RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 EFCAB5A4FU69 1503 aa26.67■■□□□ 1.86
SMC6-206ENST00000446852 THOC2Q8NI27 1593 aaKnown RBP26.66■■□□□ 1.86
SMC6-206ENST00000446852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.65■■□□□ 1.86
SMC6-206ENST00000446852 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
SMC6-206ENST00000446852 ADAMTS12P58397 1594 aa26.61■■□□□ 1.85
SMC6-206ENST00000446852 ZNF608Q9ULD9 1512 aaPredicted RBP26.61■■□□□ 1.85
SMC6-206ENST00000446852 PCF11O94913 1555 aaKnown RBP26.61■■□□□ 1.85
SMC6-206ENST00000446852 FHOD3Q2V2M9 1422 aa26.6■■□□□ 1.85
SMC6-206ENST00000446852 TIAM1Q13009 1591 aa26.59■■□□□ 1.85
SMC6-206ENST00000446852 P3H3Q8IVL6 736 aa26.59■■□□□ 1.85
SMC6-206ENST00000446852 FHAD1B1AJZ9 1412 aa26.58■■□□□ 1.85
SMC6-206ENST00000446852 GRIN2BQ13224 1484 aa26.57■■□□□ 1.84
SMC6-206ENST00000446852 MAP3K1Q13233 1512 aa26.57■■□□□ 1.84
SMC6-206ENST00000446852 SAMD9Q5K651 1589 aa26.56■■□□□ 1.84
SMC6-206ENST00000446852 CCER1Q8TC90 406 aaPredicted RBP26.54■■□□□ 1.84
SMC6-206ENST00000446852 CFAP43Q8NDM7 1665 aa26.53■■□□□ 1.84
SMC6-206ENST00000446852 EIF4G3O43432 1585 aaKnown RBP26.52■■□□□ 1.84
SMC6-206ENST00000446852 HNRNPUL2Q1KMD3 747 aaKnown RBP26.5■■□□□ 1.83
SMC6-206ENST00000446852 FYCO1Q9BQS8 1478 aa26.47■■□□□ 1.83
SMC6-206ENST00000446852 CASKIN1Q8WXD9 1431 aa26.44■■□□□ 1.82
SMC6-206ENST00000446852 RRBP1Q9P2E9 1410 aaKnown RBP26.44■■□□□ 1.82
SMC6-206ENST00000446852 LRRC9Q6ZRR7 1453 aa26.44■■□□□ 1.82
SMC6-206ENST00000446852 FMN1Q68DA7 1419 aa26.42■■□□□ 1.82
SMC6-206ENST00000446852 IQGAP2Q13576 1575 aa26.41■■□□□ 1.82
SMC6-206ENST00000446852 SNAPC4Q5SXM2 1469 aa26.41■■□□□ 1.82
SMC6-206ENST00000446852 LRRIQ1Q96JM4 1722 aa26.36■■□□□ 1.81
SMC6-206ENST00000446852 ATP1B4Q9UN42 357 aaPredicted RBP26.34■■□□□ 1.81
SMC6-206ENST00000446852 CCNB3Q8WWL7 1395 aa26.32■■□□□ 1.8
SMC6-206ENST00000446852 GRIN2AQ12879 1464 aa26.3■■□□□ 1.8
SMC6-206ENST00000446852 MAGI1Q96QZ7 1491 aaPredicted RBP26.29■■□□□ 1.8
SMC6-206ENST00000446852 PHLDB1Q86UU1 1377 aa26.26■■□□□ 1.79
SMC6-206ENST00000446852 UGGT2Q9NYU1 1516 aa26.26■■□□□ 1.79
SMC6-206ENST00000446852 KIAA0586Q9BVV6 1533 aa26.23■■□□□ 1.79
SMC6-206ENST00000446852 SYNJ2O15056 1496 aa26.21■■□□□ 1.79
SMC6-206ENST00000446852 CEP170Q5SW79 1584 aa26.17■■□□□ 1.78
SMC6-206ENST00000446852 KIAA0556O60303 1618 aa26.16■■□□□ 1.78
SMC6-206ENST00000446852 DISP1Q96F81 1524 aa26.14■■□□□ 1.78
SMC6-206ENST00000446852 HECW1Q76N89 1606 aa26.14■■□□□ 1.78
SMC6-206ENST00000446852 CHMP7Q8WUX9 453 aaPredicted RBP26.11■■□□□ 1.77
SMC6-206ENST00000446852 MTUS2Q5JR59 1369 aa26.1■■□□□ 1.77
SMC6-206ENST00000446852 CCDC18Q5T9S5 1454 aa26.09■■□□□ 1.77
SMC6-206ENST00000446852 ITGAEP38570 1179 aa26.09■■□□□ 1.77
SMC6-206ENST00000446852 EHBP1L1Q8N3D4 1523 aa26.07■■□□□ 1.76
SMC6-206ENST00000446852 MAGI3Q5TCQ9 1506 aa26.07■■□□□ 1.76
SMC6-206ENST00000446852 SUPT6HQ7KZ85 1726 aaKnown RBP26.06■■□□□ 1.76
SMC6-206ENST00000446852 NUP160Q12769 1436 aa26.05■■□□□ 1.76
SMC6-206ENST00000446852 FBLN2P98095 1184 aa26.04■■□□□ 1.76
SMC6-206ENST00000446852 EPRSP07814 1512 aaKnown RBP26.04■■□□□ 1.76
SMC6-206ENST00000446852 DHX57Q6P158 1386 aaKnown RBP26.03■■□□□ 1.76
SMC6-206ENST00000446852 NCOA2Q15596 1464 aa26.02■■□□□ 1.76
SMC6-206ENST00000446852 FAM50AQ14320 339 aaKnown RBP26.02■■□□□ 1.76
SMC6-206ENST00000446852 FGD6Q6ZV73 1430 aa26.01■■□□□ 1.75
SMC6-206ENST00000446852 CDK13Q14004 1512 aaKnown RBP26.01■■□□□ 1.75
SMC6-206ENST00000446852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.98■■□□□ 1.756e-7■■■□□ 19.2
SMC6-206ENST00000446852 ARHGEF11O15085 1522 aa25.98■■□□□ 1.75
SMC6-206ENST00000446852 RAPGEF6Q8TEU7 1601 aa25.96■■□□□ 1.75
SMC6-206ENST00000446852 MYOM3Q5VTT5 1437 aa25.94■■□□□ 1.74
SMC6-206ENST00000446852 RAB3GAP2Q9H2M9 1393 aa25.93■■□□□ 1.74
SMC6-206ENST00000446852 NUP153P49790 1475 aaKnown RBP25.92■■□□□ 1.74
SMC6-206ENST00000446852 CLSPNQ9HAW4 1339 aa25.91■■□□□ 1.74
SMC6-206ENST00000446852 CHD1O14646 1710 aa25.9■■□□□ 1.74
SMC6-206ENST00000446852 SETD5Q9C0A6 1442 aa25.89■■□□□ 1.74
SMC6-206ENST00000446852 ARID3CA6NKF2 412 aa25.88■■□□□ 1.73
SMC6-206ENST00000446852 JPH4Q96JJ6 628 aa25.87■■□□□ 1.73
SMC6-206ENST00000446852 PTPN23Q9H3S7 1636 aa25.86■■□□□ 1.73
SMC6-206ENST00000446852 CARMIL2Q6F5E8 1435 aa25.85■■□□□ 1.73
SMC6-206ENST00000446852 PLB1Q6P1J6 1458 aa25.82■■□□□ 1.72
SMC6-206ENST00000446852 PTPRKQ15262 1439 aa25.79■■□□□ 1.72
SMC6-206ENST00000446852 MAPKBP1O60336 1514 aa25.77■■□□□ 1.72
SMC6-206ENST00000446852 TCOF1Q13428 1488 aaKnown RBP25.77■■□□□ 1.72
SMC6-206ENST00000446852 ABCA8O94911 1581 aa25.72■■□□□ 1.71
SMC6-206ENST00000446852 MIA2Q96PC5 1412 aa25.7■■□□□ 1.7
SMC6-206ENST00000446852 HFM1A2PYH4 1435 aa25.69■■□□□ 1.7
SMC6-206ENST00000446852 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
SMC6-206ENST00000446852 SHROOM2Q13796 1616 aa25.67■■□□□ 1.7
SMC6-206ENST00000446852 TROQ12816 1431 aaPredicted RBP25.66■■□□□ 1.7
SMC6-206ENST00000446852 CDK11AQ9UQ88 783 aaPredicted RBP25.65■■□□□ 1.7
SMC6-206ENST00000446852 ADCY10Q96PN6 1610 aa25.65■■□□□ 1.7
SMC6-206ENST00000446852 ZNF316A6NFI3 1004 aaPredicted RBP25.64■■□□□ 1.7
SMC6-206ENST00000446852 NAIPQ13075 1403 aa25.63■■□□□ 1.69
SMC6-206ENST00000446852 KIF14Q15058 1648 aa25.63■■□□□ 1.69
SMC6-206ENST00000446852 GCC2Q8IWJ2 1684 aa25.6■■□□□ 1.69
SMC6-206ENST00000446852 ITSN2Q9NZM3 1697 aa25.57■■□□□ 1.68
SMC6-206ENST00000446852 ATP10BO94823 1461 aa25.57■■□□□ 1.68
SMC6-206ENST00000446852 DIEXFQ68CQ4 756 aaKnown RBP25.56■■□□□ 1.68
SMC6-206ENST00000446852 PTPRGP23470 1445 aa25.56■■□□□ 1.68
SMC6-206ENST00000446852 DNMT1P26358 1616 aaKnown RBP25.54■■□□□ 1.68
SMC6-206ENST00000446852 ERCC6L2Q5T890 1561 aa25.53■■□□□ 1.68
SMC6-206ENST00000446852 AKNAQ7Z591 1439 aa25.52■■□□□ 1.68
SMC6-206ENST00000446852 UACAQ9BZF9 1416 aa25.52■■□□□ 1.68
SMC6-206ENST00000446852 CHIC2Q9UKJ5 165 aa25.52■■□□□ 1.68
SMC6-206ENST00000446852 CLASP1Q7Z460 1538 aa25.51■■□□□ 1.67
SMC6-206ENST00000446852 GPATCH8Q9UKJ3 1502 aaKnown RBP25.5■■□□□ 1.67
SMC6-206ENST00000446852 ZNF644Q9H582 1327 aaPredicted RBP25.5■■□□□ 1.67
SMC6-206ENST00000446852 DAPK1P53355 1430 aa25.49■■□□□ 1.67
SMC6-206ENST00000446852 KDM6BO15054 1643 aa25.49■■□□□ 1.67
SMC6-206ENST00000446852 CDC42BPAQ5VT25 1732 aa25.48■■□□□ 1.67
SMC6-206ENST00000446852 RRP7BPQ9NSQ0 103 aa25.48■■□□□ 1.67
SMC6-206ENST00000446852 CAMSAP2Q08AD1 1489 aa25.46■■□□□ 1.67
SMC6-206ENST00000446852 ABCC5O15440 1437 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms