa19.37■□□□□ 0.69
FAM3B-205ENST00000479810 ABCC10Q5T3U5 1492 aa19.36■□□□□ 0.69
FAM3B-205ENST00000479810 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
FAM3B-205ENST00000479810 FOXD1Q16676 465 aa19.36■□□□□ 0.69
FAM3B-205ENST00000479810 CAMSAP2Q08AD1 1489 aa19.36■□□□□ 0.69
FAM3B-205ENST00000479810 TTC37Q6PGP7 1564 aa19.36■□□□□ 0.69
FAM3B-205ENST00000479810 ABCC5O15440 1437 aa19.35■□□□□ 0.69
FAM3B-205ENST00000479810 NPM1P06748 294 aaKnown RBP eCLIP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms