RNA–Protein interactions for RNA: ENST00000477491.5

CRIM1-206, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 2

Gene CRIM1, Length 311 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-206ENST00000477491 AQRO60306 1485 aaKnown RBP eCLIP10.36□□□□□ -0.75
CRIM1-206ENST00000477491 ZNF608Q9ULD9 1512 aaPredicted RBP10.34□□□□□ -0.75
CRIM1-206ENST00000477491 PBRM1Q86U86 1689 aa10.33□□□□□ -0.76
CRIM1-206ENST00000477491 VPS8Q8N3P4 1428 aa10.33□□□□□ -0.76
CRIM1-206ENST00000477491 EIF4G3O43432 1585 aaKnown RBP10.32□□□□□ -0.76
CRIM1-206ENST00000477491 ADAMTS12P58397 1594 aa10.32□□□□□ -0.76
CRIM1-206ENST00000477491 RANGAP1P46060 587 aaPredicted RBP10.32□□□□□ -0.76
CRIM1-206ENST00000477491 MAPK8IP2Q13387 824 aaPredicted RBP10.32□□□□□ -0.76
CRIM1-206ENST00000477491 NCBP3Q53F19 620 aaKnown RBP10.32□□□□□ -0.76
CRIM1-206ENST00000477491 MAGI1Q96QZ7 1491 aaPredicted RBP10.31□□□□□ -0.76
CRIM1-206ENST00000477491 APLP2Q06481 763 aa10.31□□□□□ -0.76
CRIM1-206ENST00000477491 SNAPC4Q5SXM2 1469 aa10.3□□□□□ -0.76
CRIM1-206ENST00000477491 TRIM26Q12899 539 aaPredicted RBP10.29□□□□□ -0.76
CRIM1-206ENST00000477491 EFCAB5A4FU69 1503 aa10.28□□□□□ -0.76
CRIM1-206ENST00000477491 DMRT2Q9Y5R5 561 aa10.28□□□□□ -0.76
CRIM1-206ENST00000477491 ARHGAP35Q9NRY4 1499 aa10.28□□□□□ -0.76
CRIM1-206ENST00000477491 CNKSR2Q8WXI2 1034 aa10.27□□□□□ -0.77
CRIM1-206ENST00000477491 CTTNBP2Q8WZ74 1663 aa10.26□□□□□ -0.77
CRIM1-206ENST00000477491 SYNJ2O15056 1496 aa10.26□□□□□ -0.77
CRIM1-206ENST00000477491 ARAP1Q96P48 1450 aa10.26□□□□□ -0.77
CRIM1-206ENST00000477491 CHMP7Q8WUX9 453 aaPredicted RBP10.26□□□□□ -0.77
CRIM1-206ENST00000477491 GRIN2AQ12879 1464 aa10.25□□□□□ -0.77
CRIM1-206ENST00000477491 KIAA0586Q9BVV6 1533 aa10.23□□□□□ -0.77
CRIM1-206ENST00000477491 PCGF6Q9BYE7 350 aa10.22□□□□□ -0.77
CRIM1-206ENST00000477491 IQGAP2Q13576 1575 aa10.22□□□□□ -0.77
CRIM1-206ENST00000477491 FBLN2P98095 1184 aa10.21□□□□□ -0.77
CRIM1-206ENST00000477491 FMN1Q68DA7 1419 aa10.21□□□□□ -0.78
CRIM1-206ENST00000477491 POTEDQ86YR6 584 aa10.19□□□□□ -0.78
CRIM1-206ENST00000477491 NUP160Q12769 1436 aa10.18□□□□□ -0.78
CRIM1-206ENST00000477491 FHOD3Q2V2M9 1422 aa10.18□□□□□ -0.78
CRIM1-206ENST00000477491 P3H3Q8IVL6 736 aa10.18□□□□□ -0.78
CRIM1-206ENST00000477491 SAMD9Q5K651 1589 aa10.18□□□□□ -0.78
CRIM1-206ENST00000477491 UGGT2Q9NYU1 1516 aa10.17□□□□□ -0.78
CRIM1-206ENST00000477491 PPARGC1BQ86YN6 1023 aaKnown RBP10.16□□□□□ -0.78
CRIM1-206ENST00000477491 MAP3K1Q13233 1512 aa10.16□□□□□ -0.78
CRIM1-206ENST00000477491 CASKIN1Q8WXD9 1431 aa10.16□□□□□ -0.78
CRIM1-206ENST00000477491 FYCO1Q9BQS8 1478 aa10.15□□□□□ -0.78
CRIM1-206ENST00000477491 CARMIL2Q6F5E8 1435 aa10.14□□□□□ -0.79
CRIM1-206ENST00000477491 CEP170Q5SW79 1584 aa10.14□□□□□ -0.79
CRIM1-206ENST00000477491 TTBK1Q5TCY1 1321 aaPredicted RBP10.12□□□□□ -0.79
CRIM1-206ENST00000477491 KCNA4P22459 653 aa10.12□□□□□ -0.79
CRIM1-206ENST00000477491 ATP1B4Q9UN42 357 aaPredicted RBP10.12□□□□□ -0.79
CRIM1-206ENST00000477491 PCF11O94913 1555 aaKnown RBP10.11□□□□□ -0.79
CRIM1-206ENST00000477491 JPH4Q96JJ6 628 aa10.11□□□□□ -0.79
CRIM1-206ENST00000477491 TIAM1Q13009 1591 aa10.1□□□□□ -0.79
CRIM1-206ENST00000477491 KIAA0556O60303 1618 aa10.1□□□□□ -0.79
CRIM1-206ENST00000477491 DISP1Q96F81 1524 aa10.08□□□□□ -0.8
CRIM1-206ENST00000477491 RNF216Q9NWF9 866 aaPredicted RBP10.08□□□□□ -0.8
CRIM1-206ENST00000477491 CCDC18Q5T9S5 1454 aa10.08□□□□□ -0.8
CRIM1-206ENST00000477491 KANK4Q5T7N3 995 aaPredicted RBP10.07□□□□□ -0.8
CRIM1-206ENST00000477491 HECW1Q76N89 1606 aa10.07□□□□□ -0.8
CRIM1-206ENST00000477491 CFAP43Q8NDM7 1665 aa10.06□□□□□ -0.8
CRIM1-206ENST00000477491 LRRC9Q6ZRR7 1453 aa10.06□□□□□ -0.8
CRIM1-206ENST00000477491 CHD1O14646 1710 aa10.06□□□□□ -0.8
CRIM1-206ENST00000477491 MTUS2Q5JR59 1369 aa10.04□□□□□ -0.8
CRIM1-206ENST00000477491 PRG4Q92954 1404 aaPredicted RBP10.04□□□□□ -0.8
CRIM1-206ENST00000477491 HOXD11P31277 338 aaPredicted RBP10.03□□□□□ -0.8
CRIM1-206ENST00000477491 NPM3O75607 178 aaKnown RBP10.02□□□□□ -0.81
CRIM1-206ENST00000477491 CDK11AQ9UQ88 783 aaPredicted RBP10.02□□□□□ -0.81
CRIM1-206ENST00000477491 RRBP1Q9P2E9 1410 aaKnown RBP10.01□□□□□ -0.81
CRIM1-206ENST00000477491 EPRSP07814 1512 aaKnown RBP10.01□□□□□ -0.81
CRIM1-206ENST00000477491 EHBP1L1Q8N3D4 1523 aa10.01□□□□□ -0.81
CRIM1-206ENST00000477491 RAPGEF6Q8TEU7 1601 aa10□□□□□ -0.81
CRIM1-206ENST00000477491 PTPRGP23470 1445 aa10□□□□□ -0.81
CRIM1-206ENST00000477491 SHROOM2Q13796 1616 aa10□□□□□ -0.81
CRIM1-206ENST00000477491 CCNB3Q8WWL7 1395 aa10□□□□□ -0.81
CRIM1-206ENST00000477491 CLASP1Q7Z460 1538 aa9.99□□□□□ -0.81
CRIM1-206ENST00000477491 NUP153P49790 1475 aaKnown RBP9.98□□□□□ -0.81
CRIM1-206ENST00000477491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.97□□□□□ -0.81
CRIM1-206ENST00000477491 HNRNPUL2Q1KMD3 747 aaKnown RBP9.97□□□□□ -0.81
CRIM1-206ENST00000477491 OSCARQ8IYS5 282 aa9.97□□□□□ -0.81
CRIM1-206ENST00000477491 PLB1Q6P1J6 1458 aa9.96□□□□□ -0.82
CRIM1-206ENST00000477491 ZEB1P37275 1124 aaPredicted RBP9.95□□□□□ -0.82
CRIM1-206ENST00000477491 PHLDB1Q86UU1 1377 aa9.95□□□□□ -0.82
CRIM1-206ENST00000477491 NCOA2Q15596 1464 aa9.95□□□□□ -0.82
CRIM1-206ENST00000477491 ABCA8O94911 1581 aa9.95□□□□□ -0.82
CRIM1-206ENST00000477491 SUPT6HQ7KZ85 1726 aaKnown RBP9.95□□□□□ -0.82
CRIM1-206ENST00000477491 CDK13Q14004 1512 aaKnown RBP9.94□□□□□ -0.82
CRIM1-206ENST00000477491 UACAQ9BZF9 1416 aa9.94□□□□□ -0.82
CRIM1-206ENST00000477491 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.94□□□□□ -0.82
CRIM1-206ENST00000477491 HRCP23327 699 aa9.94□□□□□ -0.82
CRIM1-206ENST00000477491 ARID3CA6NKF2 412 aa9.93□□□□□ -0.82
CRIM1-206ENST00000477491 TROQ12816 1431 aaPredicted RBP9.92□□□□□ -0.82
CRIM1-206ENST00000477491 MYOM3Q5VTT5 1437 aa9.92□□□□□ -0.82
CRIM1-206ENST00000477491 PLEKHD1A6NEE1 506 aa9.92□□□□□ -0.82
CRIM1-206ENST00000477491 LRRIQ1Q96JM4 1722 aa9.92□□□□□ -0.82
CRIM1-206ENST00000477491 FGD6Q6ZV73 1430 aa9.91□□□□□ -0.82
CRIM1-206ENST00000477491 FAM50AQ14320 339 aaKnown RBP9.91□□□□□ -0.82
CRIM1-206ENST00000477491 ARHGEF11O15085 1522 aa9.91□□□□□ -0.82
CRIM1-206ENST00000477491 MAGI3Q5TCQ9 1506 aa9.9□□□□□ -0.82
CRIM1-206ENST00000477491 MIA2Q96PC5 1412 aa9.9□□□□□ -0.83
CRIM1-206ENST00000477491 ABCC2Q92887 1545 aa9.89□□□□□ -0.83
CRIM1-206ENST00000477491 DCAF8L1A6NGE4 600 aa9.89□□□□□ -0.83
CRIM1-206ENST00000477491 UHRF1BP1LA0JNW5 1464 aa9.89□□□□□ -0.83
CRIM1-206ENST00000477491 ATP10BO94823 1461 aa9.89□□□□□ -0.83
CRIM1-206ENST00000477491 CCER1Q8TC90 406 aaPredicted RBP9.88□□□□□ -0.83
CRIM1-206ENST00000477491 ERCC6L2Q5T890 1561 aa9.87□□□□□ -0.83
CRIM1-206ENST00000477491 ITGAEP38570 1179 aa9.86□□□□□ -0.83
CRIM1-206ENST00000477491 KIF14Q15058 1648 aa9.85□□□□□ -0.83
CRIM1-206ENST00000477491 ADCY10Q96PN6 1610 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms