RNA–Protein interactions for RNA: ENST00000477491.5

CRIM1-206, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 2

Gene CRIM1, Length 311 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-206ENST00000477491 AEBP2Q6ZN18 517 aaPredicted RBP15.05■□□□□ -0
CRIM1-206ENST00000477491 NISCHQ9Y2I1 1504 aa14.88□□□□□ -0.03
CRIM1-206ENST00000477491 CHIC1Q5VXU3 224 aa14.73□□□□□ -0.05
CRIM1-206ENST00000477491 CCDC180Q9P1Z9 1646 aa12.99□□□□□ -0.33
CRIM1-206ENST00000477491 SENP3Q9H4L4 574 aaPredicted RBP12.95□□□□□ -0.34
CRIM1-206ENST00000477491 PHF23Q9BUL5 403 aaPredicted RBP12.85□□□□□ -0.35
CRIM1-206ENST00000477491 ZCCHC6Q5VYS8 1495 aaKnown RBP12.5□□□□□ -0.41
CRIM1-206ENST00000477491 DCAF1Q9Y4B6 1507 aa12.35□□□□□ -0.43
CRIM1-206ENST00000477491 DCAF8L2P0C7V8 631 aa12.31□□□□□ -0.44
CRIM1-206ENST00000477491 ABCC9O60706 1549 aa12.27□□□□□ -0.45
CRIM1-206ENST00000477491 MYO15BQ96JP2 1530 aa12.22□□□□□ -0.45
CRIM1-206ENST00000477491 NACADO15069 1562 aa12.13□□□□□ -0.47
CRIM1-206ENST00000477491 SHROOM4Q9ULL8 1493 aa12.08□□□□□ -0.47
CRIM1-206ENST00000477491 RB1CC1Q8TDY2 1594 aa12.03□□□□□ -0.48
CRIM1-206ENST00000477491 PLPPR3Q6T4P5 718 aa11.99□□□□□ -0.49
CRIM1-206ENST00000477491 FOXD1Q16676 465 aa11.92□□□□□ -0.5
CRIM1-206ENST00000477491 SCRIBQ14160 1630 aa11.89□□□□□ -0.51
CRIM1-206ENST00000477491 SUPT5HO00267 1087 aaKnown RBP11.66□□□□□ -0.54
CRIM1-206ENST00000477491 UNC13AQ9UPW8 1703 aa11.62□□□□□ -0.55
CRIM1-206ENST00000477491 BICRAQ9NZM4 1560 aa11.57□□□□□ -0.56
CRIM1-206ENST00000477491 PABPN1Q86U42 306 aaKnown RBP eCLIP11.56□□□□□ -0.56
CRIM1-206ENST00000477491 RSF1Q96T23 1441 aaPredicted RBP11.53□□□□□ -0.56
CRIM1-206ENST00000477491 BAZ1AQ9NRL2 1556 aaPredicted RBP11.52□□□□□ -0.57
CRIM1-206ENST00000477491 CECR2Q9BXF3 1484 aa11.51□□□□□ -0.57
CRIM1-206ENST00000477491 MROH2BQ7Z745 1585 aa11.45□□□□□ -0.58
CRIM1-206ENST00000477491 SMARCA4P51532 1647 aa11.42□□□□□ -0.58
CRIM1-206ENST00000477491 ADRA2BP18089 450 aa11.38□□□□□ -0.59
CRIM1-206ENST00000477491 PPP6R1Q9UPN7 881 aa11.36□□□□□ -0.59
CRIM1-206ENST00000477491 WIZO95785 1651 aa11.33□□□□□ -0.6
CRIM1-206ENST00000477491 PEG3Q9GZU2 1588 aa11.3□□□□□ -0.6
CRIM1-206ENST00000477491 TOP2AP11388 1531 aaKnown RBP11.3□□□□□ -0.6
CRIM1-206ENST00000477491 SMARCA2P51531 1590 aa11.29□□□□□ -0.6
CRIM1-206ENST00000477491 PIAS4Q8N2W9 510 aaPredicted RBP11.29□□□□□ -0.6
CRIM1-206ENST00000477491 EIF4G1Q04637 1599 aaKnown RBP11.27□□□□□ -0.61
CRIM1-206ENST00000477491 ATAD2BQ9ULI0 1458 aa11.26□□□□□ -0.61
CRIM1-206ENST00000477491 BAZ1BQ9UIG0 1483 aaKnown RBP11.22□□□□□ -0.61
CRIM1-206ENST00000477491 NCAPD3P42695 1498 aa11.19□□□□□ -0.62
CRIM1-206ENST00000477491 HMGXB3Q12766 1538 aa11.17□□□□□ -0.62
CRIM1-206ENST00000477491 MSH5O43196 834 aa11.16□□□□□ -0.62
CRIM1-206ENST00000477491 CCDC88BA6NC98 1476 aa11.15□□□□□ -0.62
CRIM1-206ENST00000477491 CC2D2AQ9P2K1 1620 aa11.09□□□□□ -0.63
CRIM1-206ENST00000477491 TRIM41Q8WV44 630 aa11.02□□□□□ -0.65
CRIM1-206ENST00000477491 CFTRP13569 1480 aa10.93□□□□□ -0.66
CRIM1-206ENST00000477491 CADPSQ9ULU8 1353 aa10.91□□□□□ -0.66
CRIM1-206ENST00000477491 WRNQ14191 1432 aaPredicted RBP eCLIP10.9□□□□□ -0.66
CRIM1-206ENST00000477491 ABCC8Q09428 1581 aa10.87□□□□□ -0.67
CRIM1-206ENST00000477491 LAMC3Q9Y6N6 1575 aa10.81□□□□□ -0.68
CRIM1-206ENST00000477491 PRDM2Q13029 1718 aa10.81□□□□□ -0.68
CRIM1-206ENST00000477491 EEA1Q15075 1411 aa10.79□□□□□ -0.68
CRIM1-206ENST00000477491 PDS5BQ9NTI5 1447 aa10.77□□□□□ -0.68
CRIM1-206ENST00000477491 FANCD2Q9BXW9 1451 aa10.77□□□□□ -0.69
CRIM1-206ENST00000477491 SYNJ1O43426 1573 aa10.77□□□□□ -0.69
CRIM1-206ENST00000477491 TOP2BQ02880 1626 aa10.76□□□□□ -0.69
CRIM1-206ENST00000477491 DNAJC5BQ9UF47 199 aa10.76□□□□□ -0.69
CRIM1-206ENST00000477491 FAM9AQ8IZU1 332 aaPredicted RBP10.75□□□□□ -0.69
CRIM1-206ENST00000477491 BIVM-ERCC5R4GMW8 1640 aa10.74□□□□□ -0.69
CRIM1-206ENST00000477491 CEP164Q9UPV0 1460 aa10.73□□□□□ -0.69
CRIM1-206ENST00000477491 CUX1P39880 1505 aa10.73□□□□□ -0.69
CRIM1-206ENST00000477491 NESP48681 1621 aa10.73□□□□□ -0.69
CRIM1-206ENST00000477491 SOGA1O94964 1423 aa10.69□□□□□ -0.7
CRIM1-206ENST00000477491 CSRNP3Q8WYN3 585 aa10.68□□□□□ -0.7
CRIM1-206ENST00000477491 LOC105371045A0A1W2PR82 267 aa10.67□□□□□ -0.7
CRIM1-206ENST00000477491 DNMBPQ6XZF7 1577 aa10.67□□□□□ -0.7
CRIM1-206ENST00000477491 KIF27Q86VH2 1401 aa10.65□□□□□ -0.7
CRIM1-206ENST00000477491 TOPBP1Q92547 1522 aa10.64□□□□□ -0.71
CRIM1-206ENST00000477491 FGD5Q6ZNL6 1462 aa10.64□□□□□ -0.71
CRIM1-206ENST00000477491 RUSC2Q8N2Y8 1516 aa10.61□□□□□ -0.71
CRIM1-206ENST00000477491 GOLGA3Q08378 1498 aa10.6□□□□□ -0.71
CRIM1-206ENST00000477491 MRC2Q9UBG0 1479 aa10.6□□□□□ -0.71
CRIM1-206ENST00000477491 SCAF1Q9H7N4 1312 aaKnown RBP10.59□□□□□ -0.71
CRIM1-206ENST00000477491 URB2Q14146 1524 aaKnown RBP10.59□□□□□ -0.71
CRIM1-206ENST00000477491 KIF21AQ7Z4S6 1674 aa10.58□□□□□ -0.72
CRIM1-206ENST00000477491 CUX2O14529 1486 aa10.58□□□□□ -0.72
CRIM1-206ENST00000477491 POLA1P09884 1462 aaPredicted RBP10.58□□□□□ -0.72
CRIM1-206ENST00000477491 ERCC6Q03468 1493 aa10.58□□□□□ -0.72
CRIM1-206ENST00000477491 KIF21BO75037 1637 aa10.58□□□□□ -0.72
CRIM1-206ENST00000477491 TNIKQ9UKE5 1360 aa10.56□□□□□ -0.72
CRIM1-206ENST00000477491 UBTFP17480 764 aaKnown RBP10.56□□□□□ -0.72
CRIM1-206ENST00000477491 EHMT2Q96KQ7 1210 aa10.56□□□□□ -0.72
CRIM1-206ENST00000477491 ABCA10Q8WWZ4 1543 aa10.56□□□□□ -0.72
CRIM1-206ENST00000477491 PRXQ9BXM0 1461 aa10.53□□□□□ -0.72
CRIM1-206ENST00000477491 WDR62O43379 1518 aa10.53□□□□□ -0.72
CRIM1-206ENST00000477491 ERICH3Q5RHP9 1530 aa10.53□□□□□ -0.72
CRIM1-206ENST00000477491 RAD54L2Q9Y4B4 1467 aa10.52□□□□□ -0.73
CRIM1-206ENST00000477491 PPP4R3CPQ6ZMV5 832 aa10.51□□□□□ -0.73
CRIM1-206ENST00000477491 IGF1RP08069 1367 aa10.5□□□□□ -0.73
CRIM1-206ENST00000477491 IFT140Q96RY7 1462 aa10.49□□□□□ -0.73
CRIM1-206ENST00000477491 RAPGEF2Q9Y4G8 1499 aa10.49□□□□□ -0.73
CRIM1-206ENST00000477491 CARMIL1Q5VZK9 1371 aa10.48□□□□□ -0.73
CRIM1-206ENST00000477491 CEP162Q5TB80 1403 aa10.47□□□□□ -0.73
CRIM1-206ENST00000477491 GAPVD1Q14C86 1478 aa10.46□□□□□ -0.74
CRIM1-206ENST00000477491 WDR97A6NE52 1622 aa10.46□□□□□ -0.74
CRIM1-206ENST00000477491 THOC2Q8NI27 1593 aaKnown RBP10.45□□□□□ -0.74
CRIM1-206ENST00000477491 TARBP1Q13395 1621 aaKnown RBP10.44□□□□□ -0.74
CRIM1-206ENST00000477491 TDRD9Q8NDG6 1382 aaKnown RBP10.44□□□□□ -0.74
CRIM1-206ENST00000477491 CUL7Q14999 1698 aa10.44□□□□□ -0.74
CRIM1-206ENST00000477491 ABCA5Q8WWZ7 1642 aa10.44□□□□□ -0.74
CRIM1-206ENST00000477491 CLIP1P30622 1438 aa10.41□□□□□ -0.74
CRIM1-206ENST00000477491 GRIN2BQ13224 1484 aa10.4□□□□□ -0.74
CRIM1-206ENST00000477491 FHAD1B1AJZ9 1412 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms