RNA–Protein interactions for RNA: ENST00000444184.5

LINC00963-205, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 1,887 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-205ENST00000444184 ZNF608Q9ULD9 1512 aaPredicted RBP29.64■■■□□ 2.33
LINC00963-205ENST00000444184 GRIN2BQ13224 1484 aa29.55■■■□□ 2.32
LINC00963-205ENST00000444184 EIF4G3O43432 1585 aaKnown RBP29.54■■■□□ 2.32
LINC00963-205ENST00000444184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.53■■■□□ 2.32
LINC00963-205ENST00000444184 KANK4Q5T7N3 995 aaPredicted RBP29.5■■■□□ 2.31
LINC00963-205ENST00000444184 ADAMTS12P58397 1594 aa29.49■■■□□ 2.31
LINC00963-205ENST00000444184 CCER1Q8TC90 406 aaPredicted RBP29.48■■■□□ 2.31
LINC00963-205ENST00000444184 CTTNBP2Q8WZ74 1663 aa29.47■■■□□ 2.31
LINC00963-205ENST00000444184 FHAD1B1AJZ9 1412 aa29.46■■■□□ 2.31
LINC00963-205ENST00000444184 P3H3Q8IVL6 736 aa29.46■■■□□ 2.31
LINC00963-205ENST00000444184 EFCAB5A4FU69 1503 aa29.43■■■□□ 2.3
LINC00963-205ENST00000444184 HNRNPUL2Q1KMD3 747 aaKnown RBP29.39■■■□□ 2.3
LINC00963-205ENST00000444184 FHOD3Q2V2M9 1422 aa29.37■■■□□ 2.29
LINC00963-205ENST00000444184 SNAPC4Q5SXM2 1469 aa29.37■■■□□ 2.29
LINC00963-205ENST00000444184 MAP3K1Q13233 1512 aa29.36■■■□□ 2.29
LINC00963-205ENST00000444184 MAGI1Q96QZ7 1491 aaPredicted RBP29.31■■■□□ 2.28
LINC00963-205ENST00000444184 TIAM1Q13009 1591 aa29.31■■■□□ 2.28
LINC00963-205ENST00000444184 PCF11O94913 1555 aaKnown RBP29.26■■■□□ 2.27
LINC00963-205ENST00000444184 ATP1B4Q9UN42 357 aaPredicted RBP29.25■■■□□ 2.27
LINC00963-205ENST00000444184 FMN1Q68DA7 1419 aa29.23■■■□□ 2.27
LINC00963-205ENST00000444184 CASKIN1Q8WXD9 1431 aa29.23■■■□□ 2.27
LINC00963-205ENST00000444184 FYCO1Q9BQS8 1478 aa29.23■■■□□ 2.27
LINC00963-205ENST00000444184 RRBP1Q9P2E9 1410 aaKnown RBP29.22■■■□□ 2.27
LINC00963-205ENST00000444184 SAMD9Q5K651 1589 aa29.22■■■□□ 2.27
LINC00963-205ENST00000444184 GRIN2AQ12879 1464 aa29.21■■■□□ 2.27
LINC00963-205ENST00000444184 SYNJ2O15056 1496 aa29.2■■■□□ 2.27
LINC00963-205ENST00000444184 LRRC9Q6ZRR7 1453 aa29.2■■■□□ 2.27
LINC00963-205ENST00000444184 CFAP43Q8NDM7 1665 aa29.15■■■□□ 2.26
LINC00963-205ENST00000444184 CCNB3Q8WWL7 1395 aa29.14■■■□□ 2.25
LINC00963-205ENST00000444184 IQGAP2Q13576 1575 aa29.14■■■□□ 2.25
LINC00963-205ENST00000444184 CHMP7Q8WUX9 453 aaPredicted RBP29.08■■■□□ 2.25
LINC00963-205ENST00000444184 KIAA0586Q9BVV6 1533 aa29.07■■■□□ 2.24
LINC00963-205ENST00000444184 CEP170Q5SW79 1584 aa29.04■■■□□ 2.24
LINC00963-205ENST00000444184 PHLDB1Q86UU1 1377 aa29.01■■■□□ 2.23
LINC00963-205ENST00000444184 NUP160Q12769 1436 aa29.01■■■□□ 2.23
LINC00963-205ENST00000444184 UGGT2Q9NYU1 1516 aa29.01■■■□□ 2.23
LINC00963-205ENST00000444184 FBLN2P98095 1184 aa28.98■■■□□ 2.23
LINC00963-205ENST00000444184 ITGAEP38570 1179 aa28.93■■■□□ 2.22
LINC00963-205ENST00000444184 MTUS2Q5JR59 1369 aa28.92■■■□□ 2.22
LINC00963-205ENST00000444184 CHD1O14646 1710 aa28.91■■■□□ 2.22
LINC00963-205ENST00000444184 DISP1Q96F81 1524 aa28.88■■■□□ 2.21
LINC00963-205ENST00000444184 FAM50AQ14320 339 aaKnown RBP28.87■■■□□ 2.21
LINC00963-205ENST00000444184 LRRIQ1Q96JM4 1722 aa28.86■■■□□ 2.21
LINC00963-205ENST00000444184 KIAA0556O60303 1618 aa28.85■■■□□ 2.21
LINC00963-205ENST00000444184 CCDC18Q5T9S5 1454 aa28.84■■■□□ 2.21
LINC00963-205ENST00000444184 HECW1Q76N89 1606 aa28.82■■■□□ 2.2
LINC00963-205ENST00000444184 DHX57Q6P158 1386 aaKnown RBP28.78■■■□□ 2.2
LINC00963-205ENST00000444184 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.77■■■□□ 2.2
LINC00963-205ENST00000444184 CLSPNQ9HAW4 1339 aa28.76■■■□□ 2.2
LINC00963-205ENST00000444184 EHBP1L1Q8N3D4 1523 aa28.76■■■□□ 2.19
LINC00963-205ENST00000444184 JPH4Q96JJ6 628 aa28.74■■■□□ 2.19
LINC00963-205ENST00000444184 EPRSP07814 1512 aaKnown RBP28.74■■■□□ 2.19
LINC00963-205ENST00000444184 NCOA2Q15596 1464 aa28.74■■■□□ 2.19
LINC00963-205ENST00000444184 FGD6Q6ZV73 1430 aa28.74■■■□□ 2.19
LINC00963-205ENST00000444184 SUPT6HQ7KZ85 1726 aaKnown RBP28.71■■■□□ 2.19
LINC00963-205ENST00000444184 SETD5Q9C0A6 1442 aa28.69■■■□□ 2.18
LINC00963-205ENST00000444184 RAB3GAP2Q9H2M9 1393 aa28.68■■■□□ 2.18
LINC00963-205ENST00000444184 MAGI3Q5TCQ9 1506 aa28.68■■■□□ 2.18
LINC00963-205ENST00000444184 MYOM3Q5VTT5 1437 aa28.67■■■□□ 2.18
LINC00963-205ENST00000444184 CARMIL2Q6F5E8 1435 aa28.66■■■□□ 2.18
LINC00963-205ENST00000444184 CDK13Q14004 1512 aaKnown RBP28.65■■■□□ 2.18
LINC00963-205ENST00000444184 ARID3CA6NKF2 412 aa28.64■■■□□ 2.18
LINC00963-205ENST00000444184 SHROOM2Q13796 1616 aa28.63■■■□□ 2.17
LINC00963-205ENST00000444184 ARHGEF11O15085 1522 aa28.62■■■□□ 2.17
LINC00963-205ENST00000444184 RAPGEF6Q8TEU7 1601 aa28.59■■■□□ 2.17
LINC00963-205ENST00000444184 CLASP1Q7Z460 1538 aa28.59■■■□□ 2.17
LINC00963-205ENST00000444184 PRG4Q92954 1404 aaPredicted RBP28.57■■■□□ 2.16
LINC00963-205ENST00000444184 NUP153P49790 1475 aaKnown RBP28.57■■■□□ 2.16
LINC00963-205ENST00000444184 CDK11AQ9UQ88 783 aaPredicted RBP28.53■■■□□ 2.16
LINC00963-205ENST00000444184 ZNF316A6NFI3 1004 aaPredicted RBP28.5■■■□□ 2.15
LINC00963-205ENST00000444184 PTPN23Q9H3S7 1636 aa28.5■■■□□ 2.15
LINC00963-205ENST00000444184 PLB1Q6P1J6 1458 aa28.48■■■□□ 2.15
LINC00963-205ENST00000444184 PTPRKQ15262 1439 aa28.46■■■□□ 2.15
LINC00963-205ENST00000444184 TCOF1Q13428 1488 aaKnown RBP28.45■■■□□ 2.14
LINC00963-205ENST00000444184 MIA2Q96PC5 1412 aa28.44■■■□□ 2.14
LINC00963-205ENST00000444184 ABCA8O94911 1581 aa28.44■■■□□ 2.14
LINC00963-205ENST00000444184 ERCC6L2Q5T890 1561 aa28.43■■■□□ 2.14
LINC00963-205ENST00000444184 DIEXFQ68CQ4 756 aaKnown RBP28.4■■■□□ 2.14
LINC00963-205ENST00000444184 HFM1A2PYH4 1435 aa28.4■■■□□ 2.14
LINC00963-205ENST00000444184 MAPKBP1O60336 1514 aa28.39■■■□□ 2.13
LINC00963-205ENST00000444184 PTPRGP23470 1445 aa28.38■■■□□ 2.13
LINC00963-205ENST00000444184 TROQ12816 1431 aaPredicted RBP28.36■■■□□ 2.13
LINC00963-205ENST00000444184 NAIPQ13075 1403 aa28.32■■■□□ 2.12
LINC00963-205ENST00000444184 CHIC2Q9UKJ5 165 aa28.28■■■□□ 2.12
LINC00963-205ENST00000444184 PLEKHD1A6NEE1 506 aa28.26■■■□□ 2.11
LINC00963-205ENST00000444184 ATP10BO94823 1461 aa28.24■■■□□ 2.11
LINC00963-205ENST00000444184 RRP7BPQ9NSQ0 103 aa28.24■■■□□ 2.11
LINC00963-205ENST00000444184 UACAQ9BZF9 1416 aa28.24■■■□□ 2.11
LINC00963-205ENST00000444184 OSCARQ8IYS5 282 aa28.23■■■□□ 2.11
LINC00963-205ENST00000444184 ADCY10Q96PN6 1610 aa28.21■■■□□ 2.11
LINC00963-205ENST00000444184 AKNAQ7Z591 1439 aa28.21■■■□□ 2.11
LINC00963-205ENST00000444184 SIN3AQ96ST3 1273 aa28.2■■■□□ 2.1
LINC00963-205ENST00000444184 CFDP1Q9UEE9 299 aaPredicted RBP28.19■■■□□ 2.1
LINC00963-205ENST00000444184 ZNF644Q9H582 1327 aaPredicted RBP28.19■■■□□ 2.1
LINC00963-205ENST00000444184 NEUROD1Q13562 356 aa28.19■■■□□ 2.1
LINC00963-205ENST00000444184 ABCC2Q92887 1545 aa28.18■■■□□ 2.1
LINC00963-205ENST00000444184 KIF14Q15058 1648 aa28.17■■■□□ 2.1
LINC00963-205ENST00000444184 GPATCH8Q9UKJ3 1502 aaKnown RBP28.17■■■□□ 2.1
LINC00963-205ENST00000444184 DAPK1P53355 1430 aa28.17■■■□□ 2.1
LINC00963-205ENST00000444184 TIMELESSQ9UNS1 1208 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms