RNA–Protein interactions for RNA: ENST00000479810.6

FAM3B-205, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 2,742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-205ENST00000479810 NISCHQ9Y2I1 1504 aa29.38■■■□□ 2.29
FAM3B-205ENST00000479810 CCDC180Q9P1Z9 1646 aa25.27■■□□□ 1.64
FAM3B-205ENST00000479810 DCAF8L2P0C7V8 631 aa25.08■■□□□ 1.61
FAM3B-205ENST00000479810 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.55
FAM3B-205ENST00000479810 ABCC9O60706 1549 aa24.65■■□□□ 1.54
FAM3B-205ENST00000479810 ZCCHC6Q5VYS8 1495 aaKnown RBP24.62■■□□□ 1.53
FAM3B-205ENST00000479810 DCAF1Q9Y4B6 1507 aa23.92■■□□□ 1.42
FAM3B-205ENST00000479810 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
FAM3B-205ENST00000479810 SUPT5HO00267 1087 aaKnown RBP23.73■■□□□ 1.39
FAM3B-205ENST00000479810 NACADO15069 1562 aa23.66■■□□□ 1.38
FAM3B-205ENST00000479810 MYO15BQ96JP2 1530 aa23.56■■□□□ 1.36
FAM3B-205ENST00000479810 RB1CC1Q8TDY2 1594 aa23.55■■□□□ 1.36
FAM3B-205ENST00000479810 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.35
FAM3B-205ENST00000479810 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
FAM3B-205ENST00000479810 CECR2Q9BXF3 1484 aa23.15■■□□□ 1.3
FAM3B-205ENST00000479810 BICRAQ9NZM4 1560 aa23■■□□□ 1.27
FAM3B-205ENST00000479810 RSF1Q96T23 1441 aaPredicted RBP22.94■■□□□ 1.26
FAM3B-205ENST00000479810 MROH2BQ7Z745 1585 aa22.89■■□□□ 1.26
FAM3B-205ENST00000479810 WIZO95785 1651 aa22.72■■□□□ 1.23
FAM3B-205ENST00000479810 BAZ1AQ9NRL2 1556 aaPredicted RBP22.6■■□□□ 1.21
FAM3B-205ENST00000479810 SMARCA4P51532 1647 aa22.57■■□□□ 1.2
FAM3B-205ENST00000479810 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
FAM3B-205ENST00000479810 EIF4G1Q04637 1599 aaKnown RBP22.32■■□□□ 1.16
FAM3B-205ENST00000479810 ATAD2BQ9ULI0 1458 aa22.29■■□□□ 1.16
FAM3B-205ENST00000479810 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
FAM3B-205ENST00000479810 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
FAM3B-205ENST00000479810 BAZ1BQ9UIG0 1483 aaKnown RBP22.18■■□□□ 1.14
FAM3B-205ENST00000479810 DNAJC5BQ9UF47 199 aa22.14■■□□□ 1.13
FAM3B-205ENST00000479810 SMARCA2P51531 1590 aa22.11■■□□□ 1.13
FAM3B-205ENST00000479810 PEG3Q9GZU2 1588 aa22.07■■□□□ 1.12
FAM3B-205ENST00000479810 CC2D2AQ9P2K1 1620 aa22.05■■□□□ 1.12
FAM3B-205ENST00000479810 TRIM41Q8WV44 630 aa22.04■■□□□ 1.12
FAM3B-205ENST00000479810 EHMT2Q96KQ7 1210 aa22.04■■□□□ 1.12
FAM3B-205ENST00000479810 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
FAM3B-205ENST00000479810 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
FAM3B-205ENST00000479810 ABCC8Q09428 1581 aa21.93■■□□□ 1.1
FAM3B-205ENST00000479810 LOC105371045A0A1W2PR82 267 aa21.89■■□□□ 1.1
FAM3B-205ENST00000479810 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
FAM3B-205ENST00000479810 NESP48681 1621 aa21.65■■□□□ 1.06
FAM3B-205ENST00000479810 WRNQ14191 1432 aaPredicted RBP eCLIP21.57■■□□□ 1.04
FAM3B-205ENST00000479810 CADPSQ9ULU8 1353 aa21.54■■□□□ 1.04
FAM3B-205ENST00000479810 CFTRP13569 1480 aa21.53■■□□□ 1.04
FAM3B-205ENST00000479810 SOGA1O94964 1423 aa21.53■■□□□ 1.04
FAM3B-205ENST00000479810 RUSC2Q8N2Y8 1516 aa21.52■■□□□ 1.03
FAM3B-205ENST00000479810 SYNJ1O43426 1573 aa21.51■■□□□ 1.03
FAM3B-205ENST00000479810 CUX1P39880 1505 aa21.35■■□□□ 1.01
FAM3B-205ENST00000479810 FANCD2Q9BXW9 1451 aa21.35■■□□□ 1.01
FAM3B-205ENST00000479810 RANGAP1P46060 587 aaPredicted RBP21.28■■□□□ 1
FAM3B-205ENST00000479810 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
FAM3B-205ENST00000479810 TOP2BQ02880 1626 aa21.23■□□□□ 0.99
FAM3B-205ENST00000479810 UBTFP17480 764 aaKnown RBP21.2■□□□□ 0.98
FAM3B-205ENST00000479810 LAMC3Q9Y6N6 1575 aa21.15■□□□□ 0.98
FAM3B-205ENST00000479810 CEP164Q9UPV0 1460 aa21.14■□□□□ 0.98
FAM3B-205ENST00000479810 RAD54L2Q9Y4B4 1467 aa21.14■□□□□ 0.98
FAM3B-205ENST00000479810 PRDM2Q13029 1718 aa21.14■□□□□ 0.97
FAM3B-205ENST00000479810 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.97
FAM3B-205ENST00000479810 FGD5Q6ZNL6 1462 aa21.14■□□□□ 0.97
FAM3B-205ENST00000479810 PPARGC1BQ86YN6 1023 aaKnown RBP21.12■□□□□ 0.97
FAM3B-205ENST00000479810 BIVM-ERCC5R4GMW8 1640 aa21.12■□□□□ 0.97
FAM3B-205ENST00000479810 PDS5BQ9NTI5 1447 aa21.11■□□□□ 0.97
FAM3B-205ENST00000479810 URB2Q14146 1524 aaKnown RBP21.1■□□□□ 0.97
FAM3B-205ENST00000479810 TOPBP1Q92547 1522 aa21.07■□□□□ 0.96
FAM3B-205ENST00000479810 CUX2O14529 1486 aa21.06■□□□□ 0.96
FAM3B-205ENST00000479810 POLA1P09884 1462 aaPredicted RBP21.02■□□□□ 0.96
FAM3B-205ENST00000479810 TTBK1Q5TCY1 1321 aaPredicted RBP21.01■□□□□ 0.95
FAM3B-205ENST00000479810 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
FAM3B-205ENST00000479810 ERCC6Q03468 1493 aa21■□□□□ 0.95
FAM3B-205ENST00000479810 RAPGEF2Q9Y4G8 1499 aa21■□□□□ 0.95
FAM3B-205ENST00000479810 DNMBPQ6XZF7 1577 aa20.97■□□□□ 0.95
FAM3B-205ENST00000479810 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
FAM3B-205ENST00000479810 EEA1Q15075 1411 aa20.93■□□□□ 0.94
FAM3B-205ENST00000479810 IGF1RP08069 1367 aa20.89■□□□□ 0.93
FAM3B-205ENST00000479810 GOLGA3Q08378 1498 aa20.87■□□□□ 0.93
FAM3B-205ENST00000479810 CEP162Q5TB80 1403 aa20.86■□□□□ 0.93
FAM3B-205ENST00000479810 MRC2Q9UBG0 1479 aa20.84■□□□□ 0.93
FAM3B-205ENST00000479810 AQRO60306 1485 aaKnown RBP eCLIP20.83■□□□□ 0.93
FAM3B-205ENST00000479810 PCGF6Q9BYE7 350 aa20.83■□□□□ 0.93
FAM3B-205ENST00000479810 TNIKQ9UKE5 1360 aa20.8■□□□□ 0.92
FAM3B-205ENST00000479810 CARMIL1Q5VZK9 1371 aa20.78■□□□□ 0.92
FAM3B-205ENST00000479810 PRXQ9BXM0 1461 aa20.78■□□□□ 0.92
FAM3B-205ENST00000479810 ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
FAM3B-205ENST00000479810 ABCA10Q8WWZ4 1543 aa20.77■□□□□ 0.92
FAM3B-205ENST00000479810 P3H3Q8IVL6 736 aa20.75■□□□□ 0.91
FAM3B-205ENST00000479810 KIF21BO75037 1637 aa20.74■□□□□ 0.91
FAM3B-205ENST00000479810 GAPVD1Q14C86 1478 aa20.7■□□□□ 0.9
FAM3B-205ENST00000479810 CLIP1P30622 1438 aa20.68■□□□□ 0.9
FAM3B-205ENST00000479810 TARBP1Q13395 1621 aaKnown RBP20.68■□□□□ 0.9
FAM3B-205ENST00000479810 FBLN2P98095 1184 aa20.67■□□□□ 0.9
FAM3B-205ENST00000479810 WDR62O43379 1518 aa20.65■□□□□ 0.9
FAM3B-205ENST00000479810 THOC2Q8NI27 1593 aaKnown RBP20.65■□□□□ 0.9
FAM3B-205ENST00000479810 WDR97A6NE52 1622 aa20.61■□□□□ 0.89
FAM3B-205ENST00000479810 ABCA5Q8WWZ7 1642 aa20.57■□□□□ 0.88
FAM3B-205ENST00000479810 ERICH3Q5RHP9 1530 aa20.57■□□□□ 0.88
FAM3B-205ENST00000479810 ATP1B4Q9UN42 357 aaPredicted RBP20.55■□□□□ 0.88
FAM3B-205ENST00000479810 IFT140Q96RY7 1462 aa20.53■□□□□ 0.88
FAM3B-205ENST00000479810 ARAP1Q96P48 1450 aa20.5■□□□□ 0.87
FAM3B-205ENST00000479810 EIF4G3O43432 1585 aaKnown RBP20.48■□□□□ 0.87
FAM3B-205ENST00000479810 SNAPC4Q5SXM2 1469 aa20.47■□□□□ 0.87
FAM3B-205ENST00000479810 ARHGAP35Q9NRY4 1499 aa20.46■□□□□ 0.87
FAM3B-205ENST00000479810 TRIM26Q12899 539 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms