RNA–Protein interactions for RNA: ENST00000469541.5

ITM2A-205, Transcript of integral membrane protein 2A, humanhuman

TSL 2

Gene ITM2A, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-205ENST00000469541 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
ITM2A-205ENST00000469541 RAD54L2Q9Y4B4 1467 aa13.92□□□□□ -0.18
ITM2A-205ENST00000469541 IGF1RP08069 1367 aa13.91□□□□□ -0.18
ITM2A-205ENST00000469541 MRC2Q9UBG0 1479 aa13.91□□□□□ -0.18
ITM2A-205ENST00000469541 RAPGEF2Q9Y4G8 1499 aa13.91□□□□□ -0.18
ITM2A-205ENST00000469541 ABCB7O75027 752 aa13.88□□□□□ -0.19
ITM2A-205ENST00000469541 EHMT2Q96KQ7 1210 aa13.88□□□□□ -0.19
ITM2A-205ENST00000469541 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
ITM2A-205ENST00000469541 WDR62O43379 1518 aa13.86□□□□□ -0.19
ITM2A-205ENST00000469541 CEP162Q5TB80 1403 aa13.86□□□□□ -0.19
ITM2A-205ENST00000469541 ABCA5Q8WWZ7 1642 aa13.83□□□□□ -0.2
ITM2A-205ENST00000469541 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
ITM2A-205ENST00000469541 APLP2Q06481 763 aa13.82□□□□□ -0.2
ITM2A-205ENST00000469541 THOC2Q8NI27 1593 aaKnown RBP13.82□□□□□ -0.2
ITM2A-205ENST00000469541 UBTFP17480 764 aaKnown RBP13.81□□□□□ -0.2
ITM2A-205ENST00000469541 CARMIL1Q5VZK9 1371 aa13.79□□□□□ -0.2
ITM2A-205ENST00000469541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.77□□□□□ -0.21
ITM2A-205ENST00000469541 HNRNPUL2Q1KMD3 747 aaKnown RBP13.77□□□□□ -0.21
ITM2A-205ENST00000469541 CUL7Q14999 1698 aa13.76□□□□□ -0.21
ITM2A-205ENST00000469541 GAPVD1Q14C86 1478 aa13.75□□□□□ -0.21
ITM2A-205ENST00000469541 TDRD9Q8NDG6 1382 aaKnown RBP13.75□□□□□ -0.21
ITM2A-205ENST00000469541 IFT140Q96RY7 1462 aa13.74□□□□□ -0.21
ITM2A-205ENST00000469541 ERCC6Q03468 1493 aa13.74□□□□□ -0.21
ITM2A-205ENST00000469541 CLIP1P30622 1438 aa13.73□□□□□ -0.21
ITM2A-205ENST00000469541 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
ITM2A-205ENST00000469541 PBRM1Q86U86 1689 aa13.68□□□□□ -0.22
ITM2A-205ENST00000469541 ZNF608Q9ULD9 1512 aaPredicted RBP13.68□□□□□ -0.22
ITM2A-205ENST00000469541 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.22
ITM2A-205ENST00000469541 ARAP1Q96P48 1450 aa13.66□□□□□ -0.22
ITM2A-205ENST00000469541 VPS8Q8N3P4 1428 aa13.65□□□□□ -0.22
ITM2A-205ENST00000469541 GRIN2BQ13224 1484 aa13.64□□□□□ -0.23
ITM2A-205ENST00000469541 ARHGAP35Q9NRY4 1499 aa13.64□□□□□ -0.23
ITM2A-205ENST00000469541 ADAMTS12P58397 1594 aa13.63□□□□□ -0.23
ITM2A-205ENST00000469541 FHAD1B1AJZ9 1412 aa13.62□□□□□ -0.23
ITM2A-205ENST00000469541 EIF4G3O43432 1585 aaKnown RBP13.62□□□□□ -0.23
ITM2A-205ENST00000469541 CTTNBP2Q8WZ74 1663 aa13.61□□□□□ -0.23
ITM2A-205ENST00000469541 TRIM26Q12899 539 aaPredicted RBP13.6□□□□□ -0.23
ITM2A-205ENST00000469541 PCGF6Q9BYE7 350 aa13.55□□□□□ -0.24
ITM2A-205ENST00000469541 SNAPC4Q5SXM2 1469 aa13.54□□□□□ -0.24
ITM2A-205ENST00000469541 MAGI1Q96QZ7 1491 aaPredicted RBP13.54□□□□□ -0.24
ITM2A-205ENST00000469541 EFCAB5A4FU69 1503 aa13.54□□□□□ -0.24
ITM2A-205ENST00000469541 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
ITM2A-205ENST00000469541 POLA2Q14181 598 aa13.52□□□□□ -0.25
ITM2A-205ENST00000469541 SAMD9Q5K651 1589 aa13.52□□□□□ -0.25
ITM2A-205ENST00000469541 RANGAP1P46060 587 aaPredicted RBP13.5□□□□□ -0.25
ITM2A-205ENST00000469541 GRIN2AQ12879 1464 aa13.48□□□□□ -0.25
ITM2A-205ENST00000469541 PPARGC1BQ86YN6 1023 aaKnown RBP13.48□□□□□ -0.25
ITM2A-205ENST00000469541 SYNJ2O15056 1496 aa13.48□□□□□ -0.25
ITM2A-205ENST00000469541 MAP3K1Q13233 1512 aa13.47□□□□□ -0.25
ITM2A-205ENST00000469541 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.25
ITM2A-205ENST00000469541 IQGAP2Q13576 1575 aa13.45□□□□□ -0.26
ITM2A-205ENST00000469541 KIAA0586Q9BVV6 1533 aa13.45□□□□□ -0.26
ITM2A-205ENST00000469541 UGGT2Q9NYU1 1516 aa13.45□□□□□ -0.26
ITM2A-205ENST00000469541 NUP160Q12769 1436 aa13.43□□□□□ -0.26
ITM2A-205ENST00000469541 FHOD3Q2V2M9 1422 aa13.43□□□□□ -0.26
ITM2A-205ENST00000469541 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
ITM2A-205ENST00000469541 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
ITM2A-205ENST00000469541 CEP170Q5SW79 1584 aa13.41□□□□□ -0.26
ITM2A-205ENST00000469541 CASKIN1Q8WXD9 1431 aa13.4□□□□□ -0.26
ITM2A-205ENST00000469541 TIAM1Q13009 1591 aa13.39□□□□□ -0.27
ITM2A-205ENST00000469541 FMN1Q68DA7 1419 aa13.39□□□□□ -0.27
ITM2A-205ENST00000469541 FYCO1Q9BQS8 1478 aa13.38□□□□□ -0.27
ITM2A-205ENST00000469541 KANK4Q5T7N3 995 aaPredicted RBP13.38□□□□□ -0.27
ITM2A-205ENST00000469541 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
ITM2A-205ENST00000469541 P3H3Q8IVL6 736 aa13.37□□□□□ -0.27
ITM2A-205ENST00000469541 DISP1Q96F81 1524 aa13.37□□□□□ -0.27
ITM2A-205ENST00000469541 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
ITM2A-205ENST00000469541 KIAA0556O60303 1618 aa13.35□□□□□ -0.27
ITM2A-205ENST00000469541 LRRIQ1Q96JM4 1722 aa13.33□□□□□ -0.28
ITM2A-205ENST00000469541 LRRC9Q6ZRR7 1453 aa13.32□□□□□ -0.28
ITM2A-205ENST00000469541 CHD1O14646 1710 aa13.31□□□□□ -0.28
ITM2A-205ENST00000469541 ATF5Q9Y2D1 282 aaPredicted RBP13.3□□□□□ -0.28
ITM2A-205ENST00000469541 HRCP23327 699 aa13.29□□□□□ -0.28
ITM2A-205ENST00000469541 TTBK1Q5TCY1 1321 aaPredicted RBP13.29□□□□□ -0.28
ITM2A-205ENST00000469541 RRBP1Q9P2E9 1410 aaKnown RBP13.29□□□□□ -0.28
ITM2A-205ENST00000469541 JPH4Q96JJ6 628 aa13.27□□□□□ -0.29
ITM2A-205ENST00000469541 SHROOM2Q13796 1616 aa13.26□□□□□ -0.29
ITM2A-205ENST00000469541 FBLN2P98095 1184 aa13.25□□□□□ -0.29
ITM2A-205ENST00000469541 HECW1Q76N89 1606 aa13.24□□□□□ -0.29
ITM2A-205ENST00000469541 CCDC18Q5T9S5 1454 aa13.23□□□□□ -0.29
ITM2A-205ENST00000469541 EPRSP07814 1512 aaKnown RBP13.22□□□□□ -0.29
ITM2A-205ENST00000469541 MAGI3Q5TCQ9 1506 aa13.22□□□□□ -0.29
ITM2A-205ENST00000469541 CLASP1Q7Z460 1538 aa13.22□□□□□ -0.29
ITM2A-205ENST00000469541 PHLDB1Q86UU1 1377 aa13.21□□□□□ -0.29
ITM2A-205ENST00000469541 CARMIL2Q6F5E8 1435 aa13.21□□□□□ -0.3
ITM2A-205ENST00000469541 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.3
ITM2A-205ENST00000469541 ARHGEF11O15085 1522 aa13.2□□□□□ -0.3
ITM2A-205ENST00000469541 AKT1S1Q96B36 256 aa13.2□□□□□ -0.3
ITM2A-205ENST00000469541 NUP153P49790 1475 aaKnown RBP13.2□□□□□ -0.3
ITM2A-205ENST00000469541 EHBP1L1Q8N3D4 1523 aa13.18□□□□□ -0.3
ITM2A-205ENST00000469541 ABCA8O94911 1581 aa13.18□□□□□ -0.3
ITM2A-205ENST00000469541 CCNB3Q8WWL7 1395 aa13.18□□□□□ -0.3
ITM2A-205ENST00000469541 PRG4Q92954 1404 aaPredicted RBP13.17□□□□□ -0.3
ITM2A-205ENST00000469541 CDK13Q14004 1512 aaKnown RBP13.15□□□□□ -0.3
ITM2A-205ENST00000469541 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
ITM2A-205ENST00000469541 ATP1B4Q9UN42 357 aaPredicted RBP13.15□□□□□ -0.3
ITM2A-205ENST00000469541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.15□□□□□ -0.3
ITM2A-205ENST00000469541 PLB1Q6P1J6 1458 aa13.15□□□□□ -0.3
ITM2A-205ENST00000469541 SLC4A1APQ9BWU0 796 aaKnown RBP13.14□□□□□ -0.31
ITM2A-205ENST00000469541 NCOA2Q15596 1464 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms